RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 TMEM2Q9UHN6 1383 aa27.41■■□□□ 1.98
SCFD2-204ENST00000611795 SLIT1O75093 1534 aa27.41■■□□□ 1.98
SCFD2-204ENST00000611795 RIMS2Q9UQ26 1411 aa27.4■■□□□ 1.98
SCFD2-204ENST00000611795 MYOM2P54296 1465 aa27.39■■□□□ 1.98
SCFD2-204ENST00000611795 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
SCFD2-204ENST00000611795 PPP1R15AO75807 674 aaPredicted RBP27.38■■□□□ 1.97
SCFD2-204ENST00000611795 THEMISQ8N1K5 641 aaPredicted RBP27.38■■□□□ 1.97
SCFD2-204ENST00000611795 KDM2AQ9Y2K7 1162 aa27.38■■□□□ 1.97
SCFD2-204ENST00000611795 ZEB1P37275 1124 aaPredicted RBP27.36■■□□□ 1.97
SCFD2-204ENST00000611795 NUTM2DQ5VT03 806 aaPredicted RBP27.36■■□□□ 1.97
SCFD2-204ENST00000611795 NRXN1Q9ULB1 1477 aa27.35■■□□□ 1.97
SCFD2-204ENST00000611795 ADGRF5Q8IZF2 1346 aa27.34■■□□□ 1.97
SCFD2-204ENST00000611795 NBPF8Q3BBV2 869 aa27.33■■□□□ 1.97
SCFD2-204ENST00000611795 PRAG1Q86YV5 1406 aa27.33■■□□□ 1.97
SCFD2-204ENST00000611795 LTKP29376 864 aa27.32■■□□□ 1.96
SCFD2-204ENST00000611795 STAC3Q96MF2 364 aa27.31■■□□□ 1.96
SCFD2-204ENST00000611795 VGFO15240 615 aaPredicted RBP27.28■■□□□ 1.96
SCFD2-204ENST00000611795 PIK3C2GO75747 1445 aa27.28■■□□□ 1.96
SCFD2-204ENST00000611795 TXNDC2Q86VQ3 553 aa27.27■■□□□ 1.96
SCFD2-204ENST00000611795 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.27■■□□□ 1.96
SCFD2-204ENST00000611795 SCAF11Q99590 1463 aaKnown RBP27.27■■□□□ 1.96
SCFD2-204ENST00000611795 HSPA2P54652 639 aa27.26■■□□□ 1.95
SCFD2-204ENST00000611795 NRXN3Q9Y4C0 1643 aa27.25■■□□□ 1.95
SCFD2-204ENST00000611795 TRPM1Q7Z4N2 1603 aa27.23■■□□□ 1.95
SCFD2-204ENST00000611795 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
SCFD2-204ENST00000611795 EID1Q9Y6B2 187 aa27.22■■□□□ 1.95
SCFD2-204ENST00000611795 POLR1AO95602 1720 aaPredicted RBP27.22■■□□□ 1.95
SCFD2-204ENST00000611795 SETBP1Q9Y6X0 1596 aa27.22■■□□□ 1.95
SCFD2-204ENST00000611795 PLEKHG1Q9ULL1 1385 aa27.21■■□□□ 1.95
SCFD2-204ENST00000611795 IQGAP1P46940 1657 aa27.21■■□□□ 1.95
SCFD2-204ENST00000611795 ANKLE2Q86XL3 938 aa27.2■■□□□ 1.95
SCFD2-204ENST00000611795 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.95
SCFD2-204ENST00000611795 RALGAPBQ86X10 1494 aa27.19■■□□□ 1.94
SCFD2-204ENST00000611795 NCKAP5LQ9HCH0 1330 aa27.19■■□□□ 1.94
SCFD2-204ENST00000611795 KIAA1210Q9ULL0 1709 aa27.18■■□□□ 1.94
SCFD2-204ENST00000611795 SETD1AO15047 1707 aaKnown RBP27.18■■□□□ 1.94
SCFD2-204ENST00000611795 CFAP70Q5T0N1 1121 aa27.17■■□□□ 1.94
SCFD2-204ENST00000611795 ALKQ9UM73 1620 aa27.17■■□□□ 1.94
SCFD2-204ENST00000611795 ADAMTS13Q76LX8 1427 aa27.17■■□□□ 1.94
SCFD2-204ENST00000611795 MED14O60244 1454 aa27.17■■□□□ 1.94
SCFD2-204ENST00000611795 C14orf93Q9H972 538 aaKnown RBP27.16■■□□□ 1.94
SCFD2-204ENST00000611795 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
SCFD2-204ENST00000611795 LAMC1P11047 1609 aa27.15■■□□□ 1.94
SCFD2-204ENST00000611795 NBPF1Q3BBV0 1214 aa27.15■■□□□ 1.94
SCFD2-204ENST00000611795 ASXL1Q8IXJ9 1541 aa27.14■■□□□ 1.94
SCFD2-204ENST00000611795 NPHP4O75161 1426 aaPredicted RBP27.13■■□□□ 1.93
SCFD2-204ENST00000611795 ADGRB1O14514 1584 aa27.12■■□□□ 1.93
SCFD2-204ENST00000611795 GPRASP1Q5JY77 1395 aa27.1■■□□□ 1.93
SCFD2-204ENST00000611795 ROCK2O75116 1388 aaKnown RBP27.08■■□□□ 1.93
SCFD2-204ENST00000611795 DIP2AQ14689 1571 aa27.08■■□□□ 1.93
SCFD2-204ENST00000611795 BCANQ96GW7 911 aa27.07■■□□□ 1.92
SCFD2-204ENST00000611795 SLC26A8Q96RN1 970 aa27.07■■□□□ 1.92
SCFD2-204ENST00000611795 METP08581 1390 aa27.06■■□□□ 1.92
SCFD2-204ENST00000611795 TMEM132EQ6IEE7 984 aa27.06■■□□□ 1.92
SCFD2-204ENST00000611795 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
SCFD2-204ENST00000611795 TBX22Q9Y458 520 aa27.04■■□□□ 1.92
SCFD2-204ENST00000611795 CARD11Q9BXL7 1154 aa27■■□□□ 1.91
SCFD2-204ENST00000611795 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
SCFD2-204ENST00000611795 YTHDC2Q9H6S0 1430 aaKnown RBP26.97■■□□□ 1.91
SCFD2-204ENST00000611795 LRPPRCP42704 1394 aaKnown RBP26.96■■□□□ 1.91
SCFD2-204ENST00000611795 PIK3R4Q99570 1358 aa26.94■■□□□ 1.9
SCFD2-204ENST00000611795 USP47Q96K76 1375 aa26.93■■□□□ 1.9
SCFD2-204ENST00000611795 KNDC1Q76NI1 1749 aa26.93■■□□□ 1.9
SCFD2-204ENST00000611795 XRN1Q8IZH2 1706 aaKnown RBP26.93■■□□□ 1.9
SCFD2-204ENST00000611795 CHD2O14647 1828 aaKnown RBP26.92■■□□□ 1.9
SCFD2-204ENST00000611795 STK26Q9P289 416 aa26.91■■□□□ 1.9
SCFD2-204ENST00000611795 ARHGEF28Q8N1W1 1705 aaKnown RBP26.91■■□□□ 1.9
SCFD2-204ENST00000611795 ABCC11Q96J66 1382 aa26.91■■□□□ 1.9
SCFD2-204ENST00000611795 TECPR2O15040 1411 aa26.91■■□□□ 1.9
SCFD2-204ENST00000611795 TRAK1Q9UPV9 953 aa26.9■■□□□ 1.9
SCFD2-204ENST00000611795 NWD1Q149M9 1564 aa26.89■■□□□ 1.9
SCFD2-204ENST00000611795 CPS1P31327 1500 aa26.89■■□□□ 1.89
SCFD2-204ENST00000611795 DLC1Q96QB1 1528 aa26.89■■□□□ 1.89
SCFD2-204ENST00000611795 HSPA5P11021 654 aaKnown RBP26.88■■□□□ 1.89
SCFD2-204ENST00000611795 AMOTL2Q9Y2J4 779 aa26.87■■□□□ 1.89
SCFD2-204ENST00000611795 STRCP1A6NGW2 1772 aa26.86■■□□□ 1.89
SCFD2-204ENST00000611795 EIF4G2P78344 907 aaKnown RBP eCLIP26.86■■□□□ 1.89
SCFD2-204ENST00000611795 ROBO2Q9HCK4 1378 aa26.85■■□□□ 1.89
SCFD2-204ENST00000611795 KCNA6P17658 529 aa26.84■■□□□ 1.89
SCFD2-204ENST00000611795 DMRT2Q9Y5R5 561 aa26.84■■□□□ 1.89
SCFD2-204ENST00000611795 PTCH1Q13635 1447 aa26.83■■□□□ 1.89
SCFD2-204ENST00000611795 HIRIP3Q9BW71 556 aaPredicted RBP26.83■■□□□ 1.89
SCFD2-204ENST00000611795 PLEKHH1Q9ULM0 1364 aa26.82■■□□□ 1.88
SCFD2-204ENST00000611795 ST20-MTHFSA0A0A6YYL1 179 aa26.82■■□□□ 1.88
SCFD2-204ENST00000611795 SIRT1Q96EB6 747 aa26.81■■□□□ 1.88
SCFD2-204ENST00000611795 EIF3AQ14152 1382 aaKnown RBP26.8■■□□□ 1.88
SCFD2-204ENST00000611795 FAM135BQ49AJ0 1406 aa26.8■■□□□ 1.88
SCFD2-204ENST00000611795 PRAM1Q96QH2 718 aa26.8■■□□□ 1.88
SCFD2-204ENST00000611795 WAPLQ7Z5K2 1190 aa26.79■■□□□ 1.88
SCFD2-204ENST00000611795 QRICH2Q9H0J4 1663 aa26.79■■□□□ 1.88
SCFD2-204ENST00000611795 CENPJQ9HC77 1338 aaPredicted RBP26.78■■□□□ 1.88
SCFD2-204ENST00000611795 TESK2Q96S53 571 aa26.77■■□□□ 1.88
SCFD2-204ENST00000611795 ZNF335Q9H4Z2 1342 aaPredicted RBP26.77■■□□□ 1.88
SCFD2-204ENST00000611795 NKTRP30414 1462 aaKnown RBP26.76■■□□□ 1.87
SCFD2-204ENST00000611795 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.74■■□□□ 1.87
SCFD2-204ENST00000611795 SAFB2Q14151 953 aaKnown RBP eCLIP26.73■■□□□ 1.87
SCFD2-204ENST00000611795 SBNO2Q9Y2G9 1366 aa26.72■■□□□ 1.87
SCFD2-204ENST00000611795 POGKQ9P215 609 aa26.72■■□□□ 1.87
SCFD2-204ENST00000611795 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
SCFD2-204ENST00000611795 RBM33Q96EV2 1170 aaKnown RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms