RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 RLBP1P12271 317 aa21.84■■□□□ 1.09
MTHFD1L-211ENST00000611279 PODXL2Q9NZ53 605 aa21.84■■□□□ 1.09
MTHFD1L-211ENST00000611279 R3HCC1Q9Y3T6 440 aaKnown RBP21.83■■□□□ 1.09
MTHFD1L-211ENST00000611279 FSD2A1L4K1 749 aa21.83■■□□□ 1.08
MTHFD1L-211ENST00000611279 BLMP54132 1417 aaPredicted RBP21.82■■□□□ 1.08
MTHFD1L-211ENST00000611279 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
MTHFD1L-211ENST00000611279 PDE3AQ14432 1141 aa21.82■■□□□ 1.08
MTHFD1L-211ENST00000611279 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
MTHFD1L-211ENST00000611279 GAS2L3Q86XJ1 694 aa21.81■■□□□ 1.08
MTHFD1L-211ENST00000611279 ITPRIPQ8IWB1 547 aa21.81■■□□□ 1.08
MTHFD1L-211ENST00000611279 GBP4Q96PP9 640 aa21.81■■□□□ 1.08
MTHFD1L-211ENST00000611279 TPRNQ4KMQ1 711 aa21.8■■□□□ 1.08
MTHFD1L-211ENST00000611279 MBD5Q9P267 1494 aa21.8■■□□□ 1.08
MTHFD1L-211ENST00000611279 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
MTHFD1L-211ENST00000611279 EIF3AQ14152 1382 aaKnown RBP21.79■■□□□ 1.08
MTHFD1L-211ENST00000611279 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
MTHFD1L-211ENST00000611279 ZMYM4Q5VZL5 1548 aa21.79■■□□□ 1.08
MTHFD1L-211ENST00000611279 KIAA0586Q9BVV6 1533 aa21.79■■□□□ 1.08
MTHFD1L-211ENST00000611279 KIF14Q15058 1648 aa21.79■■□□□ 1.08
MTHFD1L-211ENST00000611279 DDX49Q9Y6V7 483 aaKnown RBP21.79■■□□□ 1.08
MTHFD1L-211ENST00000611279 NKTRP30414 1462 aaKnown RBP21.78■■□□□ 1.08
MTHFD1L-211ENST00000611279 CUL7Q14999 1698 aa21.77■■□□□ 1.08
MTHFD1L-211ENST00000611279 NASPP49321 788 aaPredicted RBP21.77■■□□□ 1.08
MTHFD1L-211ENST00000611279 TNPO1Q92973 898 aaKnown RBP21.77■■□□□ 1.08
MTHFD1L-211ENST00000611279 GOLGA6L22H0YM25 854 aa21.76■■□□□ 1.07
MTHFD1L-211ENST00000611279 CAMSAP2Q08AD1 1489 aa21.76■■□□□ 1.07
MTHFD1L-211ENST00000611279 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
MTHFD1L-211ENST00000611279 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
MTHFD1L-211ENST00000611279 PLEKHG5O94827 1062 aa21.76■■□□□ 1.07
MTHFD1L-211ENST00000611279 WWC1Q8IX03 1113 aa21.76■■□□□ 1.07
MTHFD1L-211ENST00000611279 LNPKQ9C0E8 428 aa21.75■■□□□ 1.07
MTHFD1L-211ENST00000611279 AMER1Q5JTC6 1135 aaPredicted RBP21.75■■□□□ 1.07
MTHFD1L-211ENST00000611279 PRDM10Q9NQV6 1147 aa21.74■■□□□ 1.07
MTHFD1L-211ENST00000611279 UHRF1BP1Q6BDS2 1440 aa21.74■■□□□ 1.07
MTHFD1L-211ENST00000611279 PLEKHH2Q8IVE3 1493 aa21.73■■□□□ 1.07
MTHFD1L-211ENST00000611279 TPM2P07951 284 aa21.73■■□□□ 1.07
MTHFD1L-211ENST00000611279 CDCA8Q53HL2 280 aa21.73■■□□□ 1.07
MTHFD1L-211ENST00000611279 ZNF521Q96K83 1311 aa21.73■■□□□ 1.07
MTHFD1L-211ENST00000611279 RARSP54136 660 aaKnown RBP21.72■■□□□ 1.07
MTHFD1L-211ENST00000611279 PDCL3Q9H2J4 239 aa21.72■■□□□ 1.07
MTHFD1L-211ENST00000611279 SMC4Q9NTJ3 1288 aa21.72■■□□□ 1.07
MTHFD1L-211ENST00000611279 SAMD9Q5K651 1589 aa21.72■■□□□ 1.07
MTHFD1L-211ENST00000611279 FOXD4L5Q5VV16 416 aaPredicted RBP21.71■■□□□ 1.07
MTHFD1L-211ENST00000611279 FOXD4L4Q8WXT5 416 aaPredicted RBP21.71■■□□□ 1.07
MTHFD1L-211ENST00000611279 TCP11L2Q8N4U5 519 aa21.71■■□□□ 1.07
MTHFD1L-211ENST00000611279 DNTTIP2Q5QJE6 756 aaKnown RBP21.7■■□□□ 1.06
MTHFD1L-211ENST00000611279 MPNDQ8N594 471 aa21.7■■□□□ 1.06
MTHFD1L-211ENST00000611279 MORC1Q86VD1 984 aa21.7■■□□□ 1.06
MTHFD1L-211ENST00000611279 XPCQ01831 940 aaPredicted RBP21.7■■□□□ 1.06
MTHFD1L-211ENST00000611279 TSR2Q969E8 191 aaKnown RBP21.69■■□□□ 1.06
MTHFD1L-211ENST00000611279 C9orf84Q5VXU9 1444 aa21.68■■□□□ 1.06
MTHFD1L-211ENST00000611279 DNMT1P26358 1616 aaKnown RBP21.67■■□□□ 1.06
MTHFD1L-211ENST00000611279 U2AF1L5P0DN76 240 aaPredicted RBP21.67■■□□□ 1.06
MTHFD1L-211ENST00000611279 CHGAP10645 457 aaKnown RBP21.67■■□□□ 1.06
MTHFD1L-211ENST00000611279 U2AF1Q01081 240 aaKnown RBP eCLIP21.67■■□□□ 1.063e-7■■■■□ 20.5
MTHFD1L-211ENST00000611279 DZIP1LQ8IYY4 767 aaKnown RBP21.67■■□□□ 1.06
MTHFD1L-211ENST00000611279 PRAG1Q86YV5 1406 aa21.66■■□□□ 1.06
MTHFD1L-211ENST00000611279 CAVIN1Q6NZI2 390 aaKnown RBP21.66■■□□□ 1.06
MTHFD1L-211ENST00000611279 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
MTHFD1L-211ENST00000611279 PTMAP06454 111 aaKnown RBP21.66■■□□□ 1.06
MTHFD1L-211ENST00000611279 SSFA2P28290 1259 aa21.66■■□□□ 1.06
MTHFD1L-211ENST00000611279 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
MTHFD1L-211ENST00000611279 MCTP1Q6DN14 999 aa21.65■■□□□ 1.06
MTHFD1L-211ENST00000611279 ZKSCAN2Q63HK3 967 aa21.65■■□□□ 1.06
MTHFD1L-211ENST00000611279 ZSCAN30Q86W11 494 aa21.65■■□□□ 1.06
MTHFD1L-211ENST00000611279 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
MTHFD1L-211ENST00000611279 ZHX1Q9UKY1 873 aaPredicted RBP21.64■■□□□ 1.06
MTHFD1L-211ENST00000611279 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
MTHFD1L-211ENST00000611279 TRMT2AQ8IZ69 625 aaKnown RBP21.62■■□□□ 1.05
MTHFD1L-211ENST00000611279 CCDC173Q0VFZ6 552 aa21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 RNF214Q8ND24 703 aa21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 UQCRHLA0A096LP55 91 aa21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 UQCRHP07919 91 aa21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 MVPQ14764 893 aaKnown RBP21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 SKOR2Q2VWA4 1001 aaPredicted RBP21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 ANKRD45Q5TZF3 282 aa21.61■■□□□ 1.05
MTHFD1L-211ENST00000611279 TROQ12816 1431 aaPredicted RBP21.6■■□□□ 1.05
MTHFD1L-211ENST00000611279 FOXD4L6Q3SYB3 417 aaPredicted RBP21.6■■□□□ 1.05
MTHFD1L-211ENST00000611279 FOXD4L3Q6VB84 417 aaPredicted RBP21.6■■□□□ 1.05
MTHFD1L-211ENST00000611279 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
MTHFD1L-211ENST00000611279 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
MTHFD1L-211ENST00000611279 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
MTHFD1L-211ENST00000611279 APBB1O00213 710 aa21.58■■□□□ 1.04
MTHFD1L-211ENST00000611279 C1orf115Q9H7X2 142 aa21.57■■□□□ 1.04
MTHFD1L-211ENST00000611279 NUP153P49790 1475 aaKnown RBP21.57■■□□□ 1.04
MTHFD1L-211ENST00000611279 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
MTHFD1L-211ENST00000611279 RUNDC1Q96C34 613 aa21.56■■□□□ 1.04
MTHFD1L-211ENST00000611279 PLB1Q6P1J6 1458 aa21.56■■□□□ 1.04
MTHFD1L-211ENST00000611279 WDR62O43379 1518 aa21.56■■□□□ 1.04
MTHFD1L-211ENST00000611279 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
MTHFD1L-211ENST00000611279 ZNF608Q9ULD9 1512 aaPredicted RBP21.55■■□□□ 1.04
MTHFD1L-211ENST00000611279 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
MTHFD1L-211ENST00000611279 CD2BP2O95400 341 aaKnown RBP21.55■■□□□ 1.04
MTHFD1L-211ENST00000611279 PLCB2Q00722 1185 aa21.54■■□□□ 1.04
MTHFD1L-211ENST00000611279 MTHFSP49914 203 aa21.54■■□□□ 1.04
MTHFD1L-211ENST00000611279 ISY1Q9ULR0 285 aaKnown RBP21.54■■□□□ 1.04
MTHFD1L-211ENST00000611279 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
MTHFD1L-211ENST00000611279 CFAP53Q96M91 514 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms