RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 CEP170BQ9Y4F5 1589 aaPredicted RBP21.72■■□□□ 1.07
DDX39A-211ENST00000590239 IFT172Q9UG01 1749 aa21.72■■□□□ 1.07
DDX39A-211ENST00000590239 MYOM2P54296 1465 aa21.71■■□□□ 1.07
DDX39A-211ENST00000590239 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
DDX39A-211ENST00000590239 ZNF142P52746 1687 aaPredicted RBP21.71■■□□□ 1.07
DDX39A-211ENST00000590239 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.07
DDX39A-211ENST00000590239 PPLO60437 1756 aa21.7■■□□□ 1.06
DDX39A-211ENST00000590239 ZFYVE9O95405 1425 aa21.7■■□□□ 1.06
DDX39A-211ENST00000590239 SOCS7O14512 581 aa21.69■■□□□ 1.06
DDX39A-211ENST00000590239 THEMISQ8N1K5 641 aaPredicted RBP21.69■■□□□ 1.06
DDX39A-211ENST00000590239 VGFO15240 615 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-211ENST00000590239 TMEM2Q9UHN6 1383 aa21.68■■□□□ 1.06
DDX39A-211ENST00000590239 PRAG1Q86YV5 1406 aa21.68■■□□□ 1.06
DDX39A-211ENST00000590239 RIMS2Q9UQ26 1411 aa21.67■■□□□ 1.06
DDX39A-211ENST00000590239 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
DDX39A-211ENST00000590239 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
DDX39A-211ENST00000590239 NRXN1Q9ULB1 1477 aa21.66■■□□□ 1.06
DDX39A-211ENST00000590239 NBPF8Q3BBV2 869 aa21.66■■□□□ 1.06
DDX39A-211ENST00000590239 SLIT1O75093 1534 aa21.65■■□□□ 1.06
DDX39A-211ENST00000590239 ARHGAP23Q9P227 1491 aa21.64■■□□□ 1.06
DDX39A-211ENST00000590239 ADGRF5Q8IZF2 1346 aa21.63■■□□□ 1.05
DDX39A-211ENST00000590239 RALGAPBQ86X10 1494 aa21.6■■□□□ 1.05
DDX39A-211ENST00000590239 EID1Q9Y6B2 187 aa21.6■■□□□ 1.05
DDX39A-211ENST00000590239 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
DDX39A-211ENST00000590239 NUTM2DQ5VT03 806 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-211ENST00000590239 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.04
DDX39A-211ENST00000590239 ILDR2Q71H61 639 aa21.57■■□□□ 1.04
DDX39A-211ENST00000590239 TXNDC2Q86VQ3 553 aa21.57■■□□□ 1.04
DDX39A-211ENST00000590239 TRPM1Q7Z4N2 1603 aa21.57■■□□□ 1.04
DDX39A-211ENST00000590239 LTKP29376 864 aa21.55■■□□□ 1.04
DDX39A-211ENST00000590239 C14orf93Q9H972 538 aaKnown RBP21.55■■□□□ 1.04
DDX39A-211ENST00000590239 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
DDX39A-211ENST00000590239 PLEKHG1Q9ULL1 1385 aa21.54■■□□□ 1.04
DDX39A-211ENST00000590239 ANKLE2Q86XL3 938 aa21.54■■□□□ 1.04
DDX39A-211ENST00000590239 GPRASP1Q5JY77 1395 aa21.53■■□□□ 1.04
DDX39A-211ENST00000590239 LAMC1P11047 1609 aa21.53■■□□□ 1.04
DDX39A-211ENST00000590239 SETBP1Q9Y6X0 1596 aa21.53■■□□□ 1.04
DDX39A-211ENST00000590239 ROCK2O75116 1388 aaKnown RBP21.52■■□□□ 1.04
DDX39A-211ENST00000590239 CFAP70Q5T0N1 1121 aa21.52■■□□□ 1.04
DDX39A-211ENST00000590239 NBPF1Q3BBV0 1214 aa21.5■■□□□ 1.03
DDX39A-211ENST00000590239 ALKQ9UM73 1620 aa21.48■■□□□ 1.03
DDX39A-211ENST00000590239 CARD11Q9BXL7 1154 aa21.48■■□□□ 1.03
DDX39A-211ENST00000590239 NRXN3Q9Y4C0 1643 aa21.47■■□□□ 1.03
DDX39A-211ENST00000590239 MED14O60244 1454 aa21.45■■□□□ 1.03
DDX39A-211ENST00000590239 ADGRB1O14514 1584 aa21.45■■□□□ 1.02
DDX39A-211ENST00000590239 BCANQ96GW7 911 aa21.45■■□□□ 1.02
DDX39A-211ENST00000590239 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
DDX39A-211ENST00000590239 POLR1AO95602 1720 aaPredicted RBP21.44■■□□□ 1.02
DDX39A-211ENST00000590239 ADAMTS13Q76LX8 1427 aa21.44■■□□□ 1.02
DDX39A-211ENST00000590239 DISP3Q9P2K9 1392 aa21.43■■□□□ 1.02
DDX39A-211ENST00000590239 DIP2AQ14689 1571 aa21.43■■□□□ 1.02
DDX39A-211ENST00000590239 SETD1AO15047 1707 aaKnown RBP21.42■■□□□ 1.02
DDX39A-211ENST00000590239 NPHP4O75161 1426 aaPredicted RBP21.42■■□□□ 1.02
DDX39A-211ENST00000590239 HSPA2P54652 639 aa21.42■■□□□ 1.02
DDX39A-211ENST00000590239 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
DDX39A-211ENST00000590239 TBX22Q9Y458 520 aa21.42■■□□□ 1.02
DDX39A-211ENST00000590239 USP47Q96K76 1375 aa21.41■■□□□ 1.02
DDX39A-211ENST00000590239 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-211ENST00000590239 ASXL1Q8IXJ9 1541 aa21.4■■□□□ 1.02
DDX39A-211ENST00000590239 NCKAP5LQ9HCH0 1330 aa21.4■■□□□ 1.02
DDX39A-211ENST00000590239 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
DDX39A-211ENST00000590239 METP08581 1390 aa21.37■■□□□ 1.01
DDX39A-211ENST00000590239 HSPA5P11021 654 aaKnown RBP21.37■■□□□ 1.01
DDX39A-211ENST00000590239 SLC26A8Q96RN1 970 aa21.37■■□□□ 1.01
DDX39A-211ENST00000590239 YTHDC2Q9H6S0 1430 aaKnown RBP21.37■■□□□ 1.01
DDX39A-211ENST00000590239 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
DDX39A-211ENST00000590239 EIF3AQ14152 1382 aaKnown RBP21.36■■□□□ 1.01
DDX39A-211ENST00000590239 PIK3R4Q99570 1358 aa21.36■■□□□ 1.01
DDX39A-211ENST00000590239 ABCC11Q96J66 1382 aa21.34■■□□□ 1.01
DDX39A-211ENST00000590239 CERKQ8TCT0 537 aa21.32■■□□□ 1
DDX39A-211ENST00000590239 TECPR2O15040 1411 aa21.31■■□□□ 1
DDX39A-211ENST00000590239 STRCQ7RTU9 1775 aa21.31■■□□□ 1
DDX39A-211ENST00000590239 DLC1Q96QB1 1528 aa21.31■■□□□ 1
DDX39A-211ENST00000590239 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
DDX39A-211ENST00000590239 STK26Q9P289 416 aa21.31■■□□□ 1
DDX39A-211ENST00000590239 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
DDX39A-211ENST00000590239 ZNF316A6NFI3 1004 aaPredicted RBP21.3■■□□□ 1
DDX39A-211ENST00000590239 SIRT1Q96EB6 747 aa21.3■■□□□ 1
DDX39A-211ENST00000590239 KNDC1Q76NI1 1749 aa21.28■■□□□ 1
DDX39A-211ENST00000590239 PTPRUQ92729 1446 aa21.28■■□□□ 1
DDX39A-211ENST00000590239 ARHGEF28Q8N1W1 1705 aaKnown RBP21.27■■□□□ 1
DDX39A-211ENST00000590239 HIRIP3Q9BW71 556 aaPredicted RBP21.27■■□□□ 1
DDX39A-211ENST00000590239 FAM135BQ49AJ0 1406 aa21.27■■□□□ 1
DDX39A-211ENST00000590239 CENPJQ9HC77 1338 aaPredicted RBP21.27■□□□□ 0.99
DDX39A-211ENST00000590239 CPS1P31327 1500 aa21.26■□□□□ 0.99
DDX39A-211ENST00000590239 SLC24A1O60721 1099 aa21.26■□□□□ 0.99
DDX39A-211ENST00000590239 AMOTL2Q9Y2J4 779 aa21.26■□□□□ 0.99
DDX39A-211ENST00000590239 DMRT2Q9Y5R5 561 aa21.26■□□□□ 0.99
DDX39A-211ENST00000590239 SBNO2Q9Y2G9 1366 aa21.25■□□□□ 0.99
DDX39A-211ENST00000590239 XRN1Q8IZH2 1706 aaKnown RBP21.25■□□□□ 0.99
DDX39A-211ENST00000590239 TESK2Q96S53 571 aa21.25■□□□□ 0.99
DDX39A-211ENST00000590239 CHD2O14647 1828 aaKnown RBP21.24■□□□□ 0.99
DDX39A-211ENST00000590239 PTCH1Q13635 1447 aa21.23■□□□□ 0.99
DDX39A-211ENST00000590239 PRAM1Q96QH2 718 aa21.23■□□□□ 0.99
DDX39A-211ENST00000590239 KCNA6P17658 529 aa21.22■□□□□ 0.99
DDX39A-211ENST00000590239 POGKQ9P215 609 aa21.22■□□□□ 0.99
DDX39A-211ENST00000590239 NWD1Q149M9 1564 aa21.21■□□□□ 0.99
DDX39A-211ENST00000590239 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
DDX39A-211ENST00000590239 QRICH2Q9H0J4 1663 aa21.2■□□□□ 0.98
DDX39A-211ENST00000590239 TMF1P82094 1093 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms