RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SPINK5Q9NQ38 1064 aaPredicted RBP22.06■■□□□ 1.12
TNIP1-220ENST00000610535 SLFN5Q08AF3 891 aa22.06■■□□□ 1.12
TNIP1-220ENST00000610535 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
TNIP1-220ENST00000610535 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.05■■□□□ 1.12
TNIP1-220ENST00000610535 MYO5CQ9NQX4 1742 aa22.05■■□□□ 1.12
TNIP1-220ENST00000610535 FRAT2O75474 233 aaPredicted RBP22.03■■□□□ 1.12
TNIP1-220ENST00000610535 BCAR3O75815 825 aa22.03■■□□□ 1.12
TNIP1-220ENST00000610535 UNC13BO14795 1591 aa22.02■■□□□ 1.12
TNIP1-220ENST00000610535 EIF2AK4Q9P2K8 1649 aaKnown RBP22.01■■□□□ 1.11
TNIP1-220ENST00000610535 APAF1O14727 1248 aa22.01■■□□□ 1.11
TNIP1-220ENST00000610535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.111e-6■■■□□ 14.6
TNIP1-220ENST00000610535 PREX2Q70Z35 1606 aa22■■□□□ 1.11
TNIP1-220ENST00000610535 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
TNIP1-220ENST00000610535 AFAP1Q8N556 730 aa21.98■■□□□ 1.11
TNIP1-220ENST00000610535 IGHDP01880 384 aa21.97■■□□□ 1.11
TNIP1-220ENST00000610535 ABCC2Q92887 1545 aa21.97■■□□□ 1.11
TNIP1-220ENST00000610535 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
TNIP1-220ENST00000610535 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
TNIP1-220ENST00000610535 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
TNIP1-220ENST00000610535 ATP10AO60312 1499 aa21.94■■□□□ 1.1
TNIP1-220ENST00000610535 CDCA8Q53HL2 280 aa21.92■■□□□ 1.1
TNIP1-220ENST00000610535 RNF17Q9BXT8 1623 aaKnown RBP21.92■■□□□ 1.1
TNIP1-220ENST00000610535 MAST1Q9Y2H9 1570 aa21.92■■□□□ 1.1
TNIP1-220ENST00000610535 ASXL1Q8IXJ9 1541 aa21.91■■□□□ 1.1
TNIP1-220ENST00000610535 NKTRP30414 1462 aaKnown RBP21.91■■□□□ 1.1
TNIP1-220ENST00000610535 PIK3C2GO75747 1445 aa21.91■■□□□ 1.1
TNIP1-220ENST00000610535 SEC24BO95487 1268 aa21.91■■□□□ 1.1
TNIP1-220ENST00000610535 USP19O94966 1318 aa21.9■■□□□ 1.1
TNIP1-220ENST00000610535 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
TNIP1-220ENST00000610535 EIF3AQ14152 1382 aaKnown RBP21.9■■□□□ 1.1
TNIP1-220ENST00000610535 E9PSI1 815 aa21.88■■□□□ 1.09
TNIP1-220ENST00000610535 TRAPPC8Q9Y2L5 1435 aa21.88■■□□□ 1.09
TNIP1-220ENST00000610535 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
TNIP1-220ENST00000610535 PANK1Q8TE04 598 aa21.87■■□□□ 1.09
TNIP1-220ENST00000610535 DUOX2Q9NRD8 1548 aa21.87■■□□□ 1.09
TNIP1-220ENST00000610535 COG6Q9Y2V7 657 aa21.87■■□□□ 1.09
TNIP1-220ENST00000610535 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
TNIP1-220ENST00000610535 SCAF11Q99590 1463 aaKnown RBP21.86■■□□□ 1.09
TNIP1-220ENST00000610535 PLXNC1O60486 1568 aa21.86■■□□□ 1.09
TNIP1-220ENST00000610535 MADDQ8WXG6 1647 aa21.86■■□□□ 1.09
TNIP1-220ENST00000610535 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
TNIP1-220ENST00000610535 SYNMO15061 1565 aa21.85■■□□□ 1.09
TNIP1-220ENST00000610535 CARD14Q9BXL6 1004 aa21.83■■□□□ 1.09
TNIP1-220ENST00000610535 CANXP27824 592 aaKnown RBP21.83■■□□□ 1.08
TNIP1-220ENST00000610535 CLUAP1Q96AJ1 413 aa21.82■■□□□ 1.08
TNIP1-220ENST00000610535 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
TNIP1-220ENST00000610535 EIF5BO60841 1220 aaKnown RBP21.82■■□□□ 1.08
TNIP1-220ENST00000610535 SPAG9O60271 1321 aaKnown RBP21.81■■□□□ 1.08
TNIP1-220ENST00000610535 CGNL1Q0VF96 1302 aa21.81■■□□□ 1.08
TNIP1-220ENST00000610535 PDE3AQ14432 1141 aa21.81■■□□□ 1.08
TNIP1-220ENST00000610535 PLCH2O75038 1416 aa21.81■■□□□ 1.08
TNIP1-220ENST00000610535 CENPJQ9HC77 1338 aaPredicted RBP21.8■■□□□ 1.08
TNIP1-220ENST00000610535 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
TNIP1-220ENST00000610535 SLKQ9H2G2 1235 aaPredicted RBP21.8■■□□□ 1.08
TNIP1-220ENST00000610535 POGKQ9P215 609 aa21.8■■□□□ 1.08
TNIP1-220ENST00000610535 WWC1Q8IX03 1113 aa21.79■■□□□ 1.08
TNIP1-220ENST00000610535 MYOM1P52179 1685 aa21.79■■□□□ 1.08
TNIP1-220ENST00000610535 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
TNIP1-220ENST00000610535 SCAPERQ9BY12 1400 aa21.77■■□□□ 1.08
TNIP1-220ENST00000610535 RRP7AQ9Y3A4 280 aaKnown RBP21.77■■□□□ 1.08
TNIP1-220ENST00000610535 TNNQ9UQP3 1299 aa21.76■■□□□ 1.07
TNIP1-220ENST00000610535 MAPK8IP3Q9UPT6 1336 aa21.76■■□□□ 1.07
TNIP1-220ENST00000610535 TNNT2P45379 298 aaPredicted RBP21.74■■□□□ 1.07
TNIP1-220ENST00000610535 KIF3BO15066 747 aa21.73■■□□□ 1.07
TNIP1-220ENST00000610535 BECN1Q14457 450 aa21.73■■□□□ 1.07
TNIP1-220ENST00000610535 PCDHB15Q9Y5E8 787 aa21.73■■□□□ 1.07
TNIP1-220ENST00000610535 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
TNIP1-220ENST00000610535 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
TNIP1-220ENST00000610535 RLBP1P12271 317 aa21.72■■□□□ 1.07
TNIP1-220ENST00000610535 STAC3Q96MF2 364 aa21.72■■□□□ 1.07
TNIP1-220ENST00000610535 CLTCL1P53675 1640 aa21.71■■□□□ 1.07
TNIP1-220ENST00000610535 TRPM2O94759 1503 aa21.71■■□□□ 1.07
TNIP1-220ENST00000610535 RARSP54136 660 aaKnown RBP21.71■■□□□ 1.07
TNIP1-220ENST00000610535 NGEFQ8N5V2 710 aa21.71■■□□□ 1.07
TNIP1-220ENST00000610535 ERVK-7P63135 1459 aa21.7■■□□□ 1.06
TNIP1-220ENST00000610535 ARXQ96QS3 562 aa21.7■■□□□ 1.06
TNIP1-220ENST00000610535 KDM5AP29375 1690 aaKnown RBP21.7■■□□□ 1.06
TNIP1-220ENST00000610535 ADGRF5Q8IZF2 1346 aa21.7■■□□□ 1.06
TNIP1-220ENST00000610535 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
TNIP1-220ENST00000610535 PTPRTO14522 1441 aa21.69■■□□□ 1.06
TNIP1-220ENST00000610535 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
TNIP1-220ENST00000610535 NLRP1Q9C000 1473 aa21.69■■□□□ 1.06
TNIP1-220ENST00000610535 ANTXR1Q9H6X2 564 aa21.68■■□□□ 1.06
TNIP1-220ENST00000610535 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
TNIP1-220ENST00000610535 PDZRN3Q9UPQ7 1066 aa21.68■■□□□ 1.06
TNIP1-220ENST00000610535 TCP11L2Q8N4U5 519 aa21.67■■□□□ 1.06
TNIP1-220ENST00000610535 ABCC1P33527 1531 aa21.67■■□□□ 1.06
TNIP1-220ENST00000610535 CEP152O94986 1710 aa21.66■■□□□ 1.06
TNIP1-220ENST00000610535 NINLQ9Y2I6 1382 aa21.66■■□□□ 1.06
TNIP1-220ENST00000610535 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
TNIP1-220ENST00000610535 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
TNIP1-220ENST00000610535 POLR3AO14802 1390 aaPredicted RBP21.66■■□□□ 1.06
TNIP1-220ENST00000610535 UHRF1BP1LA0JNW5 1464 aa21.66■■□□□ 1.06
TNIP1-220ENST00000610535 FANCAO15360 1455 aa21.66■■□□□ 1.06
TNIP1-220ENST00000610535 SPRYD3Q8NCJ5 442 aa21.65■■□□□ 1.06
TNIP1-220ENST00000610535 TBC1D2Q9BYX2 928 aa21.65■■□□□ 1.06
TNIP1-220ENST00000610535 MORC1Q86VD1 984 aa21.65■■□□□ 1.06
TNIP1-220ENST00000610535 TBC1D32Q96NH3 1257 aa21.64■■□□□ 1.06
TNIP1-220ENST00000610535 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.05
TNIP1-220ENST00000610535 RUNDC1Q96C34 613 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms