RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
NEDD4L-228ENST00000590248 XIRP1Q702N8 1843 aaKnown RBP20.74■□□□□ 0.91
NEDD4L-228ENST00000590248 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
NEDD4L-228ENST00000590248 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
NEDD4L-228ENST00000590248 RIMS2Q9UQ26 1411 aa20.73■□□□□ 0.91
NEDD4L-228ENST00000590248 TOM1O60784 492 aa20.73■□□□□ 0.91
NEDD4L-228ENST00000590248 HFM1A2PYH4 1435 aa20.71■□□□□ 0.91
NEDD4L-228ENST00000590248 PPP1R15AO75807 674 aaPredicted RBP20.71■□□□□ 0.91
NEDD4L-228ENST00000590248 RBM33Q96EV2 1170 aaKnown RBP20.7■□□□□ 0.9
NEDD4L-228ENST00000590248 ALKQ9UM73 1620 aa20.7■□□□□ 0.9
NEDD4L-228ENST00000590248 HDGFP51858 240 aaKnown RBP20.69■□□□□ 0.9
NEDD4L-228ENST00000590248 KCNA6P17658 529 aa20.67■□□□□ 0.9
NEDD4L-228ENST00000590248 PLEKHG1Q9ULL1 1385 aa20.66■□□□□ 0.9
NEDD4L-228ENST00000590248 HSPA1LP34931 641 aa20.65■□□□□ 0.9
NEDD4L-228ENST00000590248 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.65■□□□□ 0.9
NEDD4L-228ENST00000590248 CHD2O14647 1828 aaKnown RBP20.64■□□□□ 0.9
NEDD4L-228ENST00000590248 CLTCL1P53675 1640 aa20.64■□□□□ 0.9
NEDD4L-228ENST00000590248 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
NEDD4L-228ENST00000590248 ZNF326Q5BKZ1 582 aaKnown RBP20.63■□□□□ 0.89
NEDD4L-228ENST00000590248 PROSER2Q86WR7 435 aaPredicted RBP20.63■□□□□ 0.89
NEDD4L-228ENST00000590248 KIF1BO60333 1816 aa20.62■□□□□ 0.89
NEDD4L-228ENST00000590248 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
NEDD4L-228ENST00000590248 FOXD1Q16676 465 aa20.61■□□□□ 0.89
NEDD4L-228ENST00000590248 TBX22Q9Y458 520 aa20.6■□□□□ 0.89
NEDD4L-228ENST00000590248 ADAMTS13Q76LX8 1427 aa20.6■□□□□ 0.89
NEDD4L-228ENST00000590248 TRPM2O94759 1503 aa20.59■□□□□ 0.89
NEDD4L-228ENST00000590248 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
NEDD4L-228ENST00000590248 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
NEDD4L-228ENST00000590248 NRXN3Q9Y4C0 1643 aa20.54■□□□□ 0.88
NEDD4L-228ENST00000590248 MPHOSPH9Q99550 1183 aa20.54■□□□□ 0.88
NEDD4L-228ENST00000590248 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
NEDD4L-228ENST00000590248 NEXMIFQ5QGS0 1516 aa20.53■□□□□ 0.88
NEDD4L-228ENST00000590248 PTPRUQ92729 1446 aa20.51■□□□□ 0.87
NEDD4L-228ENST00000590248 DIP2AQ14689 1571 aa20.51■□□□□ 0.87
NEDD4L-228ENST00000590248 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
NEDD4L-228ENST00000590248 SETD5Q9C0A6 1442 aa20.49■□□□□ 0.87
NEDD4L-228ENST00000590248 SETBP1Q9Y6X0 1596 aa20.48■□□□□ 0.87
NEDD4L-228ENST00000590248 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
NEDD4L-228ENST00000590248 MSH6P52701 1360 aa20.47■□□□□ 0.87
NEDD4L-228ENST00000590248 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
NEDD4L-228ENST00000590248 METP08581 1390 aa20.46■□□□□ 0.87
NEDD4L-228ENST00000590248 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
NEDD4L-228ENST00000590248 ROBO1Q9Y6N7 1651 aa20.45■□□□□ 0.86
NEDD4L-228ENST00000590248 PPLO60437 1756 aa20.45■□□□□ 0.86
NEDD4L-228ENST00000590248 RGL3Q3MIN7 710 aa20.44■□□□□ 0.86
NEDD4L-228ENST00000590248 RAB3GAP2Q9H2M9 1393 aa20.44■□□□□ 0.86
NEDD4L-228ENST00000590248 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.44■□□□□ 0.86
NEDD4L-228ENST00000590248 FAM135BQ49AJ0 1406 aa20.44■□□□□ 0.86
NEDD4L-228ENST00000590248 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
NEDD4L-228ENST00000590248 VGFO15240 615 aaPredicted RBP20.42■□□□□ 0.86
NEDD4L-228ENST00000590248 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
NEDD4L-228ENST00000590248 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
NEDD4L-228ENST00000590248 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
NEDD4L-228ENST00000590248 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
NEDD4L-228ENST00000590248 SETD1AO15047 1707 aaKnown RBP20.39■□□□□ 0.86
NEDD4L-228ENST00000590248 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
NEDD4L-228ENST00000590248 NCOA3Q9Y6Q9 1424 aa20.38■□□□□ 0.85
NEDD4L-228ENST00000590248 ADGRF5Q8IZF2 1346 aa20.36■□□□□ 0.85
NEDD4L-228ENST00000590248 ATF3P18847 181 aa20.36■□□□□ 0.85
NEDD4L-228ENST00000590248 SPATA31E1Q6ZUB1 1445 aa20.36■□□□□ 0.85
NEDD4L-228ENST00000590248 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
NEDD4L-228ENST00000590248 IFT172Q9UG01 1749 aa20.35■□□□□ 0.85
NEDD4L-228ENST00000590248 PHLPP1O60346 1717 aa20.34■□□□□ 0.85
NEDD4L-228ENST00000590248 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
NEDD4L-228ENST00000590248 NALCNQ8IZF0 1738 aa20.3■□□□□ 0.84
NEDD4L-228ENST00000590248 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
NEDD4L-228ENST00000590248 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
NEDD4L-228ENST00000590248 ANKRD30BQ9BXX2 1392 aa20.26■□□□□ 0.83
NEDD4L-228ENST00000590248 TMEM132EQ6IEE7 984 aa20.26■□□□□ 0.83
NEDD4L-228ENST00000590248 BRINP3Q76B58 766 aa20.26■□□□□ 0.83
NEDD4L-228ENST00000590248 STK26Q9P289 416 aa20.26■□□□□ 0.83
NEDD4L-228ENST00000590248 ADGRL3Q9HAR2 1447 aa20.25■□□□□ 0.83
NEDD4L-228ENST00000590248 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
NEDD4L-228ENST00000590248 MST1RQ04912 1400 aa20.24■□□□□ 0.83
NEDD4L-228ENST00000590248 DCCP43146 1447 aa20.23■□□□□ 0.83
NEDD4L-228ENST00000590248 PTCH1Q13635 1447 aa20.23■□□□□ 0.83
NEDD4L-228ENST00000590248 HRCP23327 699 aa20.22■□□□□ 0.83
NEDD4L-228ENST00000590248 PIK3C2GO75747 1445 aa20.21■□□□□ 0.83
NEDD4L-228ENST00000590248 SOCS7O14512 581 aa20.21■□□□□ 0.83
NEDD4L-228ENST00000590248 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
NEDD4L-228ENST00000590248 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
NEDD4L-228ENST00000590248 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
NEDD4L-228ENST00000590248 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
NEDD4L-228ENST00000590248 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
NEDD4L-228ENST00000590248 JCADQ9P266 1359 aa20.2■□□□□ 0.82
NEDD4L-228ENST00000590248 CFAP70Q5T0N1 1121 aa20.19■□□□□ 0.82
NEDD4L-228ENST00000590248 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
NEDD4L-228ENST00000590248 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
NEDD4L-228ENST00000590248 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
NEDD4L-228ENST00000590248 ORAI2Q96SN7 254 aa20.16■□□□□ 0.82
NEDD4L-228ENST00000590248 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
NEDD4L-228ENST00000590248 PLEKHH1Q9ULM0 1364 aa20.16■□□□□ 0.82
NEDD4L-228ENST00000590248 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
NEDD4L-228ENST00000590248 C1orf167Q5SNV9 1468 aa20.15■□□□□ 0.82
NEDD4L-228ENST00000590248 KNDC1Q76NI1 1749 aa20.14■□□□□ 0.81
NEDD4L-228ENST00000590248 MYOM2P54296 1465 aa20.14■□□□□ 0.81
NEDD4L-228ENST00000590248 NRXN1Q9ULB1 1477 aa20.14■□□□□ 0.81
NEDD4L-228ENST00000590248 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
NEDD4L-228ENST00000590248 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
NEDD4L-228ENST00000590248 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms