RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 AKNAQ7Z591 1439 aa23.02■■□□□ 1.28
SPAST-203ENST00000615843 IFT57Q9NWB7 429 aa23.02■■□□□ 1.28
SPAST-203ENST00000615843 KIF3BO15066 747 aa23.01■■□□□ 1.27
SPAST-203ENST00000615843 RASSF8Q8NHQ8 419 aa23.01■■□□□ 1.27
SPAST-203ENST00000615843 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
SPAST-203ENST00000615843 ISY1Q9ULR0 285 aaKnown RBP23.01■■□□□ 1.27
SPAST-203ENST00000615843 CCDC173Q0VFZ6 552 aa23.01■■□□□ 1.27
SPAST-203ENST00000615843 HOMER1Q86YM7 354 aa23■■□□□ 1.27
SPAST-203ENST00000615843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23■■□□□ 1.27
SPAST-203ENST00000615843 RNF214Q8ND24 703 aa23■■□□□ 1.27
SPAST-203ENST00000615843 CHMP4CQ96CF2 233 aa22.99■■□□□ 1.27
SPAST-203ENST00000615843 ANO2Q9NQ90 1003 aa22.99■■□□□ 1.27
SPAST-203ENST00000615843 BICD2Q8TD16 824 aa22.98■■□□□ 1.27
SPAST-203ENST00000615843 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
SPAST-203ENST00000615843 RBM10P98175 930 aaKnown RBP22.98■■□□□ 1.27
SPAST-203ENST00000615843 API5Q9BZZ5 524 aaKnown RBP22.98■■□□□ 1.27
SPAST-203ENST00000615843 CAVIN1Q6NZI2 390 aaKnown RBP22.98■■□□□ 1.27
SPAST-203ENST00000615843 RUNDC1Q96C34 613 aa22.98■■□□□ 1.27
SPAST-203ENST00000615843 ZKSCAN1P17029 563 aaPredicted RBP22.97■■□□□ 1.27
SPAST-203ENST00000615843 RUFY2Q8WXA3 655 aa22.96■■□□□ 1.27
SPAST-203ENST00000615843 TPD52L1Q16890 204 aaPredicted RBP22.96■■□□□ 1.27
SPAST-203ENST00000615843 TPM1P09493 284 aa22.95■■□□□ 1.27
SPAST-203ENST00000615843 MLECQ14165 292 aa22.95■■□□□ 1.27
SPAST-203ENST00000615843 TSR1Q2NL82 804 aaKnown RBP22.95■■□□□ 1.27
SPAST-203ENST00000615843 ARGLU1Q9NWB6 273 aaPredicted RBP22.95■■□□□ 1.26
SPAST-203ENST00000615843 SMC3Q9UQE7 1217 aa22.95■■□□□ 1.26
SPAST-203ENST00000615843 VPS37CA5D8V6 355 aaPredicted RBP22.95■■□□□ 1.26
SPAST-203ENST00000615843 CDC45O75419 566 aa22.95■■□□□ 1.26
SPAST-203ENST00000615843 SASS6Q6UVJ0 657 aa22.95■■□□□ 1.26
SPAST-203ENST00000615843 PES1O00541 588 aaKnown RBP22.94■■□□□ 1.26
SPAST-203ENST00000615843 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
SPAST-203ENST00000615843 ZNF330Q9Y3S2 320 aaPredicted RBP22.93■■□□□ 1.26
SPAST-203ENST00000615843 RRP9O43818 475 aaKnown RBP22.93■■□□□ 1.26
SPAST-203ENST00000615843 ADAMTS8Q9UP79 889 aa22.93■■□□□ 1.26
SPAST-203ENST00000615843 CCDC70Q6NSX1 233 aa22.93■■□□□ 1.26
SPAST-203ENST00000615843 TAF7LQ5H9L4 462 aa22.92■■□□□ 1.26
SPAST-203ENST00000615843 RIPK4P57078 832 aa22.92■■□□□ 1.26
SPAST-203ENST00000615843 HMGN5P82970 282 aaKnown RBP22.92■■□□□ 1.26
SPAST-203ENST00000615843 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
SPAST-203ENST00000615843 MBD3O95983 291 aa22.92■■□□□ 1.26
SPAST-203ENST00000615843 GRPEL1Q9HAV7 217 aa22.91■■□□□ 1.26
SPAST-203ENST00000615843 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
SPAST-203ENST00000615843 MNS1Q8NEH6 495 aa22.91■■□□□ 1.26
SPAST-203ENST00000615843 ROCK1Q13464 1354 aa22.91■■□□□ 1.26
SPAST-203ENST00000615843 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
SPAST-203ENST00000615843 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
SPAST-203ENST00000615843 KIF21BO75037 1637 aa22.9■■□□□ 1.26
SPAST-203ENST00000615843 TOMM22Q9NS69 142 aa22.89■■□□□ 1.26
SPAST-203ENST00000615843 AMPHP49418 695 aa22.88■■□□□ 1.25
SPAST-203ENST00000615843 CCDC66A2RUB6 948 aa22.88■■□□□ 1.25
SPAST-203ENST00000615843 EVC2Q86UK5 1308 aa22.88■■□□□ 1.25
SPAST-203ENST00000615843 ESPNB1AK53 854 aa22.87■■□□□ 1.25
SPAST-203ENST00000615843 PRPF40AO75400 957 aaKnown RBP22.87■■□□□ 1.25
SPAST-203ENST00000615843 DIAPH1O60610 1272 aaKnown RBP22.87■■□□□ 1.25
SPAST-203ENST00000615843 NOM1Q5C9Z4 860 aaKnown RBP22.87■■□□□ 1.25
SPAST-203ENST00000615843 TSPY26PQ9H489 355 aa22.87■■□□□ 1.25
SPAST-203ENST00000615843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.86■■□□□ 1.25
SPAST-203ENST00000615843 MIA2Q96PC5 1412 aa22.86■■□□□ 1.25
SPAST-203ENST00000615843 BCL11BQ9C0K0 894 aaPredicted RBP22.85■■□□□ 1.25
SPAST-203ENST00000615843 PDE3AQ14432 1141 aa22.84■■□□□ 1.25
SPAST-203ENST00000615843 LETM1O95202 739 aaPredicted RBP22.83■■□□□ 1.25
SPAST-203ENST00000615843 RNF20Q5VTR2 975 aa22.83■■□□□ 1.25
SPAST-203ENST00000615843 CCDC73Q6ZRK6 1079 aa22.83■■□□□ 1.25
SPAST-203ENST00000615843 PDE4CQ08493 712 aa22.83■■□□□ 1.24
SPAST-203ENST00000615843 CSB-PGBD3P0DP91 1061 aa22.83■■□□□ 1.24
SPAST-203ENST00000615843 IPO7O95373 1038 aaKnown RBP22.82■■□□□ 1.24
SPAST-203ENST00000615843 MCM4P33991 863 aa22.82■■□□□ 1.24
SPAST-203ENST00000615843 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
SPAST-203ENST00000615843 CPLX2Q6PUV4 134 aaKnown RBP22.81■■□□□ 1.24
SPAST-203ENST00000615843 RABEP1Q15276 862 aa22.81■■□□□ 1.24
SPAST-203ENST00000615843 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
SPAST-203ENST00000615843 FBXW7Q969H0 707 aa22.81■■□□□ 1.24
SPAST-203ENST00000615843 CCDC9Q9Y3X0 531 aaKnown RBP22.81■■□□□ 1.24
SPAST-203ENST00000615843 LRRC9Q6ZRR7 1453 aa22.81■■□□□ 1.24
SPAST-203ENST00000615843 LTV1Q96GA3 475 aaPredicted RBP22.81■■□□□ 1.24
SPAST-203ENST00000615843 RRBP1Q9P2E9 1410 aaKnown RBP22.8■■□□□ 1.24
SPAST-203ENST00000615843 IFIT2P09913 472 aaKnown RBP22.8■■□□□ 1.24
SPAST-203ENST00000615843 COG3Q96JB2 828 aa22.8■■□□□ 1.24
SPAST-203ENST00000615843 ACBD3Q9H3P7 528 aa22.8■■□□□ 1.24
SPAST-203ENST00000615843 HSP90B2PQ58FF3 399 aa22.8■■□□□ 1.24
SPAST-203ENST00000615843 TRIM5Q9C035 493 aa22.79■■□□□ 1.24
SPAST-203ENST00000615843 UQCRHLA0A096LP55 91 aa22.79■■□□□ 1.24
SPAST-203ENST00000615843 UQCRHP07919 91 aa22.79■■□□□ 1.24
SPAST-203ENST00000615843 CCDC184Q52MB2 194 aa22.79■■□□□ 1.24
SPAST-203ENST00000615843 GNAI1P63096 354 aa22.78■■□□□ 1.24
SPAST-203ENST00000615843 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
SPAST-203ENST00000615843 WASHC2CQ9Y4E1 1318 aa22.78■■□□□ 1.24
SPAST-203ENST00000615843 CEP89Q96ST8 783 aa22.78■■□□□ 1.24
SPAST-203ENST00000615843 CWC15Q9P013 229 aaKnown RBP22.78■■□□□ 1.24
SPAST-203ENST00000615843 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.78■■□□□ 1.24
SPAST-203ENST00000615843 CPLX1O14810 134 aa22.77■■□□□ 1.24
SPAST-203ENST00000615843 ANKRD20A12PQ8NF67 263 aa22.77■■□□□ 1.24
SPAST-203ENST00000615843 TRIM29Q14134 588 aa22.76■■□□□ 1.23
SPAST-203ENST00000615843 HOOK1Q9UJC3 728 aaKnown RBP22.76■■□□□ 1.23
SPAST-203ENST00000615843 AKAP17AQ02040 695 aaKnown RBP22.76■■□□□ 1.23
SPAST-203ENST00000615843 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.76■■□□□ 1.23
SPAST-203ENST00000615843 NEK4P51957 841 aa22.76■■□□□ 1.23
SPAST-203ENST00000615843 BCAR3O75815 825 aa22.75■■□□□ 1.23
SPAST-203ENST00000615843 PPP2R1AP30153 589 aa22.75■■□□□ 1.23
SPAST-203ENST00000615843 C9orf78Q9NZ63 289 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms