RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
LDLRAD4-219ENST00000593236 EFCAB6Q5THR3 1501 aa18.98■□□□□ 0.63
LDLRAD4-219ENST00000593236 TET3O43151 1660 aa18.98■□□□□ 0.63
LDLRAD4-219ENST00000593236 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
LDLRAD4-219ENST00000593236 HRCP23327 699 aa18.96■□□□□ 0.63
LDLRAD4-219ENST00000593236 SLC4A1APQ9BWU0 796 aaKnown RBP18.96■□□□□ 0.63
LDLRAD4-219ENST00000593236 NOS1P29475 1434 aa18.96■□□□□ 0.63
LDLRAD4-219ENST00000593236 KCNA6P17658 529 aa18.94■□□□□ 0.62
LDLRAD4-219ENST00000593236 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
LDLRAD4-219ENST00000593236 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
LDLRAD4-219ENST00000593236 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
LDLRAD4-219ENST00000593236 E9PCH4 1651 aa18.92■□□□□ 0.62
LDLRAD4-219ENST00000593236 MPHOSPH9Q99550 1183 aa18.92■□□□□ 0.62
LDLRAD4-219ENST00000593236 FAM135BQ49AJ0 1406 aa18.91■□□□□ 0.62
LDLRAD4-219ENST00000593236 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
LDLRAD4-219ENST00000593236 SLC52A1Q9NWF4 448 aa18.91■□□□□ 0.62
LDLRAD4-219ENST00000593236 RGS17Q9UGC6 210 aaPredicted RBP18.91■□□□□ 0.62
LDLRAD4-219ENST00000593236 FOXD1Q16676 465 aa18.9■□□□□ 0.62
LDLRAD4-219ENST00000593236 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
LDLRAD4-219ENST00000593236 ADGRB3O60242 1522 aa18.9■□□□□ 0.62
LDLRAD4-219ENST00000593236 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
LDLRAD4-219ENST00000593236 BCANQ96GW7 911 aa18.85■□□□□ 0.61
LDLRAD4-219ENST00000593236 NWD1Q149M9 1564 aa18.84■□□□□ 0.61
LDLRAD4-219ENST00000593236 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
LDLRAD4-219ENST00000593236 ZFYVE9O95405 1425 aa18.83■□□□□ 0.61
LDLRAD4-219ENST00000593236 DHX57Q6P158 1386 aaKnown RBP18.83■□□□□ 0.61
LDLRAD4-219ENST00000593236 ROBO1Q9Y6N7 1651 aa18.83■□□□□ 0.61
LDLRAD4-219ENST00000593236 SPHKAPQ2M3C7 1700 aa18.82■□□□□ 0.6
LDLRAD4-219ENST00000593236 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
LDLRAD4-219ENST00000593236 RIMS2Q9UQ26 1411 aa18.81■□□□□ 0.6
LDLRAD4-219ENST00000593236 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
LDLRAD4-219ENST00000593236 CHD2O14647 1828 aaKnown RBP18.8■□□□□ 0.6
LDLRAD4-219ENST00000593236 TMEM131LA2VDJ0 1609 aa18.8■□□□□ 0.6
LDLRAD4-219ENST00000593236 TRPM2O94759 1503 aa18.79■□□□□ 0.6
LDLRAD4-219ENST00000593236 HDGFP51858 240 aaKnown RBP18.79■□□□□ 0.6
LDLRAD4-219ENST00000593236 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
LDLRAD4-219ENST00000593236 MSH6P52701 1360 aa18.79■□□□□ 0.6
LDLRAD4-219ENST00000593236 PPP1R15AO75807 674 aaPredicted RBP18.78■□□□□ 0.6
LDLRAD4-219ENST00000593236 POTEAQ6S8J7 498 aa18.77■□□□□ 0.6
LDLRAD4-219ENST00000593236 TBX22Q9Y458 520 aa18.77■□□□□ 0.6
LDLRAD4-219ENST00000593236 CHGAP10645 457 aaKnown RBP18.76■□□□□ 0.59
LDLRAD4-219ENST00000593236 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
LDLRAD4-219ENST00000593236 NUTM2DQ5VT03 806 aaPredicted RBP18.75■□□□□ 0.59
LDLRAD4-219ENST00000593236 ANKRD30BQ9BXX2 1392 aa18.75■□□□□ 0.59
LDLRAD4-219ENST00000593236 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.74■□□□□ 0.59
LDLRAD4-219ENST00000593236 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
LDLRAD4-219ENST00000593236 ADAMTS13Q76LX8 1427 aa18.73■□□□□ 0.59
LDLRAD4-219ENST00000593236 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
LDLRAD4-219ENST00000593236 NCOA3Q9Y6Q9 1424 aa18.71■□□□□ 0.59
LDLRAD4-219ENST00000593236 JCADQ9P266 1359 aa18.68■□□□□ 0.58
LDLRAD4-219ENST00000593236 CCER1Q8TC90 406 aaPredicted RBP18.68■□□□□ 0.58
LDLRAD4-219ENST00000593236 C14orf37Q86TY3 774 aa18.67■□□□□ 0.58
LDLRAD4-219ENST00000593236 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
LDLRAD4-219ENST00000593236 C19orf44Q9H6X5 657 aa18.66■□□□□ 0.58
LDLRAD4-219ENST00000593236 DIP2AQ14689 1571 aa18.66■□□□□ 0.58
LDLRAD4-219ENST00000593236 COL16A1Q07092 1604 aaPredicted RBP18.66■□□□□ 0.58
LDLRAD4-219ENST00000593236 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
LDLRAD4-219ENST00000593236 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
LDLRAD4-219ENST00000593236 AMOTL2Q9Y2J4 779 aa18.65■□□□□ 0.58
LDLRAD4-219ENST00000593236 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
LDLRAD4-219ENST00000593236 CADPS2Q86UW7 1296 aa18.64■□□□□ 0.57
LDLRAD4-219ENST00000593236 KIF1BO60333 1816 aa18.63■□□□□ 0.57
LDLRAD4-219ENST00000593236 ATF3P18847 181 aa18.63■□□□□ 0.57
LDLRAD4-219ENST00000593236 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
LDLRAD4-219ENST00000593236 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
LDLRAD4-219ENST00000593236 SPATA31E1Q6ZUB1 1445 aa18.61■□□□□ 0.57
LDLRAD4-219ENST00000593236 RGL3Q3MIN7 710 aa18.61■□□□□ 0.57
LDLRAD4-219ENST00000593236 LRP6O75581 1613 aa18.6■□□□□ 0.57
LDLRAD4-219ENST00000593236 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
LDLRAD4-219ENST00000593236 AHDC1Q5TGY3 1603 aaPredicted RBP18.6■□□□□ 0.57
LDLRAD4-219ENST00000593236 BRINP3Q76B58 766 aa18.58■□□□□ 0.56
LDLRAD4-219ENST00000593236 NRXN3Q9Y4C0 1643 aa18.58■□□□□ 0.56
LDLRAD4-219ENST00000593236 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
LDLRAD4-219ENST00000593236 ZEB1P37275 1124 aaPredicted RBP18.57■□□□□ 0.56
LDLRAD4-219ENST00000593236 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
LDLRAD4-219ENST00000593236 NEXMIFQ5QGS0 1516 aa18.55■□□□□ 0.56
LDLRAD4-219ENST00000593236 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
LDLRAD4-219ENST00000593236 MEX3CQ5U5Q3 659 aaKnown RBP18.55■□□□□ 0.56
LDLRAD4-219ENST00000593236 METP08581 1390 aa18.55■□□□□ 0.56
LDLRAD4-219ENST00000593236 XRN1Q8IZH2 1706 aaKnown RBP18.54■□□□□ 0.56
LDLRAD4-219ENST00000593236 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
LDLRAD4-219ENST00000593236 DCCP43146 1447 aa18.53■□□□□ 0.56
LDLRAD4-219ENST00000593236 ZNF772Q68DY9 489 aaPredicted RBP18.53■□□□□ 0.56
LDLRAD4-219ENST00000593236 MST1RQ04912 1400 aa18.51■□□□□ 0.55
LDLRAD4-219ENST00000593236 RPGRIP1LQ68CZ1 1315 aa18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 PPLO60437 1756 aa18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 ASXL1Q8IXJ9 1541 aa18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 NUTM2BA6NNL0 878 aaPredicted RBP18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 NUTM2EB1AL46 878 aaPredicted RBP18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 NUTM2AQ8IVF1 878 aaPredicted RBP18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 TONSLQ96HA7 1378 aa18.5■□□□□ 0.55
LDLRAD4-219ENST00000593236 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
LDLRAD4-219ENST00000593236 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
LDLRAD4-219ENST00000593236 L3MBTL2Q969R5 705 aa18.48■□□□□ 0.55
LDLRAD4-219ENST00000593236 KDM2AQ9Y2K7 1162 aa18.48■□□□□ 0.55
LDLRAD4-219ENST00000593236 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
LDLRAD4-219ENST00000593236 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
LDLRAD4-219ENST00000593236 UPF1Q92900 1129 aaKnown RBP eCLIP18.46■□□□□ 0.55
LDLRAD4-219ENST00000593236 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
LDLRAD4-219ENST00000593236 MYOM2P54296 1465 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms