RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 TNRQ92752 1358 aa33■■■□□ 2.87
SYMPK-212ENST00000598896 RPGRIP1LQ68CZ1 1315 aa33■■■□□ 2.87
SYMPK-212ENST00000598896 CARD11Q9BXL7 1154 aa32.99■■■□□ 2.87
SYMPK-212ENST00000598896 GPRASP1Q5JY77 1395 aa32.98■■■□□ 2.87
SYMPK-212ENST00000598896 RIMS1Q86UR5 1692 aaKnown RBP32.98■■■□□ 2.87
SYMPK-212ENST00000598896 USP47Q96K76 1375 aa32.98■■■□□ 2.87
SYMPK-212ENST00000598896 LAMC1P11047 1609 aa32.96■■■□□ 2.87
SYMPK-212ENST00000598896 A2ML1A8K2U0 1454 aa32.95■■■□□ 2.87
SYMPK-212ENST00000598896 KIAA1210Q9ULL0 1709 aa32.94■■■□□ 2.86
SYMPK-212ENST00000598896 PIK3C2GO75747 1445 aa32.92■■■□□ 2.86
SYMPK-212ENST00000598896 DIEXFQ68CQ4 756 aaKnown RBP32.91■■■□□ 2.86
SYMPK-212ENST00000598896 NUTM2DQ5VT03 806 aaPredicted RBP32.91■■■□□ 2.86
SYMPK-212ENST00000598896 STAG3Q9UJ98 1225 aa32.91■■■□□ 2.86
SYMPK-212ENST00000598896 PLPPR3Q6T4P5 718 aa32.89■■■□□ 2.86
SYMPK-212ENST00000598896 UBR1Q8IWV7 1749 aa32.87■■■□□ 2.85
SYMPK-212ENST00000598896 KDM5AP29375 1690 aaKnown RBP32.87■■■□□ 2.85
SYMPK-212ENST00000598896 ZFYVE9O95405 1425 aa32.86■■■□□ 2.85
SYMPK-212ENST00000598896 NLRP1Q9C000 1473 aa32.86■■■□□ 2.85
SYMPK-212ENST00000598896 CFAP70Q5T0N1 1121 aa32.86■■■□□ 2.85
SYMPK-212ENST00000598896 VGFO15240 615 aaPredicted RBP32.84■■■□□ 2.85
SYMPK-212ENST00000598896 IQGAP1P46940 1657 aa32.82■■■□□ 2.84
SYMPK-212ENST00000598896 MYO3AQ8NEV4 1616 aa32.8■■■□□ 2.84
SYMPK-212ENST00000598896 RIMS2Q9UQ26 1411 aa32.79■■■□□ 2.84
SYMPK-212ENST00000598896 ST20-MTHFSA0A0A6YYL1 179 aa32.78■■■□□ 2.84
SYMPK-212ENST00000598896 C11orf95C9JLR9 678 aaPredicted RBP32.78■■■□□ 2.84
SYMPK-212ENST00000598896 SETBP1Q9Y6X0 1596 aa32.77■■■□□ 2.84
SYMPK-212ENST00000598896 C14orf93Q9H972 538 aaKnown RBP32.77■■■□□ 2.84
SYMPK-212ENST00000598896 WASHC2AQ641Q2 1341 aa32.76■■■□□ 2.84
SYMPK-212ENST00000598896 POLR1AO95602 1720 aaPredicted RBP32.76■■■□□ 2.83
SYMPK-212ENST00000598896 ADGRB1O14514 1584 aa32.75■■■□□ 2.83
SYMPK-212ENST00000598896 SCAF11Q99590 1463 aaKnown RBP32.75■■■□□ 2.83
SYMPK-212ENST00000598896 TMEM2Q9UHN6 1383 aa32.71■■■□□ 2.83
SYMPK-212ENST00000598896 SENP3Q9H4L4 574 aaPredicted RBP32.7■■■□□ 2.83
SYMPK-212ENST00000598896 DDX10Q13206 875 aaKnown RBP32.69■■■□□ 2.82
SYMPK-212ENST00000598896 CCDC7Q96M83 1385 aa32.69■■■□□ 2.82
SYMPK-212ENST00000598896 PTPRMP28827 1452 aa32.68■■■□□ 2.82
SYMPK-212ENST00000598896 CEP170BQ9Y4F5 1589 aaPredicted RBP32.67■■■□□ 2.82
SYMPK-212ENST00000598896 KIF7Q2M1P5 1343 aa32.66■■■□□ 2.82
SYMPK-212ENST00000598896 ASXL1Q8IXJ9 1541 aa32.66■■■□□ 2.82
SYMPK-212ENST00000598896 TMEM132EQ6IEE7 984 aa32.65■■■□□ 2.82
SYMPK-212ENST00000598896 ALKQ9UM73 1620 aa32.65■■■□□ 2.82
SYMPK-212ENST00000598896 NRXN3Q9Y4C0 1643 aa32.64■■■□□ 2.82
SYMPK-212ENST00000598896 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.63■■■□□ 2.81
SYMPK-212ENST00000598896 TESK2Q96S53 571 aa32.63■■■□□ 2.81
SYMPK-212ENST00000598896 SLIT1O75093 1534 aa32.62■■■□□ 2.81
SYMPK-212ENST00000598896 ARHGAP23Q9P227 1491 aa32.61■■■□□ 2.81
SYMPK-212ENST00000598896 ZNF142P52746 1687 aaPredicted RBP32.61■■■□□ 2.81
SYMPK-212ENST00000598896 SETD1AO15047 1707 aaKnown RBP32.61■■■□□ 2.81
SYMPK-212ENST00000598896 EIF3AQ14152 1382 aaKnown RBP32.59■■■□□ 2.81
SYMPK-212ENST00000598896 SETD1BQ9UPS6 1966 aaKnown RBP32.58■■■□□ 2.81
SYMPK-212ENST00000598896 HDGFP51858 240 aaKnown RBP32.57■■■□□ 2.8
SYMPK-212ENST00000598896 LTKP29376 864 aa32.56■■■□□ 2.8
SYMPK-212ENST00000598896 THEMISQ8N1K5 641 aaPredicted RBP32.54■■■□□ 2.8
SYMPK-212ENST00000598896 TRAK1Q9UPV9 953 aa32.54■■■□□ 2.8
SYMPK-212ENST00000598896 DISP3Q9P2K9 1392 aa32.53■■■□□ 2.8
SYMPK-212ENST00000598896 ARHGEF28Q8N1W1 1705 aaKnown RBP32.53■■■□□ 2.8
SYMPK-212ENST00000598896 TXNDC2Q86VQ3 553 aa32.5■■■□□ 2.79
SYMPK-212ENST00000598896 PLEKHG1Q9ULL1 1385 aa32.49■■■□□ 2.79
SYMPK-212ENST00000598896 MIER1Q8N108 512 aa32.48■■■□□ 2.79
SYMPK-212ENST00000598896 YTHDC2Q9H6S0 1430 aaKnown RBP32.48■■■□□ 2.79
SYMPK-212ENST00000598896 POLR3GLQ9BT43 218 aa32.48■■■□□ 2.79
SYMPK-212ENST00000598896 EID1Q9Y6B2 187 aa32.47■■■□□ 2.79
SYMPK-212ENST00000598896 QRICH2Q9H0J4 1663 aa32.46■■■□□ 2.79
SYMPK-212ENST00000598896 ADAMTS13Q76LX8 1427 aa32.46■■■□□ 2.79
SYMPK-212ENST00000598896 TMF1P82094 1093 aa32.45■■■□□ 2.79
SYMPK-212ENST00000598896 CENPJQ9HC77 1338 aaPredicted RBP32.45■■■□□ 2.79
SYMPK-212ENST00000598896 METP08581 1390 aa32.44■■■□□ 2.78
SYMPK-212ENST00000598896 STK26Q9P289 416 aa32.44■■■□□ 2.78
SYMPK-212ENST00000598896 KDM4FA0A1W2PPD8 638 aa32.43■■■□□ 2.78
SYMPK-212ENST00000598896 SBNO2Q9Y2G9 1366 aa32.42■■■□□ 2.78
SYMPK-212ENST00000598896 BCANQ96GW7 911 aa32.41■■■□□ 2.78
SYMPK-212ENST00000598896 MED14O60244 1454 aa32.39■■■□□ 2.78
SYMPK-212ENST00000598896 LRPPRCP42704 1394 aaKnown RBP32.37■■■□□ 2.77
SYMPK-212ENST00000598896 DLC1Q96QB1 1528 aa32.34■■■□□ 2.77
SYMPK-212ENST00000598896 SLC26A8Q96RN1 970 aa32.33■■■□□ 2.77
SYMPK-212ENST00000598896 ABCC11Q96J66 1382 aa32.32■■■□□ 2.76
SYMPK-212ENST00000598896 KNDC1Q76NI1 1749 aa32.32■■■□□ 2.76
SYMPK-212ENST00000598896 PRAM1Q96QH2 718 aa32.31■■■□□ 2.76
SYMPK-212ENST00000598896 DIP2AQ14689 1571 aa32.3■■■□□ 2.76
SYMPK-212ENST00000598896 SLC24A1O60721 1099 aa32.29■■■□□ 2.76
SYMPK-212ENST00000598896 SAFB2Q14151 953 aaKnown RBP eCLIP32.29■■■□□ 2.76
SYMPK-212ENST00000598896 ANKLE2Q86XL3 938 aa32.29■■■□□ 2.76
SYMPK-212ENST00000598896 TECPR2O15040 1411 aa32.28■■■□□ 2.76
SYMPK-212ENST00000598896 MYOM1P52179 1685 aa32.27■■■□□ 2.76
SYMPK-212ENST00000598896 CDCA8Q53HL2 280 aa32.27■■■□□ 2.76
SYMPK-212ENST00000598896 TULP4Q9NRJ4 1543 aa32.27■■■□□ 2.76
SYMPK-212ENST00000598896 CPS1P31327 1500 aa32.26■■■□□ 2.75
SYMPK-212ENST00000598896 TBX22Q9Y458 520 aa32.25■■■□□ 2.75
SYMPK-212ENST00000598896 PTPRUQ92729 1446 aa32.25■■■□□ 2.75
SYMPK-212ENST00000598896 PLEKHH1Q9ULM0 1364 aa32.25■■■□□ 2.75
SYMPK-212ENST00000598896 POGKQ9P215 609 aa32.24■■■□□ 2.75
SYMPK-212ENST00000598896 WAPLQ7Z5K2 1190 aa32.22■■■□□ 2.75
SYMPK-212ENST00000598896 ANP32CO43423 234 aa32.21■■■□□ 2.75
SYMPK-212ENST00000598896 FAM135BQ49AJ0 1406 aa32.19■■■□□ 2.74
SYMPK-212ENST00000598896 MINK1Q8N4C8 1332 aaPredicted RBP32.18■■■□□ 2.74
SYMPK-212ENST00000598896 ROBO2Q9HCK4 1378 aa32.18■■■□□ 2.74
SYMPK-212ENST00000598896 EVC2Q86UK5 1308 aa32.17■■■□□ 2.74
SYMPK-212ENST00000598896 SIRT1Q96EB6 747 aa32.16■■■□□ 2.74
SYMPK-212ENST00000598896 NPHP4O75161 1426 aaPredicted RBP32.15■■■□□ 2.74
SYMPK-212ENST00000598896 XRN1Q8IZH2 1706 aaKnown RBP32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms