RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 RPGRIP1LQ68CZ1 1315 aa17.67■□□□□ 0.42
TNFAIP3-209ENST00000619035 SYNMO15061 1565 aa17.67■□□□□ 0.42
TNFAIP3-209ENST00000619035 KIAA1210Q9ULL0 1709 aa17.65■□□□□ 0.42
TNFAIP3-209ENST00000619035 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
TNFAIP3-209ENST00000619035 CLTCQ00610 1675 aaKnown RBP17.64■□□□□ 0.42
TNFAIP3-209ENST00000619035 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
TNFAIP3-209ENST00000619035 FBXO31Q5XUX0 539 aaPredicted RBP17.63■□□□□ 0.41
TNFAIP3-209ENST00000619035 ERVK-7P63135 1459 aa17.62■□□□□ 0.41
TNFAIP3-209ENST00000619035 NRXN1Q9ULB1 1477 aa17.62■□□□□ 0.41
TNFAIP3-209ENST00000619035 IDI1Q13907 227 aa17.61■□□□□ 0.41
TNFAIP3-209ENST00000619035 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
TNFAIP3-209ENST00000619035 SPATA31D1Q6ZQQ2 1576 aa17.61■□□□□ 0.41
TNFAIP3-209ENST00000619035 PPLO60437 1756 aa17.6■□□□□ 0.41
TNFAIP3-209ENST00000619035 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
TNFAIP3-209ENST00000619035 NUTM2DQ5VT03 806 aaPredicted RBP17.58■□□□□ 0.4
TNFAIP3-209ENST00000619035 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
TNFAIP3-209ENST00000619035 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
TNFAIP3-209ENST00000619035 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
TNFAIP3-209ENST00000619035 SCAF11Q99590 1463 aaKnown RBP17.55■□□□□ 0.4
TNFAIP3-209ENST00000619035 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
TNFAIP3-209ENST00000619035 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
TNFAIP3-209ENST00000619035 TESK2Q96S53 571 aa17.54■□□□□ 0.4
TNFAIP3-209ENST00000619035 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
TNFAIP3-209ENST00000619035 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
TNFAIP3-209ENST00000619035 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
TNFAIP3-209ENST00000619035 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
TNFAIP3-209ENST00000619035 SENP3Q9H4L4 574 aaPredicted RBP17.52■□□□□ 0.4
TNFAIP3-209ENST00000619035 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
TNFAIP3-209ENST00000619035 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.39
TNFAIP3-209ENST00000619035 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.39
TNFAIP3-209ENST00000619035 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
TNFAIP3-209ENST00000619035 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
TNFAIP3-209ENST00000619035 EIF3AQ14152 1382 aaKnown RBP17.51■□□□□ 0.39
TNFAIP3-209ENST00000619035 TMF1P82094 1093 aa17.5■□□□□ 0.39
TNFAIP3-209ENST00000619035 KDM5AP29375 1690 aaKnown RBP17.5■□□□□ 0.39
TNFAIP3-209ENST00000619035 C14orf93Q9H972 538 aaKnown RBP17.49■□□□□ 0.39
TNFAIP3-209ENST00000619035 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
TNFAIP3-209ENST00000619035 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
TNFAIP3-209ENST00000619035 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
TNFAIP3-209ENST00000619035 TNRQ92752 1358 aa17.45■□□□□ 0.38
TNFAIP3-209ENST00000619035 A2ML1A8K2U0 1454 aa17.45■□□□□ 0.38
TNFAIP3-209ENST00000619035 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
TNFAIP3-209ENST00000619035 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
TNFAIP3-209ENST00000619035 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
TNFAIP3-209ENST00000619035 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
TNFAIP3-209ENST00000619035 MYO3AQ8NEV4 1616 aa17.42■□□□□ 0.38
TNFAIP3-209ENST00000619035 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
TNFAIP3-209ENST00000619035 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
TNFAIP3-209ENST00000619035 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
TNFAIP3-209ENST00000619035 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
TNFAIP3-209ENST00000619035 C3P01024 1663 aa17.41■□□□□ 0.38
TNFAIP3-209ENST00000619035 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
TNFAIP3-209ENST00000619035 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.4■□□□□ 0.38
TNFAIP3-209ENST00000619035 CENPJQ9HC77 1338 aaPredicted RBP17.39■□□□□ 0.37
TNFAIP3-209ENST00000619035 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
TNFAIP3-209ENST00000619035 PANK3Q9H999 370 aa17.37■□□□□ 0.37
TNFAIP3-209ENST00000619035 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
TNFAIP3-209ENST00000619035 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
TNFAIP3-209ENST00000619035 STK26Q9P289 416 aa17.36■□□□□ 0.37
TNFAIP3-209ENST00000619035 ASXL1Q8IXJ9 1541 aa17.34■□□□□ 0.37
TNFAIP3-209ENST00000619035 QRICH2Q9H0J4 1663 aa17.34■□□□□ 0.37
TNFAIP3-209ENST00000619035 ALKQ9UM73 1620 aa17.33■□□□□ 0.37
TNFAIP3-209ENST00000619035 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
TNFAIP3-209ENST00000619035 SAFB2Q14151 953 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFAIP3-209ENST00000619035 TMEM2Q9UHN6 1383 aa17.32■□□□□ 0.36
TNFAIP3-209ENST00000619035 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
TNFAIP3-209ENST00000619035 ARHGEF28Q8N1W1 1705 aaKnown RBP17.32■□□□□ 0.36
TNFAIP3-209ENST00000619035 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
TNFAIP3-209ENST00000619035 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
TNFAIP3-209ENST00000619035 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
TNFAIP3-209ENST00000619035 MYOM1P52179 1685 aa17.29■□□□□ 0.36
TNFAIP3-209ENST00000619035 YTHDC2Q9H6S0 1430 aaKnown RBP17.29■□□□□ 0.36
TNFAIP3-209ENST00000619035 BCANQ96GW7 911 aa17.29■□□□□ 0.36
TNFAIP3-209ENST00000619035 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
TNFAIP3-209ENST00000619035 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
TNFAIP3-209ENST00000619035 RALBP1Q15311 655 aa17.28■□□□□ 0.36
TNFAIP3-209ENST00000619035 SETD1AO15047 1707 aaKnown RBP17.28■□□□□ 0.36
TNFAIP3-209ENST00000619035 RIMS1Q86UR5 1692 aaKnown RBP17.28■□□□□ 0.36
TNFAIP3-209ENST00000619035 SLIT1O75093 1534 aa17.28■□□□□ 0.36
TNFAIP3-209ENST00000619035 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.35
TNFAIP3-209ENST00000619035 PRAM1Q96QH2 718 aa17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 POGKQ9P215 609 aa17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 PTPRMP28827 1452 aa17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 MYBBP1AQ9BQG0 1328 aaKnown RBP17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
TNFAIP3-209ENST00000619035 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
TNFAIP3-209ENST00000619035 TMC1Q8TDI8 760 aa17.24■□□□□ 0.35
TNFAIP3-209ENST00000619035 PARD3Q8TEW0 1356 aa17.24■□□□□ 0.35
TNFAIP3-209ENST00000619035 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
TNFAIP3-209ENST00000619035 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
TNFAIP3-209ENST00000619035 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
TNFAIP3-209ENST00000619035 PLEKHG1Q9ULL1 1385 aa17.24■□□□□ 0.35
TNFAIP3-209ENST00000619035 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
TNFAIP3-209ENST00000619035 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
TNFAIP3-209ENST00000619035 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
TNFAIP3-209ENST00000619035 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
TNFAIP3-209ENST00000619035 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
TNFAIP3-209ENST00000619035 METP08581 1390 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms