RNA–Protein interactions for RNA: ENST00000595794.5

C19orf48-204, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 1 (best)

Gene C19orf48, Length 941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-204ENST00000595794 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
C19orf48-204ENST00000595794 CHIC2Q9UKJ5 165 aa17.05■□□□□ 0.32
C19orf48-204ENST00000595794 NOS1P29475 1434 aa17.04■□□□□ 0.32
C19orf48-204ENST00000595794 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
C19orf48-204ENST00000595794 SLAIN2Q9P270 581 aa17.02■□□□□ 0.32
C19orf48-204ENST00000595794 CHD2O14647 1828 aaKnown RBP17.02■□□□□ 0.31
C19orf48-204ENST00000595794 MYO5BQ9ULV0 1848 aa17.02■□□□□ 0.31
C19orf48-204ENST00000595794 JCADQ9P266 1359 aa17.01■□□□□ 0.31
C19orf48-204ENST00000595794 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
C19orf48-204ENST00000595794 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
C19orf48-204ENST00000595794 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
C19orf48-204ENST00000595794 GCC2Q8IWJ2 1684 aa16.99■□□□□ 0.31
C19orf48-204ENST00000595794 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
C19orf48-204ENST00000595794 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
C19orf48-204ENST00000595794 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
C19orf48-204ENST00000595794 ADGRL2O95490 1459 aa16.97■□□□□ 0.31
C19orf48-204ENST00000595794 ZFYVE9O95405 1425 aa16.96■□□□□ 0.31
C19orf48-204ENST00000595794 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.3
C19orf48-204ENST00000595794 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.3
C19orf48-204ENST00000595794 TMEM131LA2VDJ0 1609 aa16.95■□□□□ 0.3
C19orf48-204ENST00000595794 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
C19orf48-204ENST00000595794 TBX22Q9Y458 520 aa16.94■□□□□ 0.3
C19orf48-204ENST00000595794 ANKRD50Q9ULJ7 1429 aa16.94■□□□□ 0.3
C19orf48-204ENST00000595794 NCOA3Q9Y6Q9 1424 aa16.94■□□□□ 0.3
C19orf48-204ENST00000595794 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
C19orf48-204ENST00000595794 MEX3CQ5U5Q3 659 aaKnown RBP16.92■□□□□ 0.3
C19orf48-204ENST00000595794 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
C19orf48-204ENST00000595794 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
C19orf48-204ENST00000595794 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
C19orf48-204ENST00000595794 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
C19orf48-204ENST00000595794 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
C19orf48-204ENST00000595794 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
C19orf48-204ENST00000595794 DIP2AQ14689 1571 aa16.89■□□□□ 0.3
C19orf48-204ENST00000595794 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
C19orf48-204ENST00000595794 ATF3P18847 181 aa16.89■□□□□ 0.29
C19orf48-204ENST00000595794 LRP6O75581 1613 aa16.88■□□□□ 0.29
C19orf48-204ENST00000595794 AHDC1Q5TGY3 1603 aaPredicted RBP16.88■□□□□ 0.29
C19orf48-204ENST00000595794 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
C19orf48-204ENST00000595794 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
C19orf48-204ENST00000595794 UNC13BO14795 1591 aa16.87■□□□□ 0.29
C19orf48-204ENST00000595794 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
C19orf48-204ENST00000595794 E9PCH4 1651 aa16.86■□□□□ 0.29
C19orf48-204ENST00000595794 NUTM2DQ5VT03 806 aaPredicted RBP16.86■□□□□ 0.29
C19orf48-204ENST00000595794 TRIM52Q96A61 297 aa16.85■□□□□ 0.29
C19orf48-204ENST00000595794 TRPM2O94759 1503 aa16.85■□□□□ 0.29
C19orf48-204ENST00000595794 UPF1Q92900 1129 aaKnown RBP eCLIP16.83■□□□□ 0.28not detected■■■■■ 45.2
C19orf48-204ENST00000595794 RXRBP28702 533 aa16.82■□□□□ 0.28
C19orf48-204ENST00000595794 IQGAP3Q86VI3 1631 aa16.81■□□□□ 0.28
C19orf48-204ENST00000595794 AMOTL2Q9Y2J4 779 aa16.81■□□□□ 0.28
C19orf48-204ENST00000595794 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
C19orf48-204ENST00000595794 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
C19orf48-204ENST00000595794 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
C19orf48-204ENST00000595794 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
C19orf48-204ENST00000595794 DCCP43146 1447 aa16.79■□□□□ 0.28
C19orf48-204ENST00000595794 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
C19orf48-204ENST00000595794 CDK12Q9NYV4 1490 aaPredicted RBP16.77■□□□□ 0.28
C19orf48-204ENST00000595794 PTPRUQ92729 1446 aa16.77■□□□□ 0.27
C19orf48-204ENST00000595794 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
C19orf48-204ENST00000595794 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
C19orf48-204ENST00000595794 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
C19orf48-204ENST00000595794 AFF2P51816 1311 aa16.75■□□□□ 0.27
C19orf48-204ENST00000595794 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
C19orf48-204ENST00000595794 NUP155O75694 1391 aa16.75■□□□□ 0.27
C19orf48-204ENST00000595794 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
C19orf48-204ENST00000595794 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
C19orf48-204ENST00000595794 MST1RQ04912 1400 aa16.73■□□□□ 0.27
C19orf48-204ENST00000595794 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
C19orf48-204ENST00000595794 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
C19orf48-204ENST00000595794 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
C19orf48-204ENST00000595794 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
C19orf48-204ENST00000595794 C8orf37Q96NL8 207 aa16.7■□□□□ 0.26
C19orf48-204ENST00000595794 METP08581 1390 aa16.68■□□□□ 0.26
C19orf48-204ENST00000595794 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
C19orf48-204ENST00000595794 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
C19orf48-204ENST00000595794 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
C19orf48-204ENST00000595794 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
C19orf48-204ENST00000595794 HRCP23327 699 aa16.67■□□□□ 0.26
C19orf48-204ENST00000595794 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
C19orf48-204ENST00000595794 RGS12O14924 1447 aa16.66■□□□□ 0.26
C19orf48-204ENST00000595794 ITGAEP38570 1179 aa16.66■□□□□ 0.26
C19orf48-204ENST00000595794 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
C19orf48-204ENST00000595794 KIF1BO60333 1816 aa16.64■□□□□ 0.25
C19orf48-204ENST00000595794 NGLY1Q96IV0 654 aa16.63■□□□□ 0.25
C19orf48-204ENST00000595794 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
C19orf48-204ENST00000595794 ADAMTS2O95450 1211 aa16.62■□□□□ 0.25
C19orf48-204ENST00000595794 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
C19orf48-204ENST00000595794 LAMC1P11047 1609 aa16.61■□□□□ 0.25
C19orf48-204ENST00000595794 CLTCL1P53675 1640 aa16.61■□□□□ 0.25
C19orf48-204ENST00000595794 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
C19orf48-204ENST00000595794 USP21Q9UK80 565 aa16.58■□□□□ 0.24
C19orf48-204ENST00000595794 PTCH1Q13635 1447 aa16.58■□□□□ 0.24
C19orf48-204ENST00000595794 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.24
C19orf48-204ENST00000595794 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
C19orf48-204ENST00000595794 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
C19orf48-204ENST00000595794 FOXD1Q16676 465 aa16.56■□□□□ 0.24
C19orf48-204ENST00000595794 ORAI2Q96SN7 254 aa16.56■□□□□ 0.24
C19orf48-204ENST00000595794 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
C19orf48-204ENST00000595794 COL22A1Q8NFW1 1626 aaPredicted RBP16.55■□□□□ 0.24
C19orf48-204ENST00000595794 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
C19orf48-204ENST00000595794 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms