RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 LRPPRCP42704 1394 aaKnown RBP26.72■■□□□ 1.87
MBD3-209ENST00000592012 CFAP65Q6ZU64 1925 aaKnown RBP26.71■■□□□ 1.87
MBD3-209ENST00000592012 IFT172Q9UG01 1749 aa26.71■■□□□ 1.87
MBD3-209ENST00000592012 MROH2AA6NES4 1674 aa26.7■■□□□ 1.86
MBD3-209ENST00000592012 CFAP70Q5T0N1 1121 aa26.7■■□□□ 1.86
MBD3-209ENST00000592012 NLRP13Q86W25 1043 aa26.7■■□□□ 1.86
MBD3-209ENST00000592012 ABCC3O15438 1527 aa26.69■■□□□ 1.86
MBD3-209ENST00000592012 RICTORQ6R327 1708 aa26.68■■□□□ 1.86
MBD3-209ENST00000592012 DIP2CQ9Y2E4 1556 aa26.67■■□□□ 1.86
MBD3-209ENST00000592012 NRXN1Q9ULB1 1477 aa26.67■■□□□ 1.86
MBD3-209ENST00000592012 ADGRB3O60242 1522 aa26.67■■□□□ 1.86
MBD3-209ENST00000592012 GLI2P10070 1586 aa26.67■■□□□ 1.86
MBD3-209ENST00000592012 EIF3AQ14152 1382 aaKnown RBP26.66■■□□□ 1.86
MBD3-209ENST00000592012 CDCA8Q53HL2 280 aa26.66■■□□□ 1.86
MBD3-209ENST00000592012 CC2D1BQ5T0F9 858 aaKnown RBP26.65■■□□□ 1.86
MBD3-209ENST00000592012 CHGAP10645 457 aaKnown RBP26.62■■□□□ 1.85
MBD3-209ENST00000592012 IRX6P78412 446 aaPredicted RBP26.62■■□□□ 1.85
MBD3-209ENST00000592012 SMG6Q86US8 1419 aaKnown RBP26.62■■□□□ 1.85
MBD3-209ENST00000592012 NOS1P29475 1434 aa26.61■■□□□ 1.85
MBD3-209ENST00000592012 CAMSAP1Q5T5Y3 1602 aa26.6■■□□□ 1.85
MBD3-209ENST00000592012 YEATS2Q9ULM3 1422 aa26.59■■□□□ 1.85
MBD3-209ENST00000592012 ERICH6BQ5W0A0 696 aa26.58■■□□□ 1.85
MBD3-209ENST00000592012 SLC24A1O60721 1099 aa26.57■■□□□ 1.84
MBD3-209ENST00000592012 SYNMO15061 1565 aa26.57■■□□□ 1.84
MBD3-209ENST00000592012 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
MBD3-209ENST00000592012 NUDCQ9Y266 331 aa26.56■■□□□ 1.84
MBD3-209ENST00000592012 PPLO60437 1756 aa26.56■■□□□ 1.84
MBD3-209ENST00000592012 FAM69CQ0P6D2 419 aa26.56■■□□□ 1.84
MBD3-209ENST00000592012 TSHZ2Q9NRE2 1034 aa26.56■■□□□ 1.84
MBD3-209ENST00000592012 RPGRIP1LQ68CZ1 1315 aa26.55■■□□□ 1.84
MBD3-209ENST00000592012 KNSTRNQ9Y448 316 aa26.55■■□□□ 1.84
MBD3-209ENST00000592012 ARHGAP31Q2M1Z3 1444 aa26.54■■□□□ 1.84
MBD3-209ENST00000592012 SENP3-EIF4A1A0A087X0R7 540 aa26.54■■□□□ 1.84
MBD3-209ENST00000592012 PIK3C2GO75747 1445 aa26.53■■□□□ 1.84
MBD3-209ENST00000592012 SETBP1Q9Y6X0 1596 aa26.53■■□□□ 1.84
MBD3-209ENST00000592012 AMER1Q5JTC6 1135 aaPredicted RBP26.53■■□□□ 1.84
MBD3-209ENST00000592012 C14orf93Q9H972 538 aaKnown RBP26.53■■□□□ 1.84
MBD3-209ENST00000592012 MYOM1P52179 1685 aa26.52■■□□□ 1.84
MBD3-209ENST00000592012 PIK3C2BO00750 1634 aa26.52■■□□□ 1.84
MBD3-209ENST00000592012 DIP2BQ9P265 1576 aa26.51■■□□□ 1.83
MBD3-209ENST00000592012 ERVK-7P63135 1459 aa26.51■■□□□ 1.83
MBD3-209ENST00000592012 KDM5AP29375 1690 aaKnown RBP26.5■■□□□ 1.83
MBD3-209ENST00000592012 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
MBD3-209ENST00000592012 MYO3AQ8NEV4 1616 aa26.49■■□□□ 1.83
MBD3-209ENST00000592012 SBNO2Q9Y2G9 1366 aa26.48■■□□□ 1.83
MBD3-209ENST00000592012 ZMYM4Q5VZL5 1548 aa26.47■■□□□ 1.83
MBD3-209ENST00000592012 INSRP06213 1382 aa26.46■■□□□ 1.83
MBD3-209ENST00000592012 ASXL1Q8IXJ9 1541 aa26.45■■□□□ 1.83
MBD3-209ENST00000592012 ADGRB1O14514 1584 aa26.45■■□□□ 1.83
MBD3-209ENST00000592012 PPP4R2Q9NY27 417 aa26.44■■□□□ 1.82
MBD3-209ENST00000592012 NPC1L1Q9UHC9 1359 aa26.44■■□□□ 1.82
MBD3-209ENST00000592012 IDI1Q13907 227 aa26.44■■□□□ 1.82
MBD3-209ENST00000592012 RNF123Q5XPI4 1314 aa26.44■■□□□ 1.82
MBD3-209ENST00000592012 CENPJQ9HC77 1338 aaPredicted RBP26.44■■□□□ 1.82
MBD3-209ENST00000592012 PPP2R1AP30153 589 aa26.43■■□□□ 1.82
MBD3-209ENST00000592012 SLC52A1Q9NWF4 448 aa26.42■■□□□ 1.82
MBD3-209ENST00000592012 TRAK1Q9UPV9 953 aa26.42■■□□□ 1.82
MBD3-209ENST00000592012 TSPOAP1O95153 1857 aa26.42■■□□□ 1.82
MBD3-209ENST00000592012 VGFO15240 615 aaPredicted RBP26.41■■□□□ 1.82
MBD3-209ENST00000592012 TMEM132EQ6IEE7 984 aa26.41■■□□□ 1.82
MBD3-209ENST00000592012 NEXMIFQ5QGS0 1516 aa26.41■■□□□ 1.82
MBD3-209ENST00000592012 BLMP54132 1417 aaPredicted RBP26.39■■□□□ 1.82
MBD3-209ENST00000592012 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
MBD3-209ENST00000592012 NUTM2DQ5VT03 806 aaPredicted RBP26.38■■□□□ 1.81
MBD3-209ENST00000592012 PDE3BQ13370 1112 aa26.36■■□□□ 1.81
MBD3-209ENST00000592012 CARD14Q9BXL6 1004 aa26.36■■□□□ 1.81
MBD3-209ENST00000592012 SALL2Q9Y467 1007 aaPredicted RBP26.36■■□□□ 1.81
MBD3-209ENST00000592012 PREX1Q8TCU6 1659 aa26.35■■□□□ 1.81
MBD3-209ENST00000592012 ADAMTS8Q9UP79 889 aa26.33■■□□□ 1.81
MBD3-209ENST00000592012 ZFYVE9O95405 1425 aa26.33■■□□□ 1.81
MBD3-209ENST00000592012 QRICH2Q9H0J4 1663 aa26.33■■□□□ 1.81
MBD3-209ENST00000592012 REREQ9P2R6 1566 aa26.31■■□□□ 1.8
MBD3-209ENST00000592012 TMEM131LA2VDJ0 1609 aa26.3■■□□□ 1.8
MBD3-209ENST00000592012 MYO5BQ9ULV0 1848 aa26.3■■□□□ 1.8
MBD3-209ENST00000592012 FBXO31Q5XUX0 539 aaPredicted RBP26.29■■□□□ 1.8
MBD3-209ENST00000592012 AGLP35573 1532 aa26.28■■□□□ 1.8
MBD3-209ENST00000592012 PPP6R1Q9UPN7 881 aa26.28■■□□□ 1.8
MBD3-209ENST00000592012 B4GALNT3Q6L9W6 998 aa26.27■■□□□ 1.8
MBD3-209ENST00000592012 WDR43Q15061 677 aaKnown RBP eCLIP26.26■■□□□ 1.79
MBD3-209ENST00000592012 CDCA7LQ96GN5 454 aa26.25■■□□□ 1.79
MBD3-209ENST00000592012 SLC12A5Q9H2X9 1139 aa26.25■■□□□ 1.79
MBD3-209ENST00000592012 ARHGEF28Q8N1W1 1705 aaKnown RBP26.24■■□□□ 1.79
MBD3-209ENST00000592012 PUS7Q96PZ0 661 aaKnown RBP26.22■■□□□ 1.79
MBD3-209ENST00000592012 RCAN3Q9UKA8 241 aa26.21■■□□□ 1.79
MBD3-209ENST00000592012 EVC2Q86UK5 1308 aa26.2■■□□□ 1.78
MBD3-209ENST00000592012 NSD3Q9BZ95 1437 aa26.18■■□□□ 1.78
MBD3-209ENST00000592012 KIF13AQ9H1H9 1805 aa26.18■■□□□ 1.78
MBD3-209ENST00000592012 RRP1P56182 461 aaKnown RBP26.17■■□□□ 1.78
MBD3-209ENST00000592012 TULP4Q9NRJ4 1543 aa26.17■■□□□ 1.78
MBD3-209ENST00000592012 RBM19Q9Y4C8 960 aaKnown RBP26.17■■□□□ 1.78
MBD3-209ENST00000592012 CLTCQ00610 1675 aaKnown RBP26.16■■□□□ 1.78
MBD3-209ENST00000592012 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
MBD3-209ENST00000592012 STK26Q9P289 416 aa26.14■■□□□ 1.78
MBD3-209ENST00000592012 PLEKHH1Q9ULM0 1364 aa26.13■■□□□ 1.77
MBD3-209ENST00000592012 STAG3Q9UJ98 1225 aa26.12■■□□□ 1.77
MBD3-209ENST00000592012 ZNF521Q96K83 1311 aa26.12■■□□□ 1.77
MBD3-209ENST00000592012 SAFB2Q14151 953 aaKnown RBP eCLIP26.11■■□□□ 1.77
MBD3-209ENST00000592012 MLECQ14165 292 aa26.11■■□□□ 1.77
MBD3-209ENST00000592012 SPATA31D1Q6ZQQ2 1576 aa26.11■■□□□ 1.77
MBD3-209ENST00000592012 MORC1Q86VD1 984 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 244.4 ms