RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
CTCFL-221ENST00000608903 NLRP1Q9C000 1473 aa16.49■□□□□ 0.23
CTCFL-221ENST00000608903 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
CTCFL-221ENST00000608903 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
CTCFL-221ENST00000608903 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
CTCFL-221ENST00000608903 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
CTCFL-221ENST00000608903 RALGAPBQ86X10 1494 aa16.47■□□□□ 0.23
CTCFL-221ENST00000608903 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
CTCFL-221ENST00000608903 KDM5AP29375 1690 aaKnown RBP16.46■□□□□ 0.22
CTCFL-221ENST00000608903 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
CTCFL-221ENST00000608903 RIMS2Q9UQ26 1411 aa16.45■□□□□ 0.22
CTCFL-221ENST00000608903 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-221ENST00000608903 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-221ENST00000608903 SETD1BQ9UPS6 1966 aaKnown RBP16.44■□□□□ 0.22
CTCFL-221ENST00000608903 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
CTCFL-221ENST00000608903 PIK3C2GO75747 1445 aa16.43■□□□□ 0.22
CTCFL-221ENST00000608903 TMEM2Q9UHN6 1383 aa16.42■□□□□ 0.22
CTCFL-221ENST00000608903 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-221ENST00000608903 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
CTCFL-221ENST00000608903 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
CTCFL-221ENST00000608903 LTKP29376 864 aa16.41■□□□□ 0.22
CTCFL-221ENST00000608903 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
CTCFL-221ENST00000608903 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
CTCFL-221ENST00000608903 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
CTCFL-221ENST00000608903 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.22
CTCFL-221ENST00000608903 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
CTCFL-221ENST00000608903 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.21
CTCFL-221ENST00000608903 ZNF142P52746 1687 aaPredicted RBP16.39■□□□□ 0.21
CTCFL-221ENST00000608903 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
CTCFL-221ENST00000608903 SLIT1O75093 1534 aa16.38■□□□□ 0.21
CTCFL-221ENST00000608903 THEMISQ8N1K5 641 aaPredicted RBP16.37■□□□□ 0.21
CTCFL-221ENST00000608903 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
CTCFL-221ENST00000608903 TMEM132EQ6IEE7 984 aa16.36■□□□□ 0.21
CTCFL-221ENST00000608903 USP47Q96K76 1375 aa16.36■□□□□ 0.21
CTCFL-221ENST00000608903 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
CTCFL-221ENST00000608903 ADGRB1O14514 1584 aa16.35■□□□□ 0.21
CTCFL-221ENST00000608903 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
CTCFL-221ENST00000608903 TXNDC2Q86VQ3 553 aa16.35■□□□□ 0.21
CTCFL-221ENST00000608903 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
CTCFL-221ENST00000608903 LAMC1P11047 1609 aa16.35■□□□□ 0.21
CTCFL-221ENST00000608903 ALKQ9UM73 1620 aa16.35■□□□□ 0.21
CTCFL-221ENST00000608903 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.21
CTCFL-221ENST00000608903 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
CTCFL-221ENST00000608903 IQGAP1P46940 1657 aa16.32■□□□□ 0.2
CTCFL-221ENST00000608903 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
CTCFL-221ENST00000608903 ADAMTS13Q76LX8 1427 aa16.31■□□□□ 0.2
CTCFL-221ENST00000608903 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
CTCFL-221ENST00000608903 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
CTCFL-221ENST00000608903 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
CTCFL-221ENST00000608903 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
CTCFL-221ENST00000608903 EID1Q9Y6B2 187 aa16.29■□□□□ 0.2
CTCFL-221ENST00000608903 METP08581 1390 aa16.28■□□□□ 0.2
CTCFL-221ENST00000608903 MED14O60244 1454 aa16.28■□□□□ 0.2
CTCFL-221ENST00000608903 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.19
CTCFL-221ENST00000608903 TESK2Q96S53 571 aa16.27■□□□□ 0.19
CTCFL-221ENST00000608903 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.19
CTCFL-221ENST00000608903 HSPA2P54652 639 aa16.26■□□□□ 0.19
CTCFL-221ENST00000608903 LMTK3Q96Q04 1460 aa16.26■□□□□ 0.19
CTCFL-221ENST00000608903 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
CTCFL-221ENST00000608903 ANKLE2Q86XL3 938 aa16.25■□□□□ 0.19
CTCFL-221ENST00000608903 DIEXFQ68CQ4 756 aaKnown RBP16.25■□□□□ 0.19
CTCFL-221ENST00000608903 BCANQ96GW7 911 aa16.25■□□□□ 0.19
CTCFL-221ENST00000608903 STK26Q9P289 416 aa16.25■□□□□ 0.19
CTCFL-221ENST00000608903 YTHDC2Q9H6S0 1430 aaKnown RBP16.24■□□□□ 0.19
CTCFL-221ENST00000608903 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
CTCFL-221ENST00000608903 PTPRUQ92729 1446 aa16.22■□□□□ 0.19
CTCFL-221ENST00000608903 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
CTCFL-221ENST00000608903 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.19
CTCFL-221ENST00000608903 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
CTCFL-221ENST00000608903 POLR1AO95602 1720 aaPredicted RBP16.2■□□□□ 0.18
CTCFL-221ENST00000608903 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
CTCFL-221ENST00000608903 NPHP4O75161 1426 aaPredicted RBP16.19■□□□□ 0.18
CTCFL-221ENST00000608903 ABCC11Q96J66 1382 aa16.19■□□□□ 0.18
CTCFL-221ENST00000608903 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
CTCFL-221ENST00000608903 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
CTCFL-221ENST00000608903 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
CTCFL-221ENST00000608903 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
CTCFL-221ENST00000608903 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
CTCFL-221ENST00000608903 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
CTCFL-221ENST00000608903 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
CTCFL-221ENST00000608903 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
CTCFL-221ENST00000608903 STRCQ7RTU9 1775 aa16.16■□□□□ 0.18
CTCFL-221ENST00000608903 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
CTCFL-221ENST00000608903 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
CTCFL-221ENST00000608903 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
CTCFL-221ENST00000608903 DLC1Q96QB1 1528 aa16.16■□□□□ 0.18
CTCFL-221ENST00000608903 TECPR2O15040 1411 aa16.15■□□□□ 0.18
CTCFL-221ENST00000608903 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
CTCFL-221ENST00000608903 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
CTCFL-221ENST00000608903 AMOTL2Q9Y2J4 779 aa16.15■□□□□ 0.18
CTCFL-221ENST00000608903 CPS1P31327 1500 aa16.13■□□□□ 0.17
CTCFL-221ENST00000608903 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
CTCFL-221ENST00000608903 SBNO2Q9Y2G9 1366 aa16.12■□□□□ 0.17
CTCFL-221ENST00000608903 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
CTCFL-221ENST00000608903 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
CTCFL-221ENST00000608903 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
CTCFL-221ENST00000608903 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
CTCFL-221ENST00000608903 KCNA6P17658 529 aa16.11■□□□□ 0.17
CTCFL-221ENST00000608903 TMF1P82094 1093 aa16.11■□□□□ 0.17
CTCFL-221ENST00000608903 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms