RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CROCC2H7BZ55 1655 aa5.62□□□□□ -1.51
UBE2D3-233ENST00000618836 FAM43BQ6ZT52 329 aaPredicted RBP5.62□□□□□ -1.51
UBE2D3-233ENST00000618836 HS6ST3Q8IZP7 471 aa5.62□□□□□ -1.51
UBE2D3-233ENST00000618836 RBM25P49756 843 aaKnown RBP5.61□□□□□ -1.51
UBE2D3-233ENST00000618836 ABCA8O94911 1581 aa5.61□□□□□ -1.51
UBE2D3-233ENST00000618836 PYGBP11216 843 aa5.61□□□□□ -1.51
UBE2D3-233ENST00000618836 BIVM-ERCC5R4GMW8 1640 aa5.61□□□□□ -1.51
UBE2D3-233ENST00000618836 ANAPC15P60006 121 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 SPDYE2BA6NHP3 402 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 NEFMP07197 916 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 SPDYE6P0CI01 402 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 PTMSP20962 102 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 SPDYE2Q495Y8 402 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 ARID4BQ4LE39 1312 aaPredicted RBP5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 STK25O00506 426 aa5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 VGFO15240 615 aaPredicted RBP5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 FOXD4L5Q5VV16 416 aaPredicted RBP5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 FOXD4L4Q8WXT5 416 aaPredicted RBP5.6□□□□□ -1.51
UBE2D3-233ENST00000618836 TRAIPQ9BWF2 469 aa5.59□□□□□ -1.51
UBE2D3-233ENST00000618836 MED14O60244 1454 aa5.59□□□□□ -1.51
UBE2D3-233ENST00000618836 KCNV2Q8TDN2 545 aa5.59□□□□□ -1.51
UBE2D3-233ENST00000618836 UHRF1BP1Q6BDS2 1440 aa5.59□□□□□ -1.51
UBE2D3-233ENST00000618836 SUPT6HQ7KZ85 1726 aaKnown RBP5.59□□□□□ -1.52
UBE2D3-233ENST00000618836 POGZQ7Z3K3 1410 aa5.58□□□□□ -1.52
UBE2D3-233ENST00000618836 CEP170BQ9Y4F5 1589 aaPredicted RBP5.58□□□□□ -1.52
UBE2D3-233ENST00000618836 ZC3H13Q5T200 1668 aaKnown RBP5.58□□□□□ -1.52
UBE2D3-233ENST00000618836 CAMSAP1Q5T5Y3 1602 aa5.58□□□□□ -1.52
UBE2D3-233ENST00000618836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.58□□□□□ -1.52
UBE2D3-233ENST00000618836 GTF2E1P29083 439 aaPredicted RBP5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 WWC1Q8IX03 1113 aa5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 PTMAP06454 111 aaKnown RBP5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 CHMP7Q8WUX9 453 aaPredicted RBP5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 PPM1GO15355 546 aaPredicted RBP5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 CACNB1Q02641 598 aaPredicted RBP5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 USP35Q9P2H5 1018 aa5.57□□□□□ -1.52
UBE2D3-233ENST00000618836 EXOC8Q8IYI6 725 aa5.56□□□□□ -1.52
UBE2D3-233ENST00000618836 CREBZFQ9NS37 354 aa5.56□□□□□ -1.52
UBE2D3-233ENST00000618836 MMP14P50281 582 aa5.56□□□□□ -1.52
UBE2D3-233ENST00000618836 GPATCH11Q8N954 259 aa5.56□□□□□ -1.52
UBE2D3-233ENST00000618836 CHMP4BQ9H444 224 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 COL16A1Q07092 1604 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 FAM135AQ9P2D6 1515 aa5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 E9PSI1 815 aa5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 MFAP1P55081 439 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 ZBTB12Q9Y330 459 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 HSPA1LP34931 641 aa5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 HSP90AB4PQ58FF6 505 aa5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 CHADLQ6NUI6 762 aa5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 LAMC1P11047 1609 aa5.55□□□□□ -1.52
UBE2D3-233ENST00000618836 CHD4Q14839 1912 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 ZFYVE16Q7Z3T8 1539 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 DIP2AQ14689 1571 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 CCDC88BA6NC98 1476 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 KDM4AO75164 1064 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 PPP1R37O75864 691 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 ARHGAP23Q9P227 1491 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 NEUROD1Q13562 356 aa5.54□□□□□ -1.52
UBE2D3-233ENST00000618836 PHF14O94880 888 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 CLEC11AQ9Y240 323 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 TMTC2Q8N394 836 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 ZNF526Q8TF50 670 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 SHANK2Q9UPX8 1470 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 PLEKHD1A6NEE1 506 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 RIPOR2Q9Y4F9 1068 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 FAM135BQ49AJ0 1406 aa5.53□□□□□ -1.52
UBE2D3-233ENST00000618836 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 TMCO4Q5TGY1 634 aa5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 LRRC9Q6ZRR7 1453 aa5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 COL24A1Q17RW2 1714 aa5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 FGD6Q6ZV73 1430 aa5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 SGSM3Q96HU1 749 aa5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 AHDC1Q5TGY3 1603 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 TDRD9Q8NDG6 1382 aaKnown RBP5.52□□□□□ -1.53
UBE2D3-233ENST00000618836 RIOK3O14730 519 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 STAC3Q96MF2 364 aa5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 STK24Q9Y6E0 443 aa5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 POTEAQ6S8J7 498 aa5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 UACAQ9BZF9 1416 aa5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 IGSF5Q9NSI5 407 aa5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 STAG3Q9UJ98 1225 aa5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 LAS1LQ9Y4W2 734 aaKnown RBP5.51□□□□□ -1.53
UBE2D3-233ENST00000618836 CANXP27824 592 aaKnown RBP5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 UGGT2Q9NYU1 1516 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 FAM193AP78312 1265 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 PCDHB8Q9UN66 801 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 PCDHB13Q9Y5F0 798 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 APBB1O00213 710 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 CLGNO14967 610 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 DCAF8Q5TAQ9 597 aa5.5□□□□□ -1.53
UBE2D3-233ENST00000618836 ZNF622Q969S3 477 aaKnown RBP eCLIP5.49□□□□□ -1.53
UBE2D3-233ENST00000618836 AKNAQ7Z591 1439 aa5.49□□□□□ -1.53
UBE2D3-233ENST00000618836 ATP10BO94823 1461 aa5.49□□□□□ -1.53
UBE2D3-233ENST00000618836 RREB1Q92766 1687 aa5.49□□□□□ -1.53
UBE2D3-233ENST00000618836 CD109Q6YHK3 1445 aa5.49□□□□□ -1.53
UBE2D3-233ENST00000618836 TRAPPC8Q9Y2L5 1435 aa5.48□□□□□ -1.53
UBE2D3-233ENST00000618836 KDM5DQ9BY66 1539 aa5.48□□□□□ -1.53
UBE2D3-233ENST00000618836 SEMA3EO15041 775 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms