RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 PIP4K2BP78356 416 aa34.59■■■■□ 3.13
SLC27A1-209ENST00000600297 SLC4A1APQ9BWU0 796 aaKnown RBP34.59■■■■□ 3.13
SLC27A1-209ENST00000600297 XIRP1Q702N8 1843 aaKnown RBP34.57■■■■□ 3.12
SLC27A1-209ENST00000600297 DISP3Q9P2K9 1392 aa34.55■■■■□ 3.12
SLC27A1-209ENST00000600297 CHGAP10645 457 aaKnown RBP34.51■■■■□ 3.12
SLC27A1-209ENST00000600297 BCANQ96GW7 911 aa34.51■■■■□ 3.12
SLC27A1-209ENST00000600297 ALKQ9UM73 1620 aa34.51■■■■□ 3.11
SLC27A1-209ENST00000600297 TRPM2O94759 1503 aa34.5■■■■□ 3.11
SLC27A1-209ENST00000600297 RAB3GAP2Q9H2M9 1393 aa34.49■■■■□ 3.11
SLC27A1-209ENST00000600297 RIMS2Q9UQ26 1411 aa34.49■■■■□ 3.11
SLC27A1-209ENST00000600297 HDGFP51858 240 aaKnown RBP34.49■■■■□ 3.11
SLC27A1-209ENST00000600297 ZFYVE9O95405 1425 aa34.48■■■■□ 3.11
SLC27A1-209ENST00000600297 PPP1R15AO75807 674 aaPredicted RBP34.47■■■■□ 3.11
SLC27A1-209ENST00000600297 SLC26A8Q96RN1 970 aa34.47■■■■□ 3.11
SLC27A1-209ENST00000600297 MPHOSPH9Q99550 1183 aa34.46■■■■□ 3.11
SLC27A1-209ENST00000600297 HRCP23327 699 aa34.45■■■■□ 3.11
SLC27A1-209ENST00000600297 NWD1Q149M9 1564 aa34.42■■■■□ 3.1
SLC27A1-209ENST00000600297 PLEKHG1Q9ULL1 1385 aa34.42■■■■□ 3.1
SLC27A1-209ENST00000600297 HSPA1LP34931 641 aa34.42■■■■□ 3.1
SLC27A1-209ENST00000600297 SENP3Q9H4L4 574 aaPredicted RBP34.42■■■■□ 3.1
SLC27A1-209ENST00000600297 CLTCL1P53675 1640 aa34.41■■■■□ 3.1
SLC27A1-209ENST00000600297 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.41■■■■□ 3.1
SLC27A1-209ENST00000600297 CHD2O14647 1828 aaKnown RBP34.41■■■■□ 3.1
SLC27A1-209ENST00000600297 KIF1BO60333 1816 aa34.4■■■■□ 3.1
SLC27A1-209ENST00000600297 KCNA6P17658 529 aa34.4■■■■□ 3.1
SLC27A1-209ENST00000600297 NKTRP30414 1462 aaKnown RBP34.37■■■■□ 3.09
SLC27A1-209ENST00000600297 TMEM94Q12767 1356 aa34.34■■■■□ 3.09
SLC27A1-209ENST00000600297 PROSER2Q86WR7 435 aaPredicted RBP34.33■■■■□ 3.09
SLC27A1-209ENST00000600297 FOXD1Q16676 465 aa34.31■■■■□ 3.08
SLC27A1-209ENST00000600297 NUTM2DQ5VT03 806 aaPredicted RBP34.31■■■■□ 3.08
SLC27A1-209ENST00000600297 DIP2AQ14689 1571 aa34.31■■■■□ 3.08
SLC27A1-209ENST00000600297 ZNF326Q5BKZ1 582 aaKnown RBP34.28■■■■□ 3.08
SLC27A1-209ENST00000600297 CCDC144AA2RUR9 1427 aa34.26■■■■□ 3.07
SLC27A1-209ENST00000600297 MED1Q15648 1581 aaPredicted RBP34.24■■■■□ 3.07
SLC27A1-209ENST00000600297 TBX22Q9Y458 520 aa34.24■■■■□ 3.07
SLC27A1-209ENST00000600297 RBM33Q96EV2 1170 aaKnown RBP34.23■■■■□ 3.07
SLC27A1-209ENST00000600297 ADAMTS13Q76LX8 1427 aa34.22■■■■□ 3.07
SLC27A1-209ENST00000600297 ILDR2Q71H61 639 aa34.21■■■■□ 3.07
SLC27A1-209ENST00000600297 NEXMIFQ5QGS0 1516 aa34.2■■■■□ 3.06
SLC27A1-209ENST00000600297 RPGRIP1LQ68CZ1 1315 aa34.19■■■■□ 3.06
SLC27A1-209ENST00000600297 MSH6P52701 1360 aa34.19■■■■□ 3.06
SLC27A1-209ENST00000600297 ROBO1Q9Y6N7 1651 aa34.18■■■■□ 3.06
SLC27A1-209ENST00000600297 NRXN3Q9Y4C0 1643 aa34.15■■■■□ 3.06
SLC27A1-209ENST00000600297 PIK3R4Q99570 1358 aa34.15■■■■□ 3.06
SLC27A1-209ENST00000600297 SETBP1Q9Y6X0 1596 aa34.13■■■■□ 3.05
SLC27A1-209ENST00000600297 FAM135BQ49AJ0 1406 aa34.13■■■■□ 3.05
SLC27A1-209ENST00000600297 VGFO15240 615 aaPredicted RBP34.12■■■■□ 3.05
SLC27A1-209ENST00000600297 TRIM26Q12899 539 aaPredicted RBP34.1■■■■□ 3.05
SLC27A1-209ENST00000600297 SPATA31E1Q6ZUB1 1445 aa34.1■■■■□ 3.05
SLC27A1-209ENST00000600297 PPLO60437 1756 aa34.09■■■■□ 3.05
SLC27A1-209ENST00000600297 ANKRD30BQ9BXX2 1392 aa34.09■■■■□ 3.05
SLC27A1-209ENST00000600297 C14orf37Q86TY3 774 aa34.08■■■■□ 3.05
SLC27A1-209ENST00000600297 NCOA3Q9Y6Q9 1424 aa34.06■■■■□ 3.04
SLC27A1-209ENST00000600297 XRN1Q8IZH2 1706 aaKnown RBP34.06■■■■□ 3.04
SLC27A1-209ENST00000600297 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.06■■■■□ 3.04
SLC27A1-209ENST00000600297 PTPRUQ92729 1446 aa34.03■■■■□ 3.04
SLC27A1-209ENST00000600297 RGL3Q3MIN7 710 aa34.02■■■■□ 3.04
SLC27A1-209ENST00000600297 AMOTL2Q9Y2J4 779 aa34.02■■■■□ 3.04
SLC27A1-209ENST00000600297 PHLPP1O60346 1717 aa34.01■■■■□ 3.04
SLC27A1-209ENST00000600297 PHF23Q9BUL5 403 aaPredicted RBP34■■■■□ 3.03
SLC27A1-209ENST00000600297 IFT172Q9UG01 1749 aa34■■■■□ 3.03
SLC27A1-209ENST00000600297 SLAIN2Q9P270 581 aa33.99■■■■□ 3.03
SLC27A1-209ENST00000600297 SOCS7O14512 581 aa33.97■■■■□ 3.03
SLC27A1-209ENST00000600297 METP08581 1390 aa33.93■■■■□ 3.02
SLC27A1-209ENST00000600297 SETD1AO15047 1707 aaKnown RBP33.93■■■■□ 3.02
SLC27A1-209ENST00000600297 ATF3P18847 181 aa33.92■■■■□ 3.02
SLC27A1-209ENST00000600297 C19orf44Q9H6X5 657 aa33.92■■■■□ 3.02
SLC27A1-209ENST00000600297 CADPS2Q86UW7 1296 aa33.91■■■■□ 3.02
SLC27A1-209ENST00000600297 ADGRF5Q8IZF2 1346 aa33.86■■■■□ 3.01
SLC27A1-209ENST00000600297 DCCP43146 1447 aa33.85■■■■□ 3.01
SLC27A1-209ENST00000600297 NALCNQ8IZF0 1738 aa33.84■■■■□ 3.01
SLC27A1-209ENST00000600297 MYOM2P54296 1465 aa33.84■■■■□ 3.01
SLC27A1-209ENST00000600297 COL16A1Q07092 1604 aaPredicted RBP33.83■■■■□ 3.01
SLC27A1-209ENST00000600297 STAC3Q96MF2 364 aa33.82■■■■□ 3
SLC27A1-209ENST00000600297 PIK3C2GO75747 1445 aa33.81■■■■□ 3
SLC27A1-209ENST00000600297 AHDC1Q5TGY3 1603 aaPredicted RBP33.79■■■■□ 3
SLC27A1-209ENST00000600297 NRXN1Q9ULB1 1477 aa33.79■■■■□ 3
SLC27A1-209ENST00000600297 ADGRL3Q9HAR2 1447 aa33.78■■■■□ 3
SLC27A1-209ENST00000600297 JCADQ9P266 1359 aa33.75■■■□□ 2.99
SLC27A1-209ENST00000600297 PRAG1Q86YV5 1406 aa33.75■■■□□ 2.99
SLC27A1-209ENST00000600297 PTCH1Q13635 1447 aa33.74■■■□□ 2.99
SLC27A1-209ENST00000600297 LAMC1P11047 1609 aa33.73■■■□□ 2.99
SLC27A1-209ENST00000600297 MST1RQ04912 1400 aa33.71■■■□□ 2.99
SLC27A1-209ENST00000600297 DCAF11Q8TEB1 546 aa33.71■■■□□ 2.99
SLC27A1-209ENST00000600297 C14orf93Q9H972 538 aaKnown RBP33.71■■■□□ 2.99
SLC27A1-209ENST00000600297 DHX57Q6P158 1386 aaKnown RBP33.71■■■□□ 2.99
SLC27A1-209ENST00000600297 ASXL1Q8IXJ9 1541 aa33.7■■■□□ 2.99
SLC27A1-209ENST00000600297 SHPRHQ149N8 1683 aa33.7■■■□□ 2.99
SLC27A1-209ENST00000600297 NHSL1Q5SYE7 1610 aa33.69■■■□□ 2.98
SLC27A1-209ENST00000600297 BRINP3Q76B58 766 aa33.69■■■□□ 2.98
SLC27A1-209ENST00000600297 ROBO2Q9HCK4 1378 aa33.66■■■□□ 2.98
SLC27A1-209ENST00000600297 KDM2AQ9Y2K7 1162 aa33.64■■■□□ 2.98
SLC27A1-209ENST00000600297 LRPPRCP42704 1394 aaKnown RBP33.63■■■□□ 2.97
SLC27A1-209ENST00000600297 TECPR2O15040 1411 aa33.62■■■□□ 2.97
SLC27A1-209ENST00000600297 RGS17Q9UGC6 210 aaPredicted RBP33.62■■■□□ 2.97
SLC27A1-209ENST00000600297 ABCC11Q96J66 1382 aa33.61■■■□□ 2.97
SLC27A1-209ENST00000600297 CFAP70Q5T0N1 1121 aa33.61■■■□□ 2.97
SLC27A1-209ENST00000600297 KNDC1Q76NI1 1749 aa33.61■■■□□ 2.97
SLC27A1-209ENST00000600297 TMEM132EQ6IEE7 984 aa33.6■■■□□ 2.97
SLC27A1-209ENST00000600297 YTHDC2Q9H6S0 1430 aaKnown RBP33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms