RNA–Protein interactions for RNA: ENST00000589367.5

NLE1-206, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-206ENST00000589367 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.18■■■□□ 2.42
NLE1-206ENST00000589367 PLEKHG1Q9ULL1 1385 aa30.17■■■□□ 2.42
NLE1-206ENST00000589367 BCANQ96GW7 911 aa30.17■■■□□ 2.42
NLE1-206ENST00000589367 TRIM52Q96A61 297 aa30.15■■■□□ 2.42
NLE1-206ENST00000589367 KCNA6P17658 529 aa30.14■■■□□ 2.42
NLE1-206ENST00000589367 MYO5BQ9ULV0 1848 aa30.11■■■□□ 2.41
NLE1-206ENST00000589367 PIP4K2BP78356 416 aa30.11■■■□□ 2.41
NLE1-206ENST00000589367 SCAF1Q9H7N4 1312 aaKnown RBP30.11■■■□□ 2.41
NLE1-206ENST00000589367 SPHKAPQ2M3C7 1700 aa30.09■■■□□ 2.41
NLE1-206ENST00000589367 SENP3Q9H4L4 574 aaPredicted RBP30.07■■■□□ 2.4
NLE1-206ENST00000589367 NUTM2DQ5VT03 806 aaPredicted RBP30.06■■■□□ 2.4
NLE1-206ENST00000589367 SLC4A1APQ9BWU0 796 aaKnown RBP30.06■■■□□ 2.4
NLE1-206ENST00000589367 TBX22Q9Y458 520 aa30.06■■■□□ 2.4
NLE1-206ENST00000589367 TRPM2O94759 1503 aa30.06■■■□□ 2.4
NLE1-206ENST00000589367 ALKQ9UM73 1620 aa30.04■■■□□ 2.4
NLE1-206ENST00000589367 TMEM94Q12767 1356 aa30.03■■■□□ 2.4
NLE1-206ENST00000589367 NKTRP30414 1462 aaKnown RBP30.02■■■□□ 2.4
NLE1-206ENST00000589367 PROSER2Q86WR7 435 aaPredicted RBP30.02■■■□□ 2.4
NLE1-206ENST00000589367 NWD1Q149M9 1564 aa30.02■■■□□ 2.4
NLE1-206ENST00000589367 ADAMTS13Q76LX8 1427 aa30■■■□□ 2.39
NLE1-206ENST00000589367 ZNF326Q5BKZ1 582 aaKnown RBP30■■■□□ 2.39
NLE1-206ENST00000589367 CLTCL1P53675 1640 aa29.98■■■□□ 2.39
NLE1-206ENST00000589367 HSPA1LP34931 641 aa29.98■■■□□ 2.39
NLE1-206ENST00000589367 DIP2AQ14689 1571 aa29.96■■■□□ 2.39
NLE1-206ENST00000589367 PIK3R4Q99570 1358 aa29.95■■■□□ 2.39
NLE1-206ENST00000589367 RBM33Q96EV2 1170 aaKnown RBP29.93■■■□□ 2.38
NLE1-206ENST00000589367 XIRP1Q702N8 1843 aaKnown RBP29.93■■■□□ 2.38
NLE1-206ENST00000589367 ACIN1Q9UKV3 1341 aaKnown RBP29.93■■■□□ 2.38
NLE1-206ENST00000589367 DISP3Q9P2K9 1392 aa29.9■■■□□ 2.38
NLE1-206ENST00000589367 SETD5Q9C0A6 1442 aa29.89■■■□□ 2.38
NLE1-206ENST00000589367 MPHOSPH9Q99550 1183 aa29.89■■■□□ 2.38
NLE1-206ENST00000589367 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
NLE1-206ENST00000589367 FOXD1Q16676 465 aa29.88■■■□□ 2.37
NLE1-206ENST00000589367 NEXMIFQ5QGS0 1516 aa29.87■■■□□ 2.37
NLE1-206ENST00000589367 SETBP1Q9Y6X0 1596 aa29.87■■■□□ 2.37
NLE1-206ENST00000589367 MSH6P52701 1360 aa29.87■■■□□ 2.37
NLE1-206ENST00000589367 NCOA3Q9Y6Q9 1424 aa29.85■■■□□ 2.37
NLE1-206ENST00000589367 KIF1BO60333 1816 aa29.84■■■□□ 2.37
NLE1-206ENST00000589367 RPGRIP1LQ68CZ1 1315 aa29.83■■■□□ 2.37
NLE1-206ENST00000589367 AMOTL2Q9Y2J4 779 aa29.83■■■□□ 2.37
NLE1-206ENST00000589367 NRXN3Q9Y4C0 1643 aa29.82■■■□□ 2.36
NLE1-206ENST00000589367 FAM135BQ49AJ0 1406 aa29.82■■■□□ 2.36
NLE1-206ENST00000589367 PTPRUQ92729 1446 aa29.81■■■□□ 2.36
NLE1-206ENST00000589367 VGFO15240 615 aaPredicted RBP29.81■■■□□ 2.36
NLE1-206ENST00000589367 CCDC144AA2RUR9 1427 aa29.8■■■□□ 2.36
NLE1-206ENST00000589367 METP08581 1390 aa29.77■■■□□ 2.36
NLE1-206ENST00000589367 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
NLE1-206ENST00000589367 C14orf37Q86TY3 774 aa29.77■■■□□ 2.36
NLE1-206ENST00000589367 C19orf44Q9H6X5 657 aa29.74■■■□□ 2.35
NLE1-206ENST00000589367 SLAIN2Q9P270 581 aa29.74■■■□□ 2.35
NLE1-206ENST00000589367 CADPS2Q86UW7 1296 aa29.7■■■□□ 2.35
NLE1-206ENST00000589367 XRN1Q8IZH2 1706 aaKnown RBP29.7■■■□□ 2.34
NLE1-206ENST00000589367 SPATA31E1Q6ZUB1 1445 aa29.7■■■□□ 2.34
NLE1-206ENST00000589367 ATF3P18847 181 aa29.67■■■□□ 2.34
NLE1-206ENST00000589367 RGL3Q3MIN7 710 aa29.67■■■□□ 2.34
NLE1-206ENST00000589367 ROBO1Q9Y6N7 1651 aa29.66■■■□□ 2.34
NLE1-206ENST00000589367 MED1Q15648 1581 aaPredicted RBP29.64■■■□□ 2.34
NLE1-206ENST00000589367 HRCP23327 699 aa29.64■■■□□ 2.34
NLE1-206ENST00000589367 PPLO60437 1756 aa29.64■■■□□ 2.34
NLE1-206ENST00000589367 ANKRD30BQ9BXX2 1392 aa29.64■■■□□ 2.33
NLE1-206ENST00000589367 ILDR2Q71H61 639 aa29.63■■■□□ 2.33
NLE1-206ENST00000589367 DCCP43146 1447 aa29.62■■■□□ 2.33
NLE1-206ENST00000589367 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.61■■■□□ 2.33
NLE1-206ENST00000589367 ADGRF5Q8IZF2 1346 aa29.61■■■□□ 2.33
NLE1-206ENST00000589367 PTCH1Q13635 1447 aa29.58■■■□□ 2.33
NLE1-206ENST00000589367 SETD1AO15047 1707 aaKnown RBP29.57■■■□□ 2.32
NLE1-206ENST00000589367 PRAG1Q86YV5 1406 aa29.56■■■□□ 2.32
NLE1-206ENST00000589367 ADGRL3Q9HAR2 1447 aa29.56■■■□□ 2.32
NLE1-206ENST00000589367 ROBO2Q9HCK4 1378 aa29.53■■■□□ 2.32
NLE1-206ENST00000589367 PHF23Q9BUL5 403 aaPredicted RBP29.51■■■□□ 2.31
NLE1-206ENST00000589367 PIK3C2GO75747 1445 aa29.5■■■□□ 2.31
NLE1-206ENST00000589367 IFT172Q9UG01 1749 aa29.49■■■□□ 2.31
NLE1-206ENST00000589367 MST1RQ04912 1400 aa29.49■■■□□ 2.31
NLE1-206ENST00000589367 BRINP3Q76B58 766 aa29.49■■■□□ 2.31
NLE1-206ENST00000589367 PHLPP1O60346 1717 aa29.46■■■□□ 2.31
NLE1-206ENST00000589367 JCADQ9P266 1359 aa29.46■■■□□ 2.31
NLE1-206ENST00000589367 AHDC1Q5TGY3 1603 aaPredicted RBP29.44■■■□□ 2.3
NLE1-206ENST00000589367 MYOM2P54296 1465 aa29.43■■■□□ 2.3
NLE1-206ENST00000589367 NALCNQ8IZF0 1738 aa29.43■■■□□ 2.3
NLE1-206ENST00000589367 LRPPRCP42704 1394 aaKnown RBP29.43■■■□□ 2.3
NLE1-206ENST00000589367 NRXN1Q9ULB1 1477 aa29.42■■■□□ 2.3
NLE1-206ENST00000589367 COL16A1Q07092 1604 aaPredicted RBP29.42■■■□□ 2.3
NLE1-206ENST00000589367 TECPR2O15040 1411 aa29.42■■■□□ 2.3
NLE1-206ENST00000589367 TMEM132EQ6IEE7 984 aa29.41■■■□□ 2.3
NLE1-206ENST00000589367 C14orf93Q9H972 538 aaKnown RBP29.41■■■□□ 2.3
NLE1-206ENST00000589367 STK26Q9P289 416 aa29.41■■■□□ 2.3
NLE1-206ENST00000589367 ASXL1Q8IXJ9 1541 aa29.4■■■□□ 2.3
NLE1-206ENST00000589367 ABCC11Q96J66 1382 aa29.4■■■□□ 2.3
NLE1-206ENST00000589367 SOCS7O14512 581 aa29.4■■■□□ 2.3
NLE1-206ENST00000589367 C1orf167Q5SNV9 1468 aa29.36■■■□□ 2.29
NLE1-206ENST00000589367 YTHDC2Q9H6S0 1430 aaKnown RBP29.36■■■□□ 2.29
NLE1-206ENST00000589367 CFAP70Q5T0N1 1121 aa29.35■■■□□ 2.29
NLE1-206ENST00000589367 WAPLQ7Z5K2 1190 aa29.33■■■□□ 2.29
NLE1-206ENST00000589367 SPATA31A6Q5VVP1 1343 aa29.33■■■□□ 2.29
NLE1-206ENST00000589367 STAC3Q96MF2 364 aa29.32■■■□□ 2.28
NLE1-206ENST00000589367 DHX57Q6P158 1386 aaKnown RBP29.31■■■□□ 2.28
NLE1-206ENST00000589367 SIRT1Q96EB6 747 aa29.31■■■□□ 2.28
NLE1-206ENST00000589367 RGS17Q9UGC6 210 aaPredicted RBP29.31■■■□□ 2.28
NLE1-206ENST00000589367 DCAF11Q8TEB1 546 aa29.3■■■□□ 2.28
NLE1-206ENST00000589367 LAMC1P11047 1609 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms