RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
TARDBP-217ENST00000616545 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
TARDBP-217ENST00000616545 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
TARDBP-217ENST00000616545 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
TARDBP-217ENST00000616545 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
TARDBP-217ENST00000616545 KDM2AQ9Y2K7 1162 aa16.63■□□□□ 0.25
TARDBP-217ENST00000616545 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
TARDBP-217ENST00000616545 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
TARDBP-217ENST00000616545 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
TARDBP-217ENST00000616545 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
TARDBP-217ENST00000616545 SLIT1O75093 1534 aa16.61■□□□□ 0.25
TARDBP-217ENST00000616545 EID1Q9Y6B2 187 aa16.61■□□□□ 0.25
TARDBP-217ENST00000616545 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
TARDBP-217ENST00000616545 PPLO60437 1756 aa16.61■□□□□ 0.25
TARDBP-217ENST00000616545 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
TARDBP-217ENST00000616545 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
TARDBP-217ENST00000616545 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
TARDBP-217ENST00000616545 NBPF8Q3BBV2 869 aa16.57■□□□□ 0.24
TARDBP-217ENST00000616545 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
TARDBP-217ENST00000616545 TXNDC2Q86VQ3 553 aa16.56■□□□□ 0.24
TARDBP-217ENST00000616545 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
TARDBP-217ENST00000616545 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
TARDBP-217ENST00000616545 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
TARDBP-217ENST00000616545 KIAA1210Q9ULL0 1709 aa16.55■□□□□ 0.24
TARDBP-217ENST00000616545 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
TARDBP-217ENST00000616545 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
TARDBP-217ENST00000616545 GPRASP1Q5JY77 1395 aa16.53■□□□□ 0.24
TARDBP-217ENST00000616545 LAMC1P11047 1609 aa16.53■□□□□ 0.24
TARDBP-217ENST00000616545 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
TARDBP-217ENST00000616545 LTKP29376 864 aa16.51■□□□□ 0.23
TARDBP-217ENST00000616545 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
TARDBP-217ENST00000616545 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
TARDBP-217ENST00000616545 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-217ENST00000616545 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
TARDBP-217ENST00000616545 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
TARDBP-217ENST00000616545 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
TARDBP-217ENST00000616545 MED14O60244 1454 aa16.48■□□□□ 0.23
TARDBP-217ENST00000616545 TBX22Q9Y458 520 aa16.47■□□□□ 0.23
TARDBP-217ENST00000616545 DIP2AQ14689 1571 aa16.47■□□□□ 0.23
TARDBP-217ENST00000616545 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
TARDBP-217ENST00000616545 EIF4G2P78344 907 aaKnown RBP eCLIP16.46■□□□□ 0.23
TARDBP-217ENST00000616545 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
TARDBP-217ENST00000616545 BCANQ96GW7 911 aa16.45■□□□□ 0.22
TARDBP-217ENST00000616545 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
TARDBP-217ENST00000616545 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
TARDBP-217ENST00000616545 NPHP4O75161 1426 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-217ENST00000616545 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
TARDBP-217ENST00000616545 ADGRB1O14514 1584 aa16.43■□□□□ 0.22
TARDBP-217ENST00000616545 EIF3AQ14152 1382 aaKnown RBP16.43■□□□□ 0.22
TARDBP-217ENST00000616545 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
TARDBP-217ENST00000616545 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-217ENST00000616545 USP47Q96K76 1375 aa16.41■□□□□ 0.22
TARDBP-217ENST00000616545 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
TARDBP-217ENST00000616545 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
TARDBP-217ENST00000616545 ABCC11Q96J66 1382 aa16.39■□□□□ 0.21
TARDBP-217ENST00000616545 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
TARDBP-217ENST00000616545 IQGAP1P46940 1657 aa16.39■□□□□ 0.21
TARDBP-217ENST00000616545 NCKAP5LQ9HCH0 1330 aa16.39■□□□□ 0.21
TARDBP-217ENST00000616545 YTHDC2Q9H6S0 1430 aaKnown RBP16.38■□□□□ 0.21
TARDBP-217ENST00000616545 HSPA2P54652 639 aa16.38■□□□□ 0.21
TARDBP-217ENST00000616545 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
TARDBP-217ENST00000616545 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
TARDBP-217ENST00000616545 TMEM132EQ6IEE7 984 aa16.37■□□□□ 0.21
TARDBP-217ENST00000616545 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
TARDBP-217ENST00000616545 METP08581 1390 aa16.37■□□□□ 0.21
TARDBP-217ENST00000616545 TECPR2O15040 1411 aa16.36■□□□□ 0.21
TARDBP-217ENST00000616545 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
TARDBP-217ENST00000616545 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
TARDBP-217ENST00000616545 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-217ENST00000616545 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
TARDBP-217ENST00000616545 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
TARDBP-217ENST00000616545 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.2
TARDBP-217ENST00000616545 TRAK1Q9UPV9 953 aa16.33■□□□□ 0.2
TARDBP-217ENST00000616545 KCNA6P17658 529 aa16.32■□□□□ 0.2
TARDBP-217ENST00000616545 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
TARDBP-217ENST00000616545 KNDC1Q76NI1 1749 aa16.31■□□□□ 0.2
TARDBP-217ENST00000616545 PTCH1Q13635 1447 aa16.31■□□□□ 0.2
TARDBP-217ENST00000616545 STK26Q9P289 416 aa16.31■□□□□ 0.2
TARDBP-217ENST00000616545 AMOTL2Q9Y2J4 779 aa16.31■□□□□ 0.2
TARDBP-217ENST00000616545 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
TARDBP-217ENST00000616545 CPS1P31327 1500 aa16.3■□□□□ 0.2
TARDBP-217ENST00000616545 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
TARDBP-217ENST00000616545 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
TARDBP-217ENST00000616545 POGKQ9P215 609 aa16.29■□□□□ 0.2
TARDBP-217ENST00000616545 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
TARDBP-217ENST00000616545 TMF1P82094 1093 aa16.28■□□□□ 0.2
TARDBP-217ENST00000616545 TESK2Q96S53 571 aa16.28■□□□□ 0.2
TARDBP-217ENST00000616545 ARHGEF28Q8N1W1 1705 aaKnown RBP16.28■□□□□ 0.2
TARDBP-217ENST00000616545 CHD2O14647 1828 aaKnown RBP16.27■□□□□ 0.2
TARDBP-217ENST00000616545 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.2
TARDBP-217ENST00000616545 PRAM1Q96QH2 718 aa16.27■□□□□ 0.2
TARDBP-217ENST00000616545 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
TARDBP-217ENST00000616545 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
TARDBP-217ENST00000616545 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
TARDBP-217ENST00000616545 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
TARDBP-217ENST00000616545 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
TARDBP-217ENST00000616545 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
TARDBP-217ENST00000616545 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
TARDBP-217ENST00000616545 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.19
TARDBP-217ENST00000616545 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms