RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
TNFRSF11A-205ENST00000616710 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF11A-205ENST00000616710 MAP7D2Q96T17 732 aa17.42■□□□□ 0.38
TNFRSF11A-205ENST00000616710 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
TNFRSF11A-205ENST00000616710 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
TNFRSF11A-205ENST00000616710 CADPSQ9ULU8 1353 aa17.41■□□□□ 0.38
TNFRSF11A-205ENST00000616710 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
TNFRSF11A-205ENST00000616710 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
TNFRSF11A-205ENST00000616710 JARID2Q92833 1246 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF11A-205ENST00000616710 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
TNFRSF11A-205ENST00000616710 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
TNFRSF11A-205ENST00000616710 ZNF830Q96NB3 372 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF11A-205ENST00000616710 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
TNFRSF11A-205ENST00000616710 OFD1O75665 1012 aa17.38■□□□□ 0.37
TNFRSF11A-205ENST00000616710 CGNQ9P2M7 1197 aaKnown RBP17.38■□□□□ 0.37
TNFRSF11A-205ENST00000616710 U2AF1L5P0DN76 240 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF11A-205ENST00000616710 U2AF1Q01081 240 aaKnown RBP eCLIP17.37■□□□□ 0.37
TNFRSF11A-205ENST00000616710 RLBP1P12271 317 aa17.37■□□□□ 0.37
TNFRSF11A-205ENST00000616710 MIA2Q96PC5 1412 aa17.37■□□□□ 0.37
TNFRSF11A-205ENST00000616710 SYCE3A1L190 88 aa17.36■□□□□ 0.37
TNFRSF11A-205ENST00000616710 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
TNFRSF11A-205ENST00000616710 RIPK4P57078 832 aa17.36■□□□□ 0.37
TNFRSF11A-205ENST00000616710 RPRD2Q5VT52 1461 aaKnown RBP17.36■□□□□ 0.37
TNFRSF11A-205ENST00000616710 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
TNFRSF11A-205ENST00000616710 FGD1P98174 961 aa17.35■□□□□ 0.37
TNFRSF11A-205ENST00000616710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNFRSF11A-205ENST00000616710 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF11A-205ENST00000616710 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
TNFRSF11A-205ENST00000616710 C1orf115Q9H7X2 142 aa17.34■□□□□ 0.37
TNFRSF11A-205ENST00000616710 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
TNFRSF11A-205ENST00000616710 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
TNFRSF11A-205ENST00000616710 TRERF1Q96PN7 1200 aa17.34■□□□□ 0.37
TNFRSF11A-205ENST00000616710 CHAMP1Q96JM3 812 aa17.33■□□□□ 0.37
TNFRSF11A-205ENST00000616710 DZIP1LQ8IYY4 767 aaKnown RBP17.33■□□□□ 0.36
TNFRSF11A-205ENST00000616710 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
TNFRSF11A-205ENST00000616710 PPP4R3BQ5MIZ7 849 aa17.32■□□□□ 0.36
TNFRSF11A-205ENST00000616710 FYCO1Q9BQS8 1478 aa17.32■□□□□ 0.36
TNFRSF11A-205ENST00000616710 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
TNFRSF11A-205ENST00000616710 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
TNFRSF11A-205ENST00000616710 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFRSF11A-205ENST00000616710 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
TNFRSF11A-205ENST00000616710 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF11A-205ENST00000616710 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
TNFRSF11A-205ENST00000616710 ISY1Q9ULR0 285 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-205ENST00000616710 NESP48681 1621 aa17.29■□□□□ 0.36
TNFRSF11A-205ENST00000616710 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF11A-205ENST00000616710 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
TNFRSF11A-205ENST00000616710 PTMSP20962 102 aa17.28■□□□□ 0.36
TNFRSF11A-205ENST00000616710 DRC7Q8IY82 874 aa17.28■□□□□ 0.36
TNFRSF11A-205ENST00000616710 K7ELQ4 463 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF11A-205ENST00000616710 MTERF4Q7Z6M4 381 aaKnown RBP17.27■□□□□ 0.36
TNFRSF11A-205ENST00000616710 RBSNQ9H1K0 784 aa17.27■□□□□ 0.36
TNFRSF11A-205ENST00000616710 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
TNFRSF11A-205ENST00000616710 BAG4O95429 457 aaKnown RBP17.27■□□□□ 0.35
TNFRSF11A-205ENST00000616710 WWC1Q8IX03 1113 aa17.27■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ZNF592Q92610 1267 aa17.27■□□□□ 0.35
TNFRSF11A-205ENST00000616710 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
TNFRSF11A-205ENST00000616710 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
TNFRSF11A-205ENST00000616710 SASS6Q6UVJ0 657 aa17.26■□□□□ 0.35
TNFRSF11A-205ENST00000616710 CCDC39Q9UFE4 941 aa17.26■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ERICH4A6NGS2 130 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 SPC24Q8NBT2 197 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 KDM5BQ9UGL1 1544 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 NPHP1O15259 732 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
TNFRSF11A-205ENST00000616710 PARD3Q8TEW0 1356 aa17.24■□□□□ 0.35
TNFRSF11A-205ENST00000616710 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
TNFRSF11A-205ENST00000616710 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
TNFRSF11A-205ENST00000616710 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
TNFRSF11A-205ENST00000616710 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
TNFRSF11A-205ENST00000616710 DYNC1I1O14576 645 aa17.23■□□□□ 0.35
TNFRSF11A-205ENST00000616710 SMAP1Q8IYB5 467 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF11A-205ENST00000616710 AEBP1Q8IUX7 1158 aa17.23■□□□□ 0.35
TNFRSF11A-205ENST00000616710 TTC12Q9H892 705 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ZBTB22O15209 634 aa17.22■□□□□ 0.35
TNFRSF11A-205ENST00000616710 NAP1L2Q9ULW6 460 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ZKSCAN5Q9Y2L8 839 aa17.22■□□□□ 0.35
TNFRSF11A-205ENST00000616710 CD2BP2O95400 341 aaKnown RBP17.21■□□□□ 0.35
TNFRSF11A-205ENST00000616710 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
TNFRSF11A-205ENST00000616710 PDCL2Q8N4E4 241 aa17.21■□□□□ 0.35
TNFRSF11A-205ENST00000616710 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
TNFRSF11A-205ENST00000616710 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
TNFRSF11A-205ENST00000616710 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 KIF3AQ9Y496 699 aa17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 CCDC94Q9BW85 323 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 USP25Q9UHP3 1055 aa17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
TNFRSF11A-205ENST00000616710 TNNT3P45378 269 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF11A-205ENST00000616710 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
TNFRSF11A-205ENST00000616710 PKP1Q13835 747 aa17.19■□□□□ 0.34
TNFRSF11A-205ENST00000616710 KDM6BO15054 1643 aa17.19■□□□□ 0.34
TNFRSF11A-205ENST00000616710 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
TNFRSF11A-205ENST00000616710 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms