RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MYO5BQ9ULV0 1848 aa20.88■□□□□ 0.93
SCAF1-203ENST00000598359 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
SCAF1-203ENST00000598359 LRRC7Q96NW7 1537 aa20.87■□□□□ 0.93
SCAF1-203ENST00000598359 NAIPQ13075 1403 aa20.87■□□□□ 0.93
SCAF1-203ENST00000598359 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
SCAF1-203ENST00000598359 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
SCAF1-203ENST00000598359 BCANQ96GW7 911 aa20.83■□□□□ 0.93
SCAF1-203ENST00000598359 ZFYVE9O95405 1425 aa20.83■□□□□ 0.93
SCAF1-203ENST00000598359 RIMS2Q9UQ26 1411 aa20.83■□□□□ 0.93
SCAF1-203ENST00000598359 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
SCAF1-203ENST00000598359 PPP1R15AO75807 674 aaPredicted RBP20.8■□□□□ 0.92
SCAF1-203ENST00000598359 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
SCAF1-203ENST00000598359 RBM33Q96EV2 1170 aaKnown RBP20.77■□□□□ 0.92
SCAF1-203ENST00000598359 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
SCAF1-203ENST00000598359 PLEKHG1Q9ULL1 1385 aa20.76■□□□□ 0.91
SCAF1-203ENST00000598359 TRIM52Q96A61 297 aa20.76■□□□□ 0.91
SCAF1-203ENST00000598359 XIRP1Q702N8 1843 aaKnown RBP20.76■□□□□ 0.91
SCAF1-203ENST00000598359 KCNA6P17658 529 aa20.75■□□□□ 0.91
SCAF1-203ENST00000598359 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
SCAF1-203ENST00000598359 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
SCAF1-203ENST00000598359 HDGFP51858 240 aaKnown RBP20.72■□□□□ 0.91
SCAF1-203ENST00000598359 PROSER2Q86WR7 435 aaPredicted RBP20.72■□□□□ 0.91
SCAF1-203ENST00000598359 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.72■□□□□ 0.91
SCAF1-203ENST00000598359 CLTCL1P53675 1640 aa20.71■□□□□ 0.91
SCAF1-203ENST00000598359 NWD1Q149M9 1564 aa20.7■□□□□ 0.9
SCAF1-203ENST00000598359 ADAMTS13Q76LX8 1427 aa20.69■□□□□ 0.9
SCAF1-203ENST00000598359 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
SCAF1-203ENST00000598359 TRPM2O94759 1503 aa20.68■□□□□ 0.9
SCAF1-203ENST00000598359 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
SCAF1-203ENST00000598359 TBX22Q9Y458 520 aa20.67■□□□□ 0.9
SCAF1-203ENST00000598359 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
SCAF1-203ENST00000598359 FOXD1Q16676 465 aa20.65■□□□□ 0.9
SCAF1-203ENST00000598359 CHD2O14647 1828 aaKnown RBP20.64■□□□□ 0.9
SCAF1-203ENST00000598359 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
SCAF1-203ENST00000598359 NRXN3Q9Y4C0 1643 aa20.6■□□□□ 0.89
SCAF1-203ENST00000598359 NEXMIFQ5QGS0 1516 aa20.6■□□□□ 0.89
SCAF1-203ENST00000598359 PTPRUQ92729 1446 aa20.6■□□□□ 0.89
SCAF1-203ENST00000598359 POTEAQ6S8J7 498 aa20.59■□□□□ 0.89
SCAF1-203ENST00000598359 MSH6P52701 1360 aa20.58■□□□□ 0.88
SCAF1-203ENST00000598359 KIF1BO60333 1816 aa20.57■□□□□ 0.88
SCAF1-203ENST00000598359 AMOTL2Q9Y2J4 779 aa20.57■□□□□ 0.88
SCAF1-203ENST00000598359 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
SCAF1-203ENST00000598359 SETD1AO15047 1707 aaKnown RBP20.56■□□□□ 0.88
SCAF1-203ENST00000598359 C14orf37Q86TY3 774 aa20.55■□□□□ 0.88
SCAF1-203ENST00000598359 METP08581 1390 aa20.55■□□□□ 0.88
SCAF1-203ENST00000598359 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
SCAF1-203ENST00000598359 FAM135BQ49AJ0 1406 aa20.54■□□□□ 0.88
SCAF1-203ENST00000598359 MPHOSPH9Q99550 1183 aa20.54■□□□□ 0.88
SCAF1-203ENST00000598359 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
SCAF1-203ENST00000598359 SETD5Q9C0A6 1442 aa20.52■□□□□ 0.87
SCAF1-203ENST00000598359 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
SCAF1-203ENST00000598359 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
SCAF1-203ENST00000598359 NCOA3Q9Y6Q9 1424 aa20.48■□□□□ 0.87
SCAF1-203ENST00000598359 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.47■□□□□ 0.87
SCAF1-203ENST00000598359 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
SCAF1-203ENST00000598359 RGL3Q3MIN7 710 aa20.47■□□□□ 0.87
SCAF1-203ENST00000598359 RAB3GAP2Q9H2M9 1393 aa20.46■□□□□ 0.87
SCAF1-203ENST00000598359 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
SCAF1-203ENST00000598359 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
SCAF1-203ENST00000598359 PPLO60437 1756 aa20.45■□□□□ 0.86
SCAF1-203ENST00000598359 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
SCAF1-203ENST00000598359 ATF3P18847 181 aa20.44■□□□□ 0.86
SCAF1-203ENST00000598359 CADPS2Q86UW7 1296 aa20.42■□□□□ 0.86
SCAF1-203ENST00000598359 SPATA31E1Q6ZUB1 1445 aa20.42■□□□□ 0.86
SCAF1-203ENST00000598359 ADGRF5Q8IZF2 1346 aa20.41■□□□□ 0.86
SCAF1-203ENST00000598359 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
SCAF1-203ENST00000598359 ROBO2Q9HCK4 1378 aa20.38■□□□□ 0.85
SCAF1-203ENST00000598359 NALCNQ8IZF0 1738 aa20.36■□□□□ 0.85
SCAF1-203ENST00000598359 IFT172Q9UG01 1749 aa20.36■□□□□ 0.85
SCAF1-203ENST00000598359 ADGRL3Q9HAR2 1447 aa20.36■□□□□ 0.85
SCAF1-203ENST00000598359 BRINP3Q76B58 766 aa20.35■□□□□ 0.85
SCAF1-203ENST00000598359 DCCP43146 1447 aa20.35■□□□□ 0.85
SCAF1-203ENST00000598359 MST1RQ04912 1400 aa20.35■□□□□ 0.85
SCAF1-203ENST00000598359 COL16A1Q07092 1604 aaPredicted RBP20.35■□□□□ 0.85
SCAF1-203ENST00000598359 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
SCAF1-203ENST00000598359 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
SCAF1-203ENST00000598359 ANKRD30BQ9BXX2 1392 aa20.33■□□□□ 0.84
SCAF1-203ENST00000598359 UPF1Q92900 1129 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCAF1-203ENST00000598359 AHDC1Q5TGY3 1603 aaPredicted RBP20.31■□□□□ 0.84
SCAF1-203ENST00000598359 TMEM132EQ6IEE7 984 aa20.31■□□□□ 0.84
SCAF1-203ENST00000598359 STK26Q9P289 416 aa20.31■□□□□ 0.84
SCAF1-203ENST00000598359 JCADQ9P266 1359 aa20.31■□□□□ 0.84
SCAF1-203ENST00000598359 ASXL1Q8IXJ9 1541 aa20.3■□□□□ 0.84
SCAF1-203ENST00000598359 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
SCAF1-203ENST00000598359 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
SCAF1-203ENST00000598359 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
SCAF1-203ENST00000598359 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
SCAF1-203ENST00000598359 WAPLQ7Z5K2 1190 aa20.25■□□□□ 0.83
SCAF1-203ENST00000598359 LRPPRCP42704 1394 aaKnown RBP20.24■□□□□ 0.83
SCAF1-203ENST00000598359 LRP6O75581 1613 aa20.24■□□□□ 0.83
SCAF1-203ENST00000598359 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
SCAF1-203ENST00000598359 CFAP70Q5T0N1 1121 aa20.23■□□□□ 0.83
SCAF1-203ENST00000598359 ORAI2Q96SN7 254 aa20.23■□□□□ 0.83
SCAF1-203ENST00000598359 NHSL1Q5SYE7 1610 aa20.23■□□□□ 0.83
SCAF1-203ENST00000598359 SRCAPQ6ZRS2 3230 aa20.23■□□□□ 0.83
SCAF1-203ENST00000598359 HRCP23327 699 aa20.22■□□□□ 0.83
SCAF1-203ENST00000598359 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
SCAF1-203ENST00000598359 MYOM2P54296 1465 aa20.22■□□□□ 0.83
SCAF1-203ENST00000598359 NRXN1Q9ULB1 1477 aa20.22■□□□□ 0.83
SCAF1-203ENST00000598359 YTHDC2Q9H6S0 1430 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms