RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
CNOT3-210ENST00000618939 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
CNOT3-210ENST00000618939 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
CNOT3-210ENST00000618939 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
CNOT3-210ENST00000618939 MTHFSP49914 203 aa17.48■□□□□ 0.39
CNOT3-210ENST00000618939 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
CNOT3-210ENST00000618939 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
CNOT3-210ENST00000618939 DIAPH1O60610 1272 aaKnown RBP17.47■□□□□ 0.39
CNOT3-210ENST00000618939 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
CNOT3-210ENST00000618939 DZIP1LQ8IYY4 767 aaKnown RBP17.46■□□□□ 0.39
CNOT3-210ENST00000618939 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
CNOT3-210ENST00000618939 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
CNOT3-210ENST00000618939 GZF1Q9H116 711 aaPredicted RBP17.46■□□□□ 0.39
CNOT3-210ENST00000618939 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
CNOT3-210ENST00000618939 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
CNOT3-210ENST00000618939 RIPK4P57078 832 aa17.44■□□□□ 0.38
CNOT3-210ENST00000618939 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
CNOT3-210ENST00000618939 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
CNOT3-210ENST00000618939 RAPGEF6Q8TEU7 1601 aa17.44■□□□□ 0.38
CNOT3-210ENST00000618939 SLC12A5Q9H2X9 1139 aa17.43■□□□□ 0.38
CNOT3-210ENST00000618939 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
CNOT3-210ENST00000618939 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
CNOT3-210ENST00000618939 MCCP23508 829 aa17.43■□□□□ 0.38
CNOT3-210ENST00000618939 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
CNOT3-210ENST00000618939 PTMAP06454 111 aaKnown RBP17.42■□□□□ 0.38
CNOT3-210ENST00000618939 COG3Q96JB2 828 aa17.42■□□□□ 0.38
CNOT3-210ENST00000618939 BACH2Q9BYV9 841 aa17.42■□□□□ 0.38
CNOT3-210ENST00000618939 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
CNOT3-210ENST00000618939 AAMPQ13685 434 aa17.41■□□□□ 0.38
CNOT3-210ENST00000618939 GSE1Q14687 1217 aa17.41■□□□□ 0.38
CNOT3-210ENST00000618939 NAP1L5Q96NT1 182 aaPredicted RBP17.41■□□□□ 0.38
CNOT3-210ENST00000618939 WDR62O43379 1518 aa17.4■□□□□ 0.38
CNOT3-210ENST00000618939 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
CNOT3-210ENST00000618939 BCAR3O75815 825 aa17.4■□□□□ 0.38
CNOT3-210ENST00000618939 HMMRO75330 724 aa17.39■□□□□ 0.37
CNOT3-210ENST00000618939 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
CNOT3-210ENST00000618939 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
CNOT3-210ENST00000618939 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
CNOT3-210ENST00000618939 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
CNOT3-210ENST00000618939 MSH5O43196 834 aa17.38■□□□□ 0.37
CNOT3-210ENST00000618939 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
CNOT3-210ENST00000618939 KCNJ4P48050 445 aa17.38■□□□□ 0.37
CNOT3-210ENST00000618939 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
CNOT3-210ENST00000618939 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
CNOT3-210ENST00000618939 ATP10BO94823 1461 aa17.36■□□□□ 0.37
CNOT3-210ENST00000618939 PTMSP20962 102 aa17.36■□□□□ 0.37
CNOT3-210ENST00000618939 RALGAPBQ86X10 1494 aa17.36■□□□□ 0.37
CNOT3-210ENST00000618939 AMPHP49418 695 aa17.36■□□□□ 0.37
CNOT3-210ENST00000618939 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
CNOT3-210ENST00000618939 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
CNOT3-210ENST00000618939 SLFN5Q08AF3 891 aa17.34■□□□□ 0.37
CNOT3-210ENST00000618939 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
CNOT3-210ENST00000618939 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
CNOT3-210ENST00000618939 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
CNOT3-210ENST00000618939 HMOX1P09601 288 aa17.32■□□□□ 0.36
CNOT3-210ENST00000618939 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
CNOT3-210ENST00000618939 A0A0G2JS52 829 aa17.32■□□□□ 0.36
CNOT3-210ENST00000618939 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
CNOT3-210ENST00000618939 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
CNOT3-210ENST00000618939 GNAI1P63096 354 aa17.3■□□□□ 0.36
CNOT3-210ENST00000618939 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
CNOT3-210ENST00000618939 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
CNOT3-210ENST00000618939 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
CNOT3-210ENST00000618939 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
CNOT3-210ENST00000618939 LNPKQ9C0E8 428 aa17.3■□□□□ 0.36
CNOT3-210ENST00000618939 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
CNOT3-210ENST00000618939 PLCB2Q00722 1185 aa17.29■□□□□ 0.36
CNOT3-210ENST00000618939 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
CNOT3-210ENST00000618939 DNTTIP2Q5QJE6 756 aaKnown RBP17.29■□□□□ 0.36
CNOT3-210ENST00000618939 WDR63Q8IWG1 891 aa17.29■□□□□ 0.36
CNOT3-210ENST00000618939 TRIM6-TRIM34B2RNG4 842 aa17.29■□□□□ 0.36
CNOT3-210ENST00000618939 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-210ENST00000618939 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
CNOT3-210ENST00000618939 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
CNOT3-210ENST00000618939 DDX11L8A8MPP1 907 aa17.28■□□□□ 0.36
CNOT3-210ENST00000618939 FGD1P98174 961 aa17.28■□□□□ 0.36
CNOT3-210ENST00000618939 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
CNOT3-210ENST00000618939 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
CNOT3-210ENST00000618939 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
CNOT3-210ENST00000618939 PZPP20742 1482 aa17.28■□□□□ 0.36
CNOT3-210ENST00000618939 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
CNOT3-210ENST00000618939 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.36
CNOT3-210ENST00000618939 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
CNOT3-210ENST00000618939 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.36
CNOT3-210ENST00000618939 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.27■□□□□ 0.353e-6■■□□□ 14.2
CNOT3-210ENST00000618939 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.35
CNOT3-210ENST00000618939 DNMT1P26358 1616 aaKnown RBP17.26■□□□□ 0.35
CNOT3-210ENST00000618939 RAPGEF3O95398 923 aa17.26■□□□□ 0.35
CNOT3-210ENST00000618939 ST18O60284 1047 aa17.26■□□□□ 0.35
CNOT3-210ENST00000618939 ADGRF5Q8IZF2 1346 aa17.26■□□□□ 0.35
CNOT3-210ENST00000618939 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
CNOT3-210ENST00000618939 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
CNOT3-210ENST00000618939 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CNOT3-210ENST00000618939 MSNP26038 577 aaKnown RBP17.25■□□□□ 0.35
CNOT3-210ENST00000618939 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
CNOT3-210ENST00000618939 CHMP5Q9NZZ3 219 aa17.25■□□□□ 0.35
CNOT3-210ENST00000618939 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
CNOT3-210ENST00000618939 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
CNOT3-210ENST00000618939 MAGI3Q5TCQ9 1506 aa17.24■□□□□ 0.35
CNOT3-210ENST00000618939 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms