RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 IDI1Q13907 227 aa23.56■■□□□ 1.36
U2AF1L4-220ENST00000600296 STAC3Q96MF2 364 aa23.55■■□□□ 1.36
U2AF1L4-220ENST00000600296 LAMC1P11047 1609 aa23.55■■□□□ 1.36
U2AF1L4-220ENST00000600296 A2ML1A8K2U0 1454 aa23.54■■□□□ 1.36
U2AF1L4-220ENST00000600296 NBPF8Q3BBV2 869 aa23.53■■□□□ 1.36
U2AF1L4-220ENST00000600296 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
U2AF1L4-220ENST00000600296 DCAF11Q8TEB1 546 aa23.51■■□□□ 1.35
U2AF1L4-220ENST00000600296 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
U2AF1L4-220ENST00000600296 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
U2AF1L4-220ENST00000600296 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
U2AF1L4-220ENST00000600296 PIK3C2GO75747 1445 aa23.45■■□□□ 1.34
U2AF1L4-220ENST00000600296 GPRASP1Q5JY77 1395 aa23.44■■□□□ 1.34
U2AF1L4-220ENST00000600296 IQGAP1P46940 1657 aa23.42■■□□□ 1.34
U2AF1L4-220ENST00000600296 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
U2AF1L4-220ENST00000600296 KDM2AQ9Y2K7 1162 aa23.42■■□□□ 1.34
U2AF1L4-220ENST00000600296 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
U2AF1L4-220ENST00000600296 SLIT1O75093 1534 aa23.42■■□□□ 1.34
U2AF1L4-220ENST00000600296 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
U2AF1L4-220ENST00000600296 ARHGAP23Q9P227 1491 aa23.41■■□□□ 1.34
U2AF1L4-220ENST00000600296 ZNF326Q5BKZ1 582 aaKnown RBP23.4■■□□□ 1.34
U2AF1L4-220ENST00000600296 RIMS2Q9UQ26 1411 aa23.39■■□□□ 1.33
U2AF1L4-220ENST00000600296 NRXN3Q9Y4C0 1643 aa23.38■■□□□ 1.33
U2AF1L4-220ENST00000600296 ADGRF5Q8IZF2 1346 aa23.37■■□□□ 1.33
U2AF1L4-220ENST00000600296 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
U2AF1L4-220ENST00000600296 ILDR1Q86SU0 546 aaPredicted RBP23.36■■□□□ 1.33
U2AF1L4-220ENST00000600296 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
U2AF1L4-220ENST00000600296 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
U2AF1L4-220ENST00000600296 ROCK2O75116 1388 aaKnown RBP23.33■■□□□ 1.33
U2AF1L4-220ENST00000600296 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
U2AF1L4-220ENST00000600296 STAG3Q9UJ98 1225 aa23.33■■□□□ 1.33
U2AF1L4-220ENST00000600296 ASXL1Q8IXJ9 1541 aa23.32■■□□□ 1.32
U2AF1L4-220ENST00000600296 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
U2AF1L4-220ENST00000600296 USP47Q96K76 1375 aa23.28■■□□□ 1.32
U2AF1L4-220ENST00000600296 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
U2AF1L4-220ENST00000600296 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.28■■□□□ 1.32
U2AF1L4-220ENST00000600296 STRCQ7RTU9 1775 aa23.27■■□□□ 1.32
U2AF1L4-220ENST00000600296 SCAF11Q99590 1463 aaKnown RBP23.26■■□□□ 1.31
U2AF1L4-220ENST00000600296 ARHGEF28Q8N1W1 1705 aaKnown RBP23.26■■□□□ 1.31
U2AF1L4-220ENST00000600296 NBPF1Q3BBV0 1214 aa23.26■■□□□ 1.31
U2AF1L4-220ENST00000600296 C14orf93Q9H972 538 aaKnown RBP23.26■■□□□ 1.31
U2AF1L4-220ENST00000600296 EIF4G2P78344 907 aaKnown RBP eCLIP23.25■■□□□ 1.31
U2AF1L4-220ENST00000600296 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
U2AF1L4-220ENST00000600296 DIP2AQ14689 1571 aa23.24■■□□□ 1.31
U2AF1L4-220ENST00000600296 KNDC1Q76NI1 1749 aa23.24■■□□□ 1.31
U2AF1L4-220ENST00000600296 PLEKHG1Q9ULL1 1385 aa23.24■■□□□ 1.31
U2AF1L4-220ENST00000600296 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
U2AF1L4-220ENST00000600296 CFAP70Q5T0N1 1121 aa23.23■■□□□ 1.31
U2AF1L4-220ENST00000600296 THEMISQ8N1K5 641 aaPredicted RBP23.23■■□□□ 1.31
U2AF1L4-220ENST00000600296 NCKAP5LQ9HCH0 1330 aa23.23■■□□□ 1.31
U2AF1L4-220ENST00000600296 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
U2AF1L4-220ENST00000600296 HDGFP51858 240 aaKnown RBP23.21■■□□□ 1.31
U2AF1L4-220ENST00000600296 NUTM2DQ5VT03 806 aaPredicted RBP23.21■■□□□ 1.31
U2AF1L4-220ENST00000600296 MED14O60244 1454 aa23.21■■□□□ 1.31
U2AF1L4-220ENST00000600296 ADAMTS13Q76LX8 1427 aa23.19■■□□□ 1.3
U2AF1L4-220ENST00000600296 LTKP29376 864 aa23.17■■□□□ 1.3
U2AF1L4-220ENST00000600296 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
U2AF1L4-220ENST00000600296 DLC1Q96QB1 1528 aa23.15■■□□□ 1.3
U2AF1L4-220ENST00000600296 CERKQ8TCT0 537 aa23.14■■□□□ 1.29
U2AF1L4-220ENST00000600296 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
U2AF1L4-220ENST00000600296 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
U2AF1L4-220ENST00000600296 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
U2AF1L4-220ENST00000600296 FBXO41Q8TF61 875 aa23.12■■□□□ 1.29
U2AF1L4-220ENST00000600296 YTHDC2Q9H6S0 1430 aaKnown RBP23.12■■□□□ 1.29
U2AF1L4-220ENST00000600296 CPS1P31327 1500 aa23.12■■□□□ 1.29
U2AF1L4-220ENST00000600296 TECPR2O15040 1411 aa23.1■■□□□ 1.29
U2AF1L4-220ENST00000600296 SBNO2Q9Y2G9 1366 aa23.1■■□□□ 1.29
U2AF1L4-220ENST00000600296 XRN1Q8IZH2 1706 aaKnown RBP23.1■■□□□ 1.29
U2AF1L4-220ENST00000600296 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
U2AF1L4-220ENST00000600296 ST20-MTHFSA0A0A6YYL1 179 aa23.08■■□□□ 1.29
U2AF1L4-220ENST00000600296 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
U2AF1L4-220ENST00000600296 CHD2O14647 1828 aaKnown RBP23.07■■□□□ 1.28
U2AF1L4-220ENST00000600296 METP08581 1390 aa23.06■■□□□ 1.28
U2AF1L4-220ENST00000600296 TMEM132EQ6IEE7 984 aa23.06■■□□□ 1.28
U2AF1L4-220ENST00000600296 TESK2Q96S53 571 aa23.06■■□□□ 1.28
U2AF1L4-220ENST00000600296 ABCC11Q96J66 1382 aa23.04■■□□□ 1.28
U2AF1L4-220ENST00000600296 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
U2AF1L4-220ENST00000600296 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
U2AF1L4-220ENST00000600296 NPHP4O75161 1426 aaPredicted RBP23.03■■□□□ 1.28
U2AF1L4-220ENST00000600296 PIK3R4Q99570 1358 aa23.02■■□□□ 1.28
U2AF1L4-220ENST00000600296 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
U2AF1L4-220ENST00000600296 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.28
U2AF1L4-220ENST00000600296 ZNF335Q9H4Z2 1342 aaPredicted RBP23.01■■□□□ 1.27
U2AF1L4-220ENST00000600296 NWD1Q149M9 1564 aa23.01■■□□□ 1.27
U2AF1L4-220ENST00000600296 PTPRUQ92729 1446 aa23■■□□□ 1.27
U2AF1L4-220ENST00000600296 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
U2AF1L4-220ENST00000600296 CENPJQ9HC77 1338 aaPredicted RBP23■■□□□ 1.27
U2AF1L4-220ENST00000600296 FAM135BQ49AJ0 1406 aa22.99■■□□□ 1.27
U2AF1L4-220ENST00000600296 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
U2AF1L4-220ENST00000600296 MYOM1P52179 1685 aa22.99■■□□□ 1.27
U2AF1L4-220ENST00000600296 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
U2AF1L4-220ENST00000600296 LTBP4Q8N2S1 1624 aa22.98■■□□□ 1.27
U2AF1L4-220ENST00000600296 TRAK1Q9UPV9 953 aa22.98■■□□□ 1.27
U2AF1L4-220ENST00000600296 DISP3Q9P2K9 1392 aa22.98■■□□□ 1.27
U2AF1L4-220ENST00000600296 TULP4Q9NRJ4 1543 aa22.97■■□□□ 1.27
U2AF1L4-220ENST00000600296 ADGRB2O60241 1585 aa22.96■■□□□ 1.27
U2AF1L4-220ENST00000600296 SLC24A1O60721 1099 aa22.95■■□□□ 1.26
U2AF1L4-220ENST00000600296 SIRT1Q96EB6 747 aa22.95■■□□□ 1.26
U2AF1L4-220ENST00000600296 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
U2AF1L4-220ENST00000600296 SLC26A8Q96RN1 970 aa22.93■■□□□ 1.26
U2AF1L4-220ENST00000600296 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms