RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ARID3CA6NKF2 412 aa9.46□□□□□ -0.9
LINC00397-202ENST00000606785 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
LINC00397-202ENST00000606785 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
LINC00397-202ENST00000606785 TSR1Q2NL82 804 aaKnown RBP9.46□□□□□ -0.9
LINC00397-202ENST00000606785 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
LINC00397-202ENST00000606785 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
LINC00397-202ENST00000606785 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
LINC00397-202ENST00000606785 OATP04181 439 aa9.43□□□□□ -0.9
LINC00397-202ENST00000606785 MCM6Q14566 821 aa9.43□□□□□ -0.9
LINC00397-202ENST00000606785 Q6ZNB5 142 aa9.43□□□□□ -0.9
LINC00397-202ENST00000606785 CLUAP1Q96AJ1 413 aa9.43□□□□□ -0.9
LINC00397-202ENST00000606785 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
LINC00397-202ENST00000606785 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
LINC00397-202ENST00000606785 CERKQ8TCT0 537 aa9.42□□□□□ -0.9
LINC00397-202ENST00000606785 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
LINC00397-202ENST00000606785 TRAK2O60296 914 aa9.41□□□□□ -0.9
LINC00397-202ENST00000606785 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
LINC00397-202ENST00000606785 FAM161AQ3B820 660 aa9.39□□□□□ -0.91
LINC00397-202ENST00000606785 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
LINC00397-202ENST00000606785 ADGRG1Q9Y653 693 aa9.39□□□□□ -0.91
LINC00397-202ENST00000606785 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
LINC00397-202ENST00000606785 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
LINC00397-202ENST00000606785 PROCA1Q8NCQ7 364 aaPredicted RBP9.38□□□□□ -0.91
LINC00397-202ENST00000606785 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
LINC00397-202ENST00000606785 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
LINC00397-202ENST00000606785 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
LINC00397-202ENST00000606785 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
LINC00397-202ENST00000606785 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
LINC00397-202ENST00000606785 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
LINC00397-202ENST00000606785 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
LINC00397-202ENST00000606785 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
LINC00397-202ENST00000606785 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
LINC00397-202ENST00000606785 RABGEF1Q9UJ41 708 aa9.36□□□□□ -0.91
LINC00397-202ENST00000606785 ATP1B4Q9UN42 357 aaPredicted RBP9.36□□□□□ -0.91
LINC00397-202ENST00000606785 LAPTM4AQ15012 233 aa9.35□□□□□ -0.91
LINC00397-202ENST00000606785 CCDC82Q8N4S0 544 aa9.35□□□□□ -0.91
LINC00397-202ENST00000606785 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC00397-202ENST00000606785 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
LINC00397-202ENST00000606785 TRIM26Q12899 539 aaPredicted RBP9.34□□□□□ -0.91
LINC00397-202ENST00000606785 PROSER2Q86WR7 435 aaPredicted RBP9.34□□□□□ -0.91
LINC00397-202ENST00000606785 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
LINC00397-202ENST00000606785 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
LINC00397-202ENST00000606785 RAD21O60216 631 aa9.32□□□□□ -0.92
LINC00397-202ENST00000606785 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
LINC00397-202ENST00000606785 SOWAHBA6NEL2 793 aa9.31□□□□□ -0.92
LINC00397-202ENST00000606785 SPDYE5A6NIY4 337 aa9.31□□□□□ -0.92
LINC00397-202ENST00000606785 PRSS12P56730 875 aa9.31□□□□□ -0.92
LINC00397-202ENST00000606785 RBM46Q8TBY0 533 aaKnown RBP9.31□□□□□ -0.92
LINC00397-202ENST00000606785 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
LINC00397-202ENST00000606785 BCAMP50895 628 aa9.3□□□□□ -0.92
LINC00397-202ENST00000606785 KCNC4Q03721 635 aa9.3□□□□□ -0.92
LINC00397-202ENST00000606785 FNBP4Q8N3X1 1017 aaPredicted RBP9.3□□□□□ -0.92
LINC00397-202ENST00000606785 BANK1Q8NDB2 785 aa9.3□□□□□ -0.92
LINC00397-202ENST00000606785 POM121Q96HA1 1249 aa9.3□□□□□ -0.92
LINC00397-202ENST00000606785 CDCA7LQ96GN5 454 aa9.29□□□□□ -0.92
LINC00397-202ENST00000606785 RFC5P40937 340 aa9.28□□□□□ -0.92
LINC00397-202ENST00000606785 PROX2Q3B8N5 592 aa9.28□□□□□ -0.92
LINC00397-202ENST00000606785 ZNF777Q9ULD5 760 aaPredicted RBP9.28□□□□□ -0.92
LINC00397-202ENST00000606785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.27□□□□□ -0.93
LINC00397-202ENST00000606785 HRCP23327 699 aa9.27□□□□□ -0.93
LINC00397-202ENST00000606785 ZFRQ96KR1 1074 aaKnown RBP9.26□□□□□ -0.93
LINC00397-202ENST00000606785 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
LINC00397-202ENST00000606785 LCE2BO14633 110 aa9.25□□□□□ -0.93
LINC00397-202ENST00000606785 PDIA4P13667 645 aaKnown RBP9.25□□□□□ -0.93
LINC00397-202ENST00000606785 TMEM259Q4ZIN3 620 aa9.25□□□□□ -0.93
LINC00397-202ENST00000606785 PPP2R2DQ66LE6 453 aa9.25□□□□□ -0.93
LINC00397-202ENST00000606785 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
LINC00397-202ENST00000606785 LIMD1Q9UGP4 676 aa9.25□□□□□ -0.93
LINC00397-202ENST00000606785 RCCD1A6NED2 376 aa9.24□□□□□ -0.93
LINC00397-202ENST00000606785 COL9A1P20849 921 aa9.24□□□□□ -0.93
LINC00397-202ENST00000606785 SPIRE2Q8WWL2 714 aa9.24□□□□□ -0.93
LINC00397-202ENST00000606785 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
LINC00397-202ENST00000606785 WBP1LQ9NX94 342 aa9.24□□□□□ -0.93
LINC00397-202ENST00000606785 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
LINC00397-202ENST00000606785 TUSC1Q2TAM9 212 aa9.23□□□□□ -0.93
LINC00397-202ENST00000606785 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
LINC00397-202ENST00000606785 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
LINC00397-202ENST00000606785 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
LINC00397-202ENST00000606785 CD46P15529 392 aa9.22□□□□□ -0.93
LINC00397-202ENST00000606785 SULF1Q8IWU6 871 aa9.22□□□□□ -0.93
LINC00397-202ENST00000606785 EYA1Q99502 592 aa9.22□□□□□ -0.93
LINC00397-202ENST00000606785 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
LINC00397-202ENST00000606785 SPTLC1O15269 473 aa9.21□□□□□ -0.94
LINC00397-202ENST00000606785 GFRA3O60609 400 aa9.21□□□□□ -0.94
LINC00397-202ENST00000606785 KIAA1468Q9P260 1216 aa9.21□□□□□ -0.94
LINC00397-202ENST00000606785 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
LINC00397-202ENST00000606785 NUTM1Q86Y26 1132 aa9.19□□□□□ -0.94
LINC00397-202ENST00000606785 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
LINC00397-202ENST00000606785 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
LINC00397-202ENST00000606785 SOCS7O14512 581 aa9.18□□□□□ -0.94
LINC00397-202ENST00000606785 DNAJB2P25686 324 aa9.18□□□□□ -0.94
LINC00397-202ENST00000606785 GJA5P36382 358 aa9.18□□□□□ -0.94
LINC00397-202ENST00000606785 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
LINC00397-202ENST00000606785 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
LINC00397-202ENST00000606785 ZBTB7CA1YPR0 619 aa9.17□□□□□ -0.94
LINC00397-202ENST00000606785 DDX11L8A8MPP1 907 aa9.17□□□□□ -0.94
LINC00397-202ENST00000606785 NRG2O14511 850 aaPredicted RBP9.17□□□□□ -0.94
LINC00397-202ENST00000606785 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
LINC00397-202ENST00000606785 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
LINC00397-202ENST00000606785 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms