RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
HNF4A-209ENST00000619550 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
HNF4A-209ENST00000619550 SMC4Q9NTJ3 1288 aa13.63□□□□□ -0.23
HNF4A-209ENST00000619550 NCOA2Q15596 1464 aa13.63□□□□□ -0.23
HNF4A-209ENST00000619550 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
HNF4A-209ENST00000619550 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
HNF4A-209ENST00000619550 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
HNF4A-209ENST00000619550 COG6Q9Y2V7 657 aa13.62□□□□□ -0.23
HNF4A-209ENST00000619550 KIAA0586Q9BVV6 1533 aa13.62□□□□□ -0.23
HNF4A-209ENST00000619550 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
HNF4A-209ENST00000619550 ZNF771Q7L3S4 317 aaPredicted RBP13.61□□□□□ -0.23
HNF4A-209ENST00000619550 ZMYND15Q9H091 742 aa13.61□□□□□ -0.23
HNF4A-209ENST00000619550 AMPHP49418 695 aa13.6□□□□□ -0.23
HNF4A-209ENST00000619550 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
HNF4A-209ENST00000619550 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
HNF4A-209ENST00000619550 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
HNF4A-209ENST00000619550 AAMPQ13685 434 aa13.6□□□□□ -0.23
HNF4A-209ENST00000619550 PHF14O94880 888 aa13.6□□□□□ -0.23
HNF4A-209ENST00000619550 TAF3Q5VWG9 929 aa13.6□□□□□ -0.23
HNF4A-209ENST00000619550 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
HNF4A-209ENST00000619550 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
HNF4A-209ENST00000619550 C11orf95C9JLR9 678 aaPredicted RBP13.59□□□□□ -0.23
HNF4A-209ENST00000619550 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
HNF4A-209ENST00000619550 ST18O60284 1047 aa13.58□□□□□ -0.24
HNF4A-209ENST00000619550 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
HNF4A-209ENST00000619550 TRAK2O60296 914 aa13.58□□□□□ -0.24
HNF4A-209ENST00000619550 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
HNF4A-209ENST00000619550 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
HNF4A-209ENST00000619550 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
HNF4A-209ENST00000619550 APAF1O14727 1248 aa13.56□□□□□ -0.24
HNF4A-209ENST00000619550 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
HNF4A-209ENST00000619550 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
HNF4A-209ENST00000619550 COG3Q96JB2 828 aa13.56□□□□□ -0.24
HNF4A-209ENST00000619550 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
HNF4A-209ENST00000619550 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
HNF4A-209ENST00000619550 KCNJ4P48050 445 aa13.55□□□□□ -0.24
HNF4A-209ENST00000619550 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
HNF4A-209ENST00000619550 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
HNF4A-209ENST00000619550 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
HNF4A-209ENST00000619550 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.24
HNF4A-209ENST00000619550 APBB1O00213 710 aa13.52□□□□□ -0.24
HNF4A-209ENST00000619550 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.25
HNF4A-209ENST00000619550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.52□□□□□ -0.25
HNF4A-209ENST00000619550 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.25
HNF4A-209ENST00000619550 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
HNF4A-209ENST00000619550 GOLGA6L1Q8N7Z2 621 aa13.52□□□□□ -0.25
HNF4A-209ENST00000619550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.252e-7■□□□□ 10.3
HNF4A-209ENST00000619550 HTATSF1O43719 755 aaKnown RBP13.51□□□□□ -0.25
HNF4A-209ENST00000619550 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
HNF4A-209ENST00000619550 DDX19BQ9UMR2 479 aa13.51□□□□□ -0.25
HNF4A-209ENST00000619550 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
HNF4A-209ENST00000619550 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
HNF4A-209ENST00000619550 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
HNF4A-209ENST00000619550 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
HNF4A-209ENST00000619550 NUCB2P80303 420 aa13.5□□□□□ -0.25
HNF4A-209ENST00000619550 FGD1P98174 961 aa13.5□□□□□ -0.25
HNF4A-209ENST00000619550 NUTM2FA1L443 756 aa13.5□□□□□ -0.25
HNF4A-209ENST00000619550 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
HNF4A-209ENST00000619550 ESPNB1AK53 854 aa13.49□□□□□ -0.25
HNF4A-209ENST00000619550 NBPF8Q3BBV2 869 aa13.49□□□□□ -0.25
HNF4A-209ENST00000619550 ANKRD45Q5TZF3 282 aa13.49□□□□□ -0.25
HNF4A-209ENST00000619550 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
HNF4A-209ENST00000619550 TIAM1Q13009 1591 aa13.49□□□□□ -0.25
HNF4A-209ENST00000619550 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
HNF4A-209ENST00000619550 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
HNF4A-209ENST00000619550 C9orf84Q5VXU9 1444 aa13.48□□□□□ -0.25
HNF4A-209ENST00000619550 HMMRO75330 724 aa13.48□□□□□ -0.25
HNF4A-209ENST00000619550 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
HNF4A-209ENST00000619550 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
HNF4A-209ENST00000619550 MAP3K1Q13233 1512 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 POGZQ7Z3K3 1410 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 TEX35Q5T0J7 233 aa13.47□□□□□ -0.25
HNF4A-209ENST00000619550 THEMISQ8N1K5 641 aaPredicted RBP13.46□□□□□ -0.25
HNF4A-209ENST00000619550 PANK1Q8TE04 598 aa13.46□□□□□ -0.25
HNF4A-209ENST00000619550 MCM4P33991 863 aa13.46□□□□□ -0.26
HNF4A-209ENST00000619550 TMX4Q9H1E5 349 aaPredicted RBP13.46□□□□□ -0.26
HNF4A-209ENST00000619550 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
HNF4A-209ENST00000619550 PSME1Q06323 249 aa13.45□□□□□ -0.26
HNF4A-209ENST00000619550 FOXD4L5Q5VV16 416 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-209ENST00000619550 FOXD4L4Q8WXT5 416 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-209ENST00000619550 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-209ENST00000619550 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-209ENST00000619550 ATF3P18847 181 aa13.44□□□□□ -0.26
HNF4A-209ENST00000619550 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
HNF4A-209ENST00000619550 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
HNF4A-209ENST00000619550 APPP05067 770 aa13.43□□□□□ -0.26
HNF4A-209ENST00000619550 GPS2Q13227 327 aa13.43□□□□□ -0.26
HNF4A-209ENST00000619550 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
HNF4A-209ENST00000619550 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
HNF4A-209ENST00000619550 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
HNF4A-209ENST00000619550 REC8O95072 547 aa13.42□□□□□ -0.26
HNF4A-209ENST00000619550 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
HNF4A-209ENST00000619550 EVA1CP58658 441 aa13.42□□□□□ -0.26
HNF4A-209ENST00000619550 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
HNF4A-209ENST00000619550 ZNF330Q9Y3S2 320 aaPredicted RBP13.42□□□□□ -0.26
HNF4A-209ENST00000619550 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms