RNA–Protein interactions for RNA: ENST00000598698.5

FARP1-225, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-225ENST00000598698 RABGEF1Q9UJ41 708 aa12.34□□□□□ -0.43
FARP1-225ENST00000598698 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
FARP1-225ENST00000598698 PTPN5P54829 565 aa12.33□□□□□ -0.44
FARP1-225ENST00000598698 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
FARP1-225ENST00000598698 PTGDRQ13258 359 aa12.32□□□□□ -0.44
FARP1-225ENST00000598698 WNT2BQ93097 391 aa12.32□□□□□ -0.44
FARP1-225ENST00000598698 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
FARP1-225ENST00000598698 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
FARP1-225ENST00000598698 COL9A1P20849 921 aa12.3□□□□□ -0.44
FARP1-225ENST00000598698 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
FARP1-225ENST00000598698 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
FARP1-225ENST00000598698 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
FARP1-225ENST00000598698 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
FARP1-225ENST00000598698 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
FARP1-225ENST00000598698 POM121Q96HA1 1249 aa12.27□□□□□ -0.45
FARP1-225ENST00000598698 CLCN1P35523 988 aa12.25□□□□□ -0.45
FARP1-225ENST00000598698 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
FARP1-225ENST00000598698 CCDC97Q96F63 343 aaPredicted RBP12.25□□□□□ -0.45
FARP1-225ENST00000598698 RAD21O60216 631 aa12.24□□□□□ -0.45
FARP1-225ENST00000598698 SKIV2LQ15477 1246 aaKnown RBP12.24□□□□□ -0.45
FARP1-225ENST00000598698 ANKK1Q8NFD2 765 aa12.24□□□□□ -0.45
FARP1-225ENST00000598698 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
FARP1-225ENST00000598698 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
FARP1-225ENST00000598698 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
FARP1-225ENST00000598698 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
FARP1-225ENST00000598698 FNBP4Q8N3X1 1017 aaPredicted RBP12.21□□□□□ -0.45
FARP1-225ENST00000598698 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
FARP1-225ENST00000598698 CDHR5Q9HBB8 845 aa12.21□□□□□ -0.45
FARP1-225ENST00000598698 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
FARP1-225ENST00000598698 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
FARP1-225ENST00000598698 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
FARP1-225ENST00000598698 BEGAINQ9BUH8 593 aa12.19□□□□□ -0.46
FARP1-225ENST00000598698 TRAIPQ9BWF2 469 aa12.19□□□□□ -0.46
FARP1-225ENST00000598698 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
FARP1-225ENST00000598698 RGS20O76081 388 aa12.18□□□□□ -0.46
FARP1-225ENST00000598698 KCTD17Q8N5Z5 321 aa12.18□□□□□ -0.46
FARP1-225ENST00000598698 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
FARP1-225ENST00000598698 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
FARP1-225ENST00000598698 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
FARP1-225ENST00000598698 PHOX2BQ99453 314 aa12.17□□□□□ -0.46
FARP1-225ENST00000598698 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
FARP1-225ENST00000598698 MAP3K7O43318 606 aa12.14□□□□□ -0.47
FARP1-225ENST00000598698 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
FARP1-225ENST00000598698 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
FARP1-225ENST00000598698 NPDC1Q9NQX5 325 aaPredicted RBP12.14□□□□□ -0.47
FARP1-225ENST00000598698 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
FARP1-225ENST00000598698 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
FARP1-225ENST00000598698 BCAMP50895 628 aa12.12□□□□□ -0.47
FARP1-225ENST00000598698 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
FARP1-225ENST00000598698 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
FARP1-225ENST00000598698 A0A0G2JS52 829 aa12.11□□□□□ -0.47
FARP1-225ENST00000598698 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
FARP1-225ENST00000598698 FAM217BQ9NTX9 383 aaPredicted RBP12.11□□□□□ -0.47
FARP1-225ENST00000598698 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
FARP1-225ENST00000598698 TSR1Q2NL82 804 aaKnown RBP12.1□□□□□ -0.47
FARP1-225ENST00000598698 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
FARP1-225ENST00000598698 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
FARP1-225ENST00000598698 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
FARP1-225ENST00000598698 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
FARP1-225ENST00000598698 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
FARP1-225ENST00000598698 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
FARP1-225ENST00000598698 TSKSQ9UJT2 592 aa12.08□□□□□ -0.48
FARP1-225ENST00000598698 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
FARP1-225ENST00000598698 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
FARP1-225ENST00000598698 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
FARP1-225ENST00000598698 WBP1LQ9NX94 342 aa12.06□□□□□ -0.48
FARP1-225ENST00000598698 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
FARP1-225ENST00000598698 PRSS12P56730 875 aa12.05□□□□□ -0.48
FARP1-225ENST00000598698 CDCA7LQ96GN5 454 aa12.05□□□□□ -0.48
FARP1-225ENST00000598698 TSR3Q9UJK0 312 aaKnown RBP12.05□□□□□ -0.48
FARP1-225ENST00000598698 RFC5P40937 340 aa12.04□□□□□ -0.48
FARP1-225ENST00000598698 METTL3Q86U44 580 aaKnown RBP12.04□□□□□ -0.48
FARP1-225ENST00000598698 BANK1Q8NDB2 785 aa12.04□□□□□ -0.48
FARP1-225ENST00000598698 TBC1D2Q9BYX2 928 aa12.01□□□□□ -0.49
FARP1-225ENST00000598698 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
FARP1-225ENST00000598698 OATP04181 439 aa12□□□□□ -0.49
FARP1-225ENST00000598698 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
FARP1-225ENST00000598698 IRF5Q13568 498 aa11.99□□□□□ -0.49
FARP1-225ENST00000598698 TMCO4Q5TGY1 634 aa11.99□□□□□ -0.49
FARP1-225ENST00000598698 FBXO31Q5XUX0 539 aaPredicted RBP11.99□□□□□ -0.49
FARP1-225ENST00000598698 NBPF26B4DH59 902 aa11.98□□□□□ -0.49
FARP1-225ENST00000598698 KCNC4Q03721 635 aa11.98□□□□□ -0.49
FARP1-225ENST00000598698 GDPD2Q9HCC8 539 aa11.98□□□□□ -0.49
FARP1-225ENST00000598698 FAM198AQ9UFP1 575 aa11.98□□□□□ -0.49
FARP1-225ENST00000598698 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
FARP1-225ENST00000598698 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
FARP1-225ENST00000598698 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
FARP1-225ENST00000598698 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
FARP1-225ENST00000598698 LIMD1Q9UGP4 676 aa11.97□□□□□ -0.49
FARP1-225ENST00000598698 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
FARP1-225ENST00000598698 TATDN2Q93075 761 aa11.96□□□□□ -0.49
FARP1-225ENST00000598698 ADGRG1Q9Y653 693 aa11.96□□□□□ -0.49
FARP1-225ENST00000598698 PPP4CP60510 307 aa11.95□□□□□ -0.5
FARP1-225ENST00000598698 CALR3Q96L12 384 aaKnown RBP11.95□□□□□ -0.5
FARP1-225ENST00000598698 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
FARP1-225ENST00000598698 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
FARP1-225ENST00000598698 PNMA3Q9UL41 463 aa11.94□□□□□ -0.5
FARP1-225ENST00000598698 SMAPO00193 183 aa11.93□□□□□ -0.5
FARP1-225ENST00000598698 ABL2P42684 1182 aa11.93□□□□□ -0.5
FARP1-225ENST00000598698 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms