RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
LIG1-206ENST00000594067 PTPRTO14522 1441 aa21.71■■□□□ 1.07
LIG1-206ENST00000594067 RTEL1-TNFRSF6BF6WH68 1400 aa21.7■■□□□ 1.06
LIG1-206ENST00000594067 MS4A1P11836 297 aa21.7■■□□□ 1.06
LIG1-206ENST00000594067 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.06
LIG1-206ENST00000594067 CLTCL1P53675 1640 aa21.7■■□□□ 1.06
LIG1-206ENST00000594067 SCAPERQ9BY12 1400 aa21.69■■□□□ 1.06
LIG1-206ENST00000594067 SPHKAPQ2M3C7 1700 aa21.68■■□□□ 1.06
LIG1-206ENST00000594067 DUSP27Q5VZP5 1158 aa21.68■■□□□ 1.06
LIG1-206ENST00000594067 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
LIG1-206ENST00000594067 SYNMO15061 1565 aa21.67■■□□□ 1.06
LIG1-206ENST00000594067 KIF3BO15066 747 aa21.66■■□□□ 1.06
LIG1-206ENST00000594067 CEP152O94986 1710 aa21.66■■□□□ 1.06
LIG1-206ENST00000594067 ASXL1Q8IXJ9 1541 aa21.66■■□□□ 1.06
LIG1-206ENST00000594067 KANK1Q14678 1352 aa21.65■■□□□ 1.06
LIG1-206ENST00000594067 CCDC146Q8IYE0 955 aa21.64■■□□□ 1.06
LIG1-206ENST00000594067 GOLGA2Q08379 1002 aa21.64■■□□□ 1.05
LIG1-206ENST00000594067 ZNF521Q96K83 1311 aa21.64■■□□□ 1.05
LIG1-206ENST00000594067 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
LIG1-206ENST00000594067 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
LIG1-206ENST00000594067 EIF3AQ14152 1382 aaKnown RBP21.63■■□□□ 1.05
LIG1-206ENST00000594067 LAS1LQ9Y4W2 734 aaKnown RBP21.62■■□□□ 1.05
LIG1-206ENST00000594067 PIK3C2GO75747 1445 aa21.61■■□□□ 1.05
LIG1-206ENST00000594067 DEPDC5O75140 1603 aa21.61■■□□□ 1.05
LIG1-206ENST00000594067 TET3O43151 1660 aa21.61■■□□□ 1.05
LIG1-206ENST00000594067 USP35Q9P2H5 1018 aa21.6■■□□□ 1.05
LIG1-206ENST00000594067 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
LIG1-206ENST00000594067 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
LIG1-206ENST00000594067 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
LIG1-206ENST00000594067 NEFMP07197 916 aa21.59■■□□□ 1.05
LIG1-206ENST00000594067 MYOM1P52179 1685 aa21.59■■□□□ 1.05
LIG1-206ENST00000594067 FANCAO15360 1455 aa21.59■■□□□ 1.05
LIG1-206ENST00000594067 SLFN5Q08AF3 891 aa21.58■■□□□ 1.05
LIG1-206ENST00000594067 UGGT1Q9NYU2 1555 aa21.58■■□□□ 1.05
LIG1-206ENST00000594067 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.04
LIG1-206ENST00000594067 KDM2BQ8NHM5 1336 aa21.57■■□□□ 1.04
LIG1-206ENST00000594067 APAF1O14727 1248 aa21.57■■□□□ 1.04
LIG1-206ENST00000594067 VWDEQ8N2E2 1590 aa21.56■■□□□ 1.04
LIG1-206ENST00000594067 SPINK5Q9NQ38 1064 aaPredicted RBP21.56■■□□□ 1.04
LIG1-206ENST00000594067 INO80Q9ULG1 1556 aaPredicted RBP21.55■■□□□ 1.04
LIG1-206ENST00000594067 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
LIG1-206ENST00000594067 CARD14Q9BXL6 1004 aa21.54■■□□□ 1.04
LIG1-206ENST00000594067 KDM5AP29375 1690 aaKnown RBP21.54■■□□□ 1.04
LIG1-206ENST00000594067 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
LIG1-206ENST00000594067 PPM1GO15355 546 aaPredicted RBP21.53■■□□□ 1.04
LIG1-206ENST00000594067 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
LIG1-206ENST00000594067 CENPQQ7L2Z9 268 aaPredicted RBP21.53■■□□□ 1.04
LIG1-206ENST00000594067 TRMT2AQ8IZ69 625 aaKnown RBP21.52■■□□□ 1.03
LIG1-206ENST00000594067 KIAA1210Q9ULL0 1709 aa21.51■■□□□ 1.03
LIG1-206ENST00000594067 ABCA9Q8IUA7 1624 aa21.51■■□□□ 1.03
LIG1-206ENST00000594067 ABCA6Q8N139 1617 aa21.51■■□□□ 1.03
LIG1-206ENST00000594067 MAP3K4Q9Y6R4 1608 aa21.51■■□□□ 1.03
LIG1-206ENST00000594067 IL27Q8NEV9 243 aa21.51■■□□□ 1.03
LIG1-206ENST00000594067 MYOM2P54296 1465 aa21.49■■□□□ 1.03
LIG1-206ENST00000594067 MROH1Q8NDA8 1641 aa21.49■■□□□ 1.03
LIG1-206ENST00000594067 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
LIG1-206ENST00000594067 SLC24A1O60721 1099 aa21.48■■□□□ 1.03
LIG1-206ENST00000594067 BCAR3O75815 825 aa21.48■■□□□ 1.03
LIG1-206ENST00000594067 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
LIG1-206ENST00000594067 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
LIG1-206ENST00000594067 NEURL4Q96JN8 1562 aa21.46■■□□□ 1.03
LIG1-206ENST00000594067 NKTRP30414 1462 aaKnown RBP21.46■■□□□ 1.03
LIG1-206ENST00000594067 E9PSI1 815 aa21.45■■□□□ 1.02
LIG1-206ENST00000594067 EFCAB6Q5THR3 1501 aa21.44■■□□□ 1.02
LIG1-206ENST00000594067 NOS1P29475 1434 aa21.43■■□□□ 1.02
LIG1-206ENST00000594067 RGS3P49796 1198 aa21.43■■□□□ 1.02
LIG1-206ENST00000594067 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
LIG1-206ENST00000594067 CENPJQ9HC77 1338 aaPredicted RBP21.43■■□□□ 1.02
LIG1-206ENST00000594067 KIF1BO60333 1816 aa21.43■■□□□ 1.02
LIG1-206ENST00000594067 MROH2AA6NES4 1674 aa21.42■■□□□ 1.02
LIG1-206ENST00000594067 TNNT2P45379 298 aaPredicted RBP21.42■■□□□ 1.02
LIG1-206ENST00000594067 FAM161AQ3B820 660 aa21.42■■□□□ 1.02
LIG1-206ENST00000594067 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
LIG1-206ENST00000594067 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
LIG1-206ENST00000594067 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
LIG1-206ENST00000594067 SLC4A3P48751 1232 aa21.4■■□□□ 1.02
LIG1-206ENST00000594067 NRXN1Q9ULB1 1477 aa21.39■■□□□ 1.01
LIG1-206ENST00000594067 MORC1Q86VD1 984 aa21.39■■□□□ 1.01
LIG1-206ENST00000594067 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.01
LIG1-206ENST00000594067 IFT172Q9UG01 1749 aa21.38■■□□□ 1.01
LIG1-206ENST00000594067 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
LIG1-206ENST00000594067 ANO8Q9HCE9 1232 aaPredicted RBP21.38■■□□□ 1.01
LIG1-206ENST00000594067 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
LIG1-206ENST00000594067 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
LIG1-206ENST00000594067 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
LIG1-206ENST00000594067 KIDINS220Q9ULH0 1771 aa21.37■■□□□ 1.01
LIG1-206ENST00000594067 NEUROD2Q15784 382 aa21.37■■□□□ 1.01
LIG1-206ENST00000594067 TMEM132EQ6IEE7 984 aa21.37■■□□□ 1.01
LIG1-206ENST00000594067 NFKBIBQ15653 356 aa21.37■■□□□ 1.01
LIG1-206ENST00000594067 GGT6Q6P531 493 aa21.36■■□□□ 1.01
LIG1-206ENST00000594067 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
LIG1-206ENST00000594067 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
LIG1-206ENST00000594067 RRP7AQ9Y3A4 280 aaKnown RBP21.35■■□□□ 1.01
LIG1-206ENST00000594067 MYO3AQ8NEV4 1616 aa21.35■■□□□ 1.01
LIG1-206ENST00000594067 ADGRB3O60242 1522 aa21.34■■□□□ 1.01
LIG1-206ENST00000594067 IGHDP01880 384 aa21.34■■□□□ 1.01
LIG1-206ENST00000594067 GSE1Q14687 1217 aa21.34■■□□□ 1.01
LIG1-206ENST00000594067 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
LIG1-206ENST00000594067 LMTK2Q8IWU2 1503 aa21.34■■□□□ 1.01
LIG1-206ENST00000594067 CANXP27824 592 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms