RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
CNOT3-208ENST00000613073 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
CNOT3-208ENST00000613073 PANK3Q9H999 370 aa22.16■■□□□ 1.14
CNOT3-208ENST00000613073 STAC3Q96MF2 364 aa22.16■■□□□ 1.14
CNOT3-208ENST00000613073 FAM69CQ0P6D2 419 aa22.15■■□□□ 1.14
CNOT3-208ENST00000613073 NPATQ14207 1427 aa22.15■■□□□ 1.14
CNOT3-208ENST00000613073 ZBED9Q6R2W3 1325 aa22.14■■□□□ 1.14
CNOT3-208ENST00000613073 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.14
CNOT3-208ENST00000613073 RIMBP3CA6NJZ7 1639 aa22.14■■□□□ 1.13
CNOT3-208ENST00000613073 RIMBP3BA6NNM3 1639 aa22.14■■□□□ 1.13
CNOT3-208ENST00000613073 RIMBP3Q9UFD9 1639 aa22.14■■□□□ 1.13
CNOT3-208ENST00000613073 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.13
CNOT3-208ENST00000613073 RALBP1Q15311 655 aa22.13■■□□□ 1.13
CNOT3-208ENST00000613073 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
CNOT3-208ENST00000613073 MYBBP1AQ9BQG0 1328 aaKnown RBP22.13■■□□□ 1.13
CNOT3-208ENST00000613073 PNISRQ8TF01 805 aaKnown RBP22.13■■□□□ 1.13
CNOT3-208ENST00000613073 KIF1BO60333 1816 aa22.13■■□□□ 1.13
CNOT3-208ENST00000613073 IL27Q8NEV9 243 aa22.11■■□□□ 1.13
CNOT3-208ENST00000613073 SCAF11Q99590 1463 aaKnown RBP22.11■■□□□ 1.13
CNOT3-208ENST00000613073 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
CNOT3-208ENST00000613073 MAP3K4Q9Y6R4 1608 aa22.1■■□□□ 1.13
CNOT3-208ENST00000613073 MROH2AA6NES4 1674 aa22.1■■□□□ 1.13
CNOT3-208ENST00000613073 IQGAP1P46940 1657 aa22.1■■□□□ 1.13
CNOT3-208ENST00000613073 YEATS2Q9ULM3 1422 aa22.1■■□□□ 1.13
CNOT3-208ENST00000613073 DIP2CQ9Y2E4 1556 aa22.08■■□□□ 1.12
CNOT3-208ENST00000613073 ABCC3O15438 1527 aa22.07■■□□□ 1.12
CNOT3-208ENST00000613073 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
CNOT3-208ENST00000613073 RICTORQ6R327 1708 aa22.07■■□□□ 1.12
CNOT3-208ENST00000613073 NOS1P29475 1434 aa22.06■■□□□ 1.12
CNOT3-208ENST00000613073 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.06■■□□□ 1.12
CNOT3-208ENST00000613073 BRD4O60885 1362 aaPredicted RBP22.05■■□□□ 1.12
CNOT3-208ENST00000613073 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
CNOT3-208ENST00000613073 NUTM2DQ5VT03 806 aaPredicted RBP22.04■■□□□ 1.12
CNOT3-208ENST00000613073 MYOM2P54296 1465 aa22.04■■□□□ 1.12
CNOT3-208ENST00000613073 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
CNOT3-208ENST00000613073 NLRP13Q86W25 1043 aa22.03■■□□□ 1.12
CNOT3-208ENST00000613073 EIF3AQ14152 1382 aaKnown RBP22.03■■□□□ 1.12
CNOT3-208ENST00000613073 TSPOAP1O95153 1857 aa22.02■■□□□ 1.12
CNOT3-208ENST00000613073 ADGRB3O60242 1522 aa22.02■■□□□ 1.11
CNOT3-208ENST00000613073 GLI2P10070 1586 aa22■■□□□ 1.11
CNOT3-208ENST00000613073 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
CNOT3-208ENST00000613073 IFT172Q9UG01 1749 aa22■■□□□ 1.11
CNOT3-208ENST00000613073 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
CNOT3-208ENST00000613073 KIAA1210Q9ULL0 1709 aa22■■□□□ 1.11
CNOT3-208ENST00000613073 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
CNOT3-208ENST00000613073 SIGLEC1Q9BZZ2 1709 aa21.99■■□□□ 1.11
CNOT3-208ENST00000613073 ERICH6BQ5W0A0 696 aa21.98■■□□□ 1.11
CNOT3-208ENST00000613073 KNSTRNQ9Y448 316 aa21.98■■□□□ 1.11
CNOT3-208ENST00000613073 TMEM132EQ6IEE7 984 aa21.98■■□□□ 1.11
CNOT3-208ENST00000613073 DIP2BQ9P265 1576 aa21.97■■□□□ 1.11
CNOT3-208ENST00000613073 TRAK1Q9UPV9 953 aa21.97■■□□□ 1.11
CNOT3-208ENST00000613073 LRPPRCP42704 1394 aaKnown RBP21.97■■□□□ 1.11
CNOT3-208ENST00000613073 NRXN1Q9ULB1 1477 aa21.96■■□□□ 1.11
CNOT3-208ENST00000613073 ANP32AP39687 249 aaKnown RBP21.95■■□□□ 1.1
CNOT3-208ENST00000613073 IDI1Q13907 227 aa21.95■■□□□ 1.1
CNOT3-208ENST00000613073 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
CNOT3-208ENST00000613073 SYNMO15061 1565 aa21.93■■□□□ 1.1
CNOT3-208ENST00000613073 C14orf93Q9H972 538 aaKnown RBP21.93■■□□□ 1.1
CNOT3-208ENST00000613073 PPLO60437 1756 aa21.92■■□□□ 1.1
CNOT3-208ENST00000613073 PIK3C2GO75747 1445 aa21.92■■□□□ 1.1
CNOT3-208ENST00000613073 IPO9Q96P70 1041 aaKnown RBP21.91■■□□□ 1.1
CNOT3-208ENST00000613073 AMER1Q5JTC6 1135 aaPredicted RBP21.9■■□□□ 1.1
CNOT3-208ENST00000613073 FBXO31Q5XUX0 539 aaPredicted RBP21.9■■□□□ 1.1
CNOT3-208ENST00000613073 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
CNOT3-208ENST00000613073 NUDCQ9Y266 331 aa21.9■■□□□ 1.1
CNOT3-208ENST00000613073 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
CNOT3-208ENST00000613073 CENPJQ9HC77 1338 aaPredicted RBP21.89■■□□□ 1.1
CNOT3-208ENST00000613073 SMG6Q86US8 1419 aaKnown RBP21.89■■□□□ 1.09
CNOT3-208ENST00000613073 ARHGAP31Q2M1Z3 1444 aa21.87■■□□□ 1.09
CNOT3-208ENST00000613073 KDM5AP29375 1690 aaKnown RBP21.87■■□□□ 1.09
CNOT3-208ENST00000613073 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
CNOT3-208ENST00000613073 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
CNOT3-208ENST00000613073 MLECQ14165 292 aa21.87■■□□□ 1.09
CNOT3-208ENST00000613073 MYOM1P52179 1685 aa21.87■■□□□ 1.09
CNOT3-208ENST00000613073 PIK3C2BO00750 1634 aa21.86■■□□□ 1.09
CNOT3-208ENST00000613073 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
CNOT3-208ENST00000613073 ZMYM4Q5VZL5 1548 aa21.85■■□□□ 1.09
CNOT3-208ENST00000613073 ZC3H13Q5T200 1668 aaKnown RBP21.84■■□□□ 1.09
CNOT3-208ENST00000613073 SLC24A1O60721 1099 aa21.84■■□□□ 1.09
CNOT3-208ENST00000613073 SLC52A1Q9NWF4 448 aa21.84■■□□□ 1.09
CNOT3-208ENST00000613073 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
CNOT3-208ENST00000613073 SETBP1Q9Y6X0 1596 aa21.83■■□□□ 1.09
CNOT3-208ENST00000613073 ADGRB1O14514 1584 aa21.83■■□□□ 1.08
CNOT3-208ENST00000613073 CARD14Q9BXL6 1004 aa21.82■■□□□ 1.08
CNOT3-208ENST00000613073 NEXMIFQ5QGS0 1516 aa21.82■■□□□ 1.08
CNOT3-208ENST00000613073 ASXL1Q8IXJ9 1541 aa21.82■■□□□ 1.08
CNOT3-208ENST00000613073 SAFB2Q14151 953 aaKnown RBP eCLIP21.81■■□□□ 1.08
CNOT3-208ENST00000613073 STK26Q9P289 416 aa21.8■■□□□ 1.08
CNOT3-208ENST00000613073 PREX1Q8TCU6 1659 aa21.79■■□□□ 1.08
CNOT3-208ENST00000613073 ADAMTS8Q9UP79 889 aa21.79■■□□□ 1.08
CNOT3-208ENST00000613073 MYO5BQ9ULV0 1848 aa21.79■■□□□ 1.08
CNOT3-208ENST00000613073 MYO3AQ8NEV4 1616 aa21.79■■□□□ 1.08
CNOT3-208ENST00000613073 SBNO2Q9Y2G9 1366 aa21.78■■□□□ 1.08
CNOT3-208ENST00000613073 SLC12A5Q9H2X9 1139 aa21.78■■□□□ 1.08
CNOT3-208ENST00000613073 STAG3Q9UJ98 1225 aa21.78■■□□□ 1.08
CNOT3-208ENST00000613073 QRICH2Q9H0J4 1663 aa21.76■■□□□ 1.07
CNOT3-208ENST00000613073 NEFMP07197 916 aa21.76■■□□□ 1.07
CNOT3-208ENST00000613073 WDR43Q15061 677 aaKnown RBP eCLIP21.75■■□□□ 1.07
CNOT3-208ENST00000613073 CDCA7LQ96GN5 454 aa21.75■■□□□ 1.07
CNOT3-208ENST00000613073 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms