RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
SNRPA-202ENST00000596860 SLIT1O75093 1534 aa12.62□□□□□ -0.39
SNRPA-202ENST00000596860 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
SNRPA-202ENST00000596860 NRXN1Q9ULB1 1477 aa12.61□□□□□ -0.39
SNRPA-202ENST00000596860 PPP1R15AO75807 674 aaPredicted RBP12.61□□□□□ -0.39
SNRPA-202ENST00000596860 CEBPAP49715 358 aaPredicted RBP12.61□□□□□ -0.39
SNRPA-202ENST00000596860 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
SNRPA-202ENST00000596860 ARHGAP23Q9P227 1491 aa12.6□□□□□ -0.39
SNRPA-202ENST00000596860 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
SNRPA-202ENST00000596860 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNRPA-202ENST00000596860 TMEM2Q9UHN6 1383 aa12.58□□□□□ -0.4
SNRPA-202ENST00000596860 LAMC1P11047 1609 aa12.58□□□□□ -0.4
SNRPA-202ENST00000596860 PRAG1Q86YV5 1406 aa12.57□□□□□ -0.4
SNRPA-202ENST00000596860 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
SNRPA-202ENST00000596860 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
SNRPA-202ENST00000596860 DMRT2Q9Y5R5 561 aa12.57□□□□□ -0.4
SNRPA-202ENST00000596860 PIK3C2GO75747 1445 aa12.55□□□□□ -0.4
SNRPA-202ENST00000596860 RIMS2Q9UQ26 1411 aa12.55□□□□□ -0.4
SNRPA-202ENST00000596860 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
SNRPA-202ENST00000596860 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
SNRPA-202ENST00000596860 ZNF326Q5BKZ1 582 aaKnown RBP12.55□□□□□ -0.4
SNRPA-202ENST00000596860 DCAF11Q8TEB1 546 aa12.55□□□□□ -0.4
SNRPA-202ENST00000596860 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
SNRPA-202ENST00000596860 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
SNRPA-202ENST00000596860 HSPA2P54652 639 aa12.54□□□□□ -0.4
SNRPA-202ENST00000596860 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
SNRPA-202ENST00000596860 SETBP1Q9Y6X0 1596 aa12.54□□□□□ -0.4
SNRPA-202ENST00000596860 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
SNRPA-202ENST00000596860 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.41
SNRPA-202ENST00000596860 SCAF11Q99590 1463 aaKnown RBP12.52□□□□□ -0.41
SNRPA-202ENST00000596860 DIP2AQ14689 1571 aa12.52□□□□□ -0.41
SNRPA-202ENST00000596860 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
SNRPA-202ENST00000596860 STRCQ7RTU9 1775 aa12.51□□□□□ -0.41
SNRPA-202ENST00000596860 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
SNRPA-202ENST00000596860 MED14O60244 1454 aa12.51□□□□□ -0.41
SNRPA-202ENST00000596860 C14orf93Q9H972 538 aaKnown RBP12.5□□□□□ -0.41
SNRPA-202ENST00000596860 SETD1AO15047 1707 aaKnown RBP12.49□□□□□ -0.41
SNRPA-202ENST00000596860 NRXN3Q9Y4C0 1643 aa12.49□□□□□ -0.41
SNRPA-202ENST00000596860 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
SNRPA-202ENST00000596860 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
SNRPA-202ENST00000596860 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
SNRPA-202ENST00000596860 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
SNRPA-202ENST00000596860 PLPPR3Q6T4P5 718 aa12.47□□□□□ -0.41
SNRPA-202ENST00000596860 TXNDC2Q86VQ3 553 aa12.47□□□□□ -0.41
SNRPA-202ENST00000596860 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
SNRPA-202ENST00000596860 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
SNRPA-202ENST00000596860 PIK3R4Q99570 1358 aa12.46□□□□□ -0.41
SNRPA-202ENST00000596860 IQGAP1P46940 1657 aa12.46□□□□□ -0.41
SNRPA-202ENST00000596860 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
SNRPA-202ENST00000596860 LTKP29376 864 aa12.45□□□□□ -0.42
SNRPA-202ENST00000596860 IQSEC2Q5JU85 1478 aa12.45□□□□□ -0.42
SNRPA-202ENST00000596860 ADAMTS13Q76LX8 1427 aa12.45□□□□□ -0.42
SNRPA-202ENST00000596860 TBX22Q9Y458 520 aa12.44□□□□□ -0.42
SNRPA-202ENST00000596860 KNDC1Q76NI1 1749 aa12.44□□□□□ -0.42
SNRPA-202ENST00000596860 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
SNRPA-202ENST00000596860 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
SNRPA-202ENST00000596860 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
SNRPA-202ENST00000596860 TECPR2O15040 1411 aa12.42□□□□□ -0.42
SNRPA-202ENST00000596860 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
SNRPA-202ENST00000596860 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
SNRPA-202ENST00000596860 ASXL1Q8IXJ9 1541 aa12.42□□□□□ -0.42
SNRPA-202ENST00000596860 SIRT1Q96EB6 747 aa12.41□□□□□ -0.42
SNRPA-202ENST00000596860 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
SNRPA-202ENST00000596860 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNRPA-202ENST00000596860 LRPPRCP42704 1394 aaKnown RBP12.4□□□□□ -0.42
SNRPA-202ENST00000596860 ABCC11Q96J66 1382 aa12.4□□□□□ -0.42
SNRPA-202ENST00000596860 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
SNRPA-202ENST00000596860 YTHDC2Q9H6S0 1430 aaKnown RBP12.39□□□□□ -0.43
SNRPA-202ENST00000596860 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
SNRPA-202ENST00000596860 USP47Q96K76 1375 aa12.39□□□□□ -0.43
SNRPA-202ENST00000596860 SBNO2Q9Y2G9 1366 aa12.39□□□□□ -0.43
SNRPA-202ENST00000596860 ARHGEF28Q8N1W1 1705 aaKnown RBP12.39□□□□□ -0.43
SNRPA-202ENST00000596860 CPS1P31327 1500 aa12.38□□□□□ -0.43
SNRPA-202ENST00000596860 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
SNRPA-202ENST00000596860 NUTM2DQ5VT03 806 aaPredicted RBP12.38□□□□□ -0.43
SNRPA-202ENST00000596860 NWD1Q149M9 1564 aa12.38□□□□□ -0.43
SNRPA-202ENST00000596860 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
SNRPA-202ENST00000596860 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
SNRPA-202ENST00000596860 LTBP4Q8N2S1 1624 aa12.37□□□□□ -0.43
SNRPA-202ENST00000596860 METP08581 1390 aa12.35□□□□□ -0.43
SNRPA-202ENST00000596860 BCANQ96GW7 911 aa12.34□□□□□ -0.43
SNRPA-202ENST00000596860 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
SNRPA-202ENST00000596860 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
SNRPA-202ENST00000596860 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
SNRPA-202ENST00000596860 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
SNRPA-202ENST00000596860 CENPJQ9HC77 1338 aaPredicted RBP12.32□□□□□ -0.44
SNRPA-202ENST00000596860 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
SNRPA-202ENST00000596860 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
SNRPA-202ENST00000596860 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
SNRPA-202ENST00000596860 KCNA6P17658 529 aa12.31□□□□□ -0.44
SNRPA-202ENST00000596860 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
SNRPA-202ENST00000596860 SLC26A8Q96RN1 970 aa12.31□□□□□ -0.44
SNRPA-202ENST00000596860 ADGRB2O60241 1585 aa12.3□□□□□ -0.44
SNRPA-202ENST00000596860 ST20-MTHFSA0A0A6YYL1 179 aa12.3□□□□□ -0.44
SNRPA-202ENST00000596860 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
SNRPA-202ENST00000596860 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
SNRPA-202ENST00000596860 TESK2Q96S53 571 aa12.29□□□□□ -0.44
SNRPA-202ENST00000596860 AMOTL2Q9Y2J4 779 aa12.29□□□□□ -0.44
SNRPA-202ENST00000596860 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
SNRPA-202ENST00000596860 TRAK1Q9UPV9 953 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms