RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 SHPRHQ149N8 1683 aa20.28■□□□□ 0.84
LINC01278-206ENST00000610088 TET3O43151 1660 aa20.26■□□□□ 0.83
LINC01278-206ENST00000610088 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
LINC01278-206ENST00000610088 C8orf37Q96NL8 207 aa20.26■□□□□ 0.83
LINC01278-206ENST00000610088 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
LINC01278-206ENST00000610088 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
LINC01278-206ENST00000610088 EFCAB6Q5THR3 1501 aa20.23■□□□□ 0.83
LINC01278-206ENST00000610088 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
LINC01278-206ENST00000610088 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
LINC01278-206ENST00000610088 ATF3P18847 181 aa20.22■□□□□ 0.83
LINC01278-206ENST00000610088 IDI1Q13907 227 aa20.21■□□□□ 0.83
LINC01278-206ENST00000610088 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
LINC01278-206ENST00000610088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.82
LINC01278-206ENST00000610088 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
LINC01278-206ENST00000610088 ARHGAP31Q2M1Z3 1444 aa20.19■□□□□ 0.82
LINC01278-206ENST00000610088 NGLY1Q96IV0 654 aa20.19■□□□□ 0.82
LINC01278-206ENST00000610088 ARHGEF5Q12774 1597 aa20.19■□□□□ 0.82
LINC01278-206ENST00000610088 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
LINC01278-206ENST00000610088 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
LINC01278-206ENST00000610088 DIP2AQ14689 1571 aa20.16■□□□□ 0.82
LINC01278-206ENST00000610088 C19orf44Q9H6X5 657 aa20.15■□□□□ 0.82
LINC01278-206ENST00000610088 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
LINC01278-206ENST00000610088 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
LINC01278-206ENST00000610088 NCOA3Q9Y6Q9 1424 aa20.12■□□□□ 0.81
LINC01278-206ENST00000610088 ADAMTS2O95450 1211 aa20.12■□□□□ 0.81
LINC01278-206ENST00000610088 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
LINC01278-206ENST00000610088 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.1■□□□□ 0.81
LINC01278-206ENST00000610088 EP400Q96L91 3159 aa20.1■□□□□ 0.81
LINC01278-206ENST00000610088 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
LINC01278-206ENST00000610088 CHD2O14647 1828 aaKnown RBP20.1■□□□□ 0.81
LINC01278-206ENST00000610088 SETD5Q9C0A6 1442 aa20.08■□□□□ 0.8
LINC01278-206ENST00000610088 PLEKHG1Q9ULL1 1385 aa20.08■□□□□ 0.8
LINC01278-206ENST00000610088 ADGRB3O60242 1522 aa20.07■□□□□ 0.8
LINC01278-206ENST00000610088 DUOX2Q9NRD8 1548 aa20.07■□□□□ 0.8
LINC01278-206ENST00000610088 CCDC125Q86Z20 511 aa20.07■□□□□ 0.8
LINC01278-206ENST00000610088 USP21Q9UK80 565 aa20.07■□□□□ 0.8
LINC01278-206ENST00000610088 KANK1Q14678 1352 aa20.07■□□□□ 0.8
LINC01278-206ENST00000610088 PTPN23Q9H3S7 1636 aa20.06■□□□□ 0.8
LINC01278-206ENST00000610088 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
LINC01278-206ENST00000610088 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
LINC01278-206ENST00000610088 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
LINC01278-206ENST00000610088 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
LINC01278-206ENST00000610088 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
LINC01278-206ENST00000610088 PNPLA6Q8IY17 1366 aa20.04■□□□□ 0.8
LINC01278-206ENST00000610088 CROCC2H7BZ55 1655 aa20.03■□□□□ 0.8
LINC01278-206ENST00000610088 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
LINC01278-206ENST00000610088 KIF15Q9NS87 1388 aa20.02■□□□□ 0.8
LINC01278-206ENST00000610088 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
LINC01278-206ENST00000610088 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
LINC01278-206ENST00000610088 ZFYVE9O95405 1425 aa20■□□□□ 0.79
LINC01278-206ENST00000610088 ERBINQ96RT1 1412 aa19.98■□□□□ 0.79
LINC01278-206ENST00000610088 NOS1P29475 1434 aa19.97■□□□□ 0.79
LINC01278-206ENST00000610088 AMOTL2Q9Y2J4 779 aa19.97■□□□□ 0.79
LINC01278-206ENST00000610088 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
LINC01278-206ENST00000610088 DEFB132Q7Z7B7 95 aa19.96■□□□□ 0.79
LINC01278-206ENST00000610088 NHSL1Q5SYE7 1610 aa19.95■□□□□ 0.78
LINC01278-206ENST00000610088 MST1RQ04912 1400 aa19.94■□□□□ 0.78
LINC01278-206ENST00000610088 LRP5O75197 1615 aa19.94■□□□□ 0.78
LINC01278-206ENST00000610088 ATRNO75882 1429 aa19.93■□□□□ 0.78
LINC01278-206ENST00000610088 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
LINC01278-206ENST00000610088 DCCP43146 1447 aa19.93■□□□□ 0.78
LINC01278-206ENST00000610088 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
LINC01278-206ENST00000610088 FNBP4Q8N3X1 1017 aaPredicted RBP19.92■□□□□ 0.78
LINC01278-206ENST00000610088 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
LINC01278-206ENST00000610088 LMTK2Q8IWU2 1503 aa19.92■□□□□ 0.78
LINC01278-206ENST00000610088 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
LINC01278-206ENST00000610088 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
LINC01278-206ENST00000610088 ABCC5O15440 1437 aa19.91■□□□□ 0.78
LINC01278-206ENST00000610088 DAPK1P53355 1430 aa19.91■□□□□ 0.78
LINC01278-206ENST00000610088 BLMP54132 1417 aaPredicted RBP19.91■□□□□ 0.78
LINC01278-206ENST00000610088 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
LINC01278-206ENST00000610088 MYO5BQ9ULV0 1848 aa19.89■□□□□ 0.77
LINC01278-206ENST00000610088 PTPRUQ92729 1446 aa19.88■□□□□ 0.77
LINC01278-206ENST00000610088 ANKRD30AQ9BXX3 1397 aa19.86■□□□□ 0.77
LINC01278-206ENST00000610088 CHIC2Q9UKJ5 165 aa19.86■□□□□ 0.77
LINC01278-206ENST00000610088 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
LINC01278-206ENST00000610088 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
LINC01278-206ENST00000610088 HRCP23327 699 aa19.85■□□□□ 0.77
LINC01278-206ENST00000610088 YY1P25490 414 aa19.85■□□□□ 0.77
LINC01278-206ENST00000610088 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
LINC01278-206ENST00000610088 TRPM2O94759 1503 aa19.85■□□□□ 0.77
LINC01278-206ENST00000610088 TMEM131LA2VDJ0 1609 aa19.83■□□□□ 0.76
LINC01278-206ENST00000610088 BCL9LQ86UU0 1499 aa19.8■□□□□ 0.76
LINC01278-206ENST00000610088 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
LINC01278-206ENST00000610088 RPRD2Q5VT52 1461 aaKnown RBP19.77■□□□□ 0.76
LINC01278-206ENST00000610088 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
LINC01278-206ENST00000610088 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
LINC01278-206ENST00000610088 ADGRL3Q9HAR2 1447 aa19.76■□□□□ 0.75
LINC01278-206ENST00000610088 ADGRL2O95490 1459 aa19.74■□□□□ 0.75
LINC01278-206ENST00000610088 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
LINC01278-206ENST00000610088 BAG6P46379 1132 aa19.72■□□□□ 0.75
LINC01278-206ENST00000610088 XRN1Q8IZH2 1706 aaKnown RBP19.72■□□□□ 0.75
LINC01278-206ENST00000610088 RALGAPBQ86X10 1494 aa19.72■□□□□ 0.75
LINC01278-206ENST00000610088 UNC13BO14795 1591 aa19.71■□□□□ 0.75
LINC01278-206ENST00000610088 R3HDM1Q15032 1099 aaKnown RBP19.71■□□□□ 0.75
LINC01278-206ENST00000610088 SEPT12Q8IYM1 358 aa19.71■□□□□ 0.75
LINC01278-206ENST00000610088 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
LINC01278-206ENST00000610088 METP08581 1390 aa19.7■□□□□ 0.74
LINC01278-206ENST00000610088 MYOM2P54296 1465 aa19.69■□□□□ 0.74
LINC01278-206ENST00000610088 ANKRD50Q9ULJ7 1429 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms