RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 GCC2Q8IWJ2 1684 aa19.42■□□□□ 0.7
CLPP-202ENST00000594780 TMEM94Q12767 1356 aa19.42■□□□□ 0.7
CLPP-202ENST00000594780 NUP155O75694 1391 aa19.41■□□□□ 0.7
CLPP-202ENST00000594780 EFCAB6Q5THR3 1501 aa19.39■□□□□ 0.69
CLPP-202ENST00000594780 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
CLPP-202ENST00000594780 TET3O43151 1660 aa19.37■□□□□ 0.69
CLPP-202ENST00000594780 IQGAP3Q86VI3 1631 aa19.37■□□□□ 0.69
CLPP-202ENST00000594780 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
CLPP-202ENST00000594780 RBM33Q96EV2 1170 aaKnown RBP19.35■□□□□ 0.69
CLPP-202ENST00000594780 NOS1P29475 1434 aa19.34■□□□□ 0.69
CLPP-202ENST00000594780 JCADQ9P266 1359 aa19.34■□□□□ 0.69
CLPP-202ENST00000594780 RPRD2Q5VT52 1461 aaKnown RBP19.34■□□□□ 0.69
CLPP-202ENST00000594780 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
CLPP-202ENST00000594780 SHPRHQ149N8 1683 aa19.33■□□□□ 0.68
CLPP-202ENST00000594780 NKTRP30414 1462 aaKnown RBP19.32■□□□□ 0.68
CLPP-202ENST00000594780 E9PCH4 1651 aa19.31■□□□□ 0.68
CLPP-202ENST00000594780 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
CLPP-202ENST00000594780 IDI1Q13907 227 aa19.3■□□□□ 0.68
CLPP-202ENST00000594780 TMEM2Q9UHN6 1383 aa19.3■□□□□ 0.68
CLPP-202ENST00000594780 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
CLPP-202ENST00000594780 KCNA6P17658 529 aa19.27■□□□□ 0.68
CLPP-202ENST00000594780 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
CLPP-202ENST00000594780 SLC52A1Q9NWF4 448 aa19.26■□□□□ 0.67
CLPP-202ENST00000594780 PROSER2Q86WR7 435 aaPredicted RBP19.25■□□□□ 0.67
CLPP-202ENST00000594780 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
CLPP-202ENST00000594780 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
CLPP-202ENST00000594780 EID1Q9Y6B2 187 aa19.24■□□□□ 0.67
CLPP-202ENST00000594780 DIP2AQ14689 1571 aa19.23■□□□□ 0.67
CLPP-202ENST00000594780 MSH6P52701 1360 aa19.23■□□□□ 0.67
CLPP-202ENST00000594780 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
CLPP-202ENST00000594780 SLC26A8Q96RN1 970 aa19.22■□□□□ 0.67
CLPP-202ENST00000594780 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
CLPP-202ENST00000594780 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
CLPP-202ENST00000594780 HRCP23327 699 aa19.21■□□□□ 0.67
CLPP-202ENST00000594780 SLAIN2Q9P270 581 aa19.21■□□□□ 0.67
CLPP-202ENST00000594780 SPATA31A6Q5VVP1 1343 aa19.21■□□□□ 0.67
CLPP-202ENST00000594780 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
CLPP-202ENST00000594780 STAG3Q9UJ98 1225 aa19.2■□□□□ 0.66
CLPP-202ENST00000594780 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
CLPP-202ENST00000594780 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
CLPP-202ENST00000594780 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.19■□□□□ 0.66
CLPP-202ENST00000594780 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
CLPP-202ENST00000594780 RGS12O14924 1447 aa19.17■□□□□ 0.66
CLPP-202ENST00000594780 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
CLPP-202ENST00000594780 MEX3CQ5U5Q3 659 aaKnown RBP19.17■□□□□ 0.66
CLPP-202ENST00000594780 TMEM131LA2VDJ0 1609 aa19.15■□□□□ 0.66
CLPP-202ENST00000594780 RXRBP28702 533 aa19.15■□□□□ 0.66
CLPP-202ENST00000594780 FOXD1Q16676 465 aa19.15■□□□□ 0.66
CLPP-202ENST00000594780 TRPM2O94759 1503 aa19.12■□□□□ 0.65
CLPP-202ENST00000594780 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
CLPP-202ENST00000594780 SETBP1Q9Y6X0 1596 aa19.1■□□□□ 0.65
CLPP-202ENST00000594780 CLTCL1P53675 1640 aa19.1■□□□□ 0.65
CLPP-202ENST00000594780 EP400Q96L91 3159 aa19.09■□□□□ 0.65
CLPP-202ENST00000594780 NHSL1Q5SYE7 1610 aa19.09■□□□□ 0.65
CLPP-202ENST00000594780 ZFYVE9O95405 1425 aa19.08■□□□□ 0.65
CLPP-202ENST00000594780 AFF2P51816 1311 aa19.08■□□□□ 0.65
CLPP-202ENST00000594780 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
CLPP-202ENST00000594780 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
CLPP-202ENST00000594780 NUTM2BA6NNL0 878 aaPredicted RBP19.04■□□□□ 0.64
CLPP-202ENST00000594780 NUTM2EB1AL46 878 aaPredicted RBP19.04■□□□□ 0.64
CLPP-202ENST00000594780 HDGFP51858 240 aaKnown RBP19.04■□□□□ 0.64
CLPP-202ENST00000594780 NUTM2AQ8IVF1 878 aaPredicted RBP19.04■□□□□ 0.64
CLPP-202ENST00000594780 NCOA3Q9Y6Q9 1424 aa19.04■□□□□ 0.64
CLPP-202ENST00000594780 ASXL1Q8IXJ9 1541 aa19.04■□□□□ 0.64
CLPP-202ENST00000594780 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
CLPP-202ENST00000594780 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
CLPP-202ENST00000594780 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
CLPP-202ENST00000594780 KIF1BO60333 1816 aa19.02■□□□□ 0.64
CLPP-202ENST00000594780 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
CLPP-202ENST00000594780 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
CLPP-202ENST00000594780 BRINP3Q76B58 766 aa19■□□□□ 0.63
CLPP-202ENST00000594780 CCER1Q8TC90 406 aaPredicted RBP19■□□□□ 0.63
CLPP-202ENST00000594780 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
CLPP-202ENST00000594780 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
CLPP-202ENST00000594780 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
CLPP-202ENST00000594780 BCANQ96GW7 911 aa18.99■□□□□ 0.63
CLPP-202ENST00000594780 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
CLPP-202ENST00000594780 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
CLPP-202ENST00000594780 ZEB1P37275 1124 aaPredicted RBP18.96■□□□□ 0.63
CLPP-202ENST00000594780 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
CLPP-202ENST00000594780 CADPS2Q86UW7 1296 aa18.96■□□□□ 0.63
CLPP-202ENST00000594780 SPATA31E1Q6ZUB1 1445 aa18.96■□□□□ 0.63
CLPP-202ENST00000594780 XRN1Q8IZH2 1706 aaKnown RBP18.95■□□□□ 0.62
CLPP-202ENST00000594780 C14orf37Q86TY3 774 aa18.95■□□□□ 0.62
CLPP-202ENST00000594780 C8orf37Q96NL8 207 aa18.95■□□□□ 0.62
CLPP-202ENST00000594780 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
CLPP-202ENST00000594780 ATAD2Q6PL18 1390 aa18.94■□□□□ 0.62
CLPP-202ENST00000594780 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
CLPP-202ENST00000594780 QTRT2Q9H974 415 aaKnown RBP18.94■□□□□ 0.62
CLPP-202ENST00000594780 MST1RQ04912 1400 aa18.93■□□□□ 0.62
CLPP-202ENST00000594780 PTPRUQ92729 1446 aa18.93■□□□□ 0.62
CLPP-202ENST00000594780 ATF3P18847 181 aa18.93■□□□□ 0.62
CLPP-202ENST00000594780 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
CLPP-202ENST00000594780 PNPLA6Q8IY17 1366 aa18.93■□□□□ 0.62
CLPP-202ENST00000594780 RGL3Q3MIN7 710 aa18.92■□□□□ 0.62
CLPP-202ENST00000594780 DCCP43146 1447 aa18.91■□□□□ 0.62
CLPP-202ENST00000594780 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
CLPP-202ENST00000594780 VGFO15240 615 aaPredicted RBP18.9■□□□□ 0.62
CLPP-202ENST00000594780 ZRANB1Q9UGI0 708 aa18.9■□□□□ 0.62
CLPP-202ENST00000594780 NALCNQ8IZF0 1738 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms