RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MYO5BQ9ULV0 1848 aa16.07■□□□□ 0.16
SMAD4-205ENST00000588745 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
SMAD4-205ENST00000588745 IDI1Q13907 227 aa16.06■□□□□ 0.16
SMAD4-205ENST00000588745 IQGAP1P46940 1657 aa16.05■□□□□ 0.16
SMAD4-205ENST00000588745 C3P01024 1663 aa16.04■□□□□ 0.16
SMAD4-205ENST00000588745 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
SMAD4-205ENST00000588745 ADGRF5Q8IZF2 1346 aa16.03■□□□□ 0.16
SMAD4-205ENST00000588745 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
SMAD4-205ENST00000588745 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
SMAD4-205ENST00000588745 TNRQ92752 1358 aa16.01■□□□□ 0.15
SMAD4-205ENST00000588745 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
SMAD4-205ENST00000588745 ZFYVE9O95405 1425 aa16■□□□□ 0.15
SMAD4-205ENST00000588745 A2ML1A8K2U0 1454 aa16■□□□□ 0.15
SMAD4-205ENST00000588745 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
SMAD4-205ENST00000588745 CCDC7Q96M83 1385 aa15.99■□□□□ 0.15
SMAD4-205ENST00000588745 SCAF11Q99590 1463 aaKnown RBP15.98■□□□□ 0.15
SMAD4-205ENST00000588745 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
SMAD4-205ENST00000588745 RIMS1Q86UR5 1692 aaKnown RBP15.97■□□□□ 0.15
SMAD4-205ENST00000588745 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
SMAD4-205ENST00000588745 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
SMAD4-205ENST00000588745 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.15
SMAD4-205ENST00000588745 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
SMAD4-205ENST00000588745 ST20-MTHFSA0A0A6YYL1 179 aa15.96■□□□□ 0.15
SMAD4-205ENST00000588745 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
SMAD4-205ENST00000588745 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
SMAD4-205ENST00000588745 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
SMAD4-205ENST00000588745 STAG3Q9UJ98 1225 aa15.95■□□□□ 0.14
SMAD4-205ENST00000588745 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
SMAD4-205ENST00000588745 EIF3AQ14152 1382 aaKnown RBP15.94■□□□□ 0.14
SMAD4-205ENST00000588745 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
SMAD4-205ENST00000588745 C14orf93Q9H972 538 aaKnown RBP15.93■□□□□ 0.14
SMAD4-205ENST00000588745 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
SMAD4-205ENST00000588745 CEBPAP49715 358 aaPredicted RBP15.91■□□□□ 0.14
SMAD4-205ENST00000588745 MIER1Q8N108 512 aa15.91■□□□□ 0.14
SMAD4-205ENST00000588745 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
SMAD4-205ENST00000588745 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
SMAD4-205ENST00000588745 TESK2Q96S53 571 aa15.88■□□□□ 0.13
SMAD4-205ENST00000588745 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
SMAD4-205ENST00000588745 ALKQ9UM73 1620 aa15.88■□□□□ 0.13
SMAD4-205ENST00000588745 NRXN3Q9Y4C0 1643 aa15.88■□□□□ 0.13
SMAD4-205ENST00000588745 ARHGEF28Q8N1W1 1705 aaKnown RBP15.87■□□□□ 0.13
SMAD4-205ENST00000588745 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
SMAD4-205ENST00000588745 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMAD4-205ENST00000588745 DISP3Q9P2K9 1392 aa15.86■□□□□ 0.13
SMAD4-205ENST00000588745 ZNF142P52746 1687 aaPredicted RBP15.85■□□□□ 0.13
SMAD4-205ENST00000588745 SLIT1O75093 1534 aa15.85■□□□□ 0.13
SMAD4-205ENST00000588745 CEP170BQ9Y4F5 1589 aaPredicted RBP15.85■□□□□ 0.13
SMAD4-205ENST00000588745 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
SMAD4-205ENST00000588745 SBNO2Q9Y2G9 1366 aa15.84■□□□□ 0.13
SMAD4-205ENST00000588745 PTPRMP28827 1452 aa15.83■□□□□ 0.12
SMAD4-205ENST00000588745 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.12
SMAD4-205ENST00000588745 TMF1P82094 1093 aa15.83■□□□□ 0.12
SMAD4-205ENST00000588745 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
SMAD4-205ENST00000588745 HDGFP51858 240 aaKnown RBP15.82■□□□□ 0.12
SMAD4-205ENST00000588745 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
SMAD4-205ENST00000588745 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
SMAD4-205ENST00000588745 YTHDC2Q9H6S0 1430 aaKnown RBP15.81■□□□□ 0.12
SMAD4-205ENST00000588745 CENPJQ9HC77 1338 aaPredicted RBP15.8■□□□□ 0.12
SMAD4-205ENST00000588745 ANP32CO43423 234 aa15.8■□□□□ 0.12
SMAD4-205ENST00000588745 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
SMAD4-205ENST00000588745 TRAK1Q9UPV9 953 aa15.79■□□□□ 0.12
SMAD4-205ENST00000588745 PLEKHG1Q9ULL1 1385 aa15.79■□□□□ 0.12
SMAD4-205ENST00000588745 DLC1Q96QB1 1528 aa15.78■□□□□ 0.12
SMAD4-205ENST00000588745 KNDC1Q76NI1 1749 aa15.78■□□□□ 0.12
SMAD4-205ENST00000588745 MYOM1P52179 1685 aa15.78■□□□□ 0.12
SMAD4-205ENST00000588745 CDCA8Q53HL2 280 aa15.77■□□□□ 0.12
SMAD4-205ENST00000588745 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
SMAD4-205ENST00000588745 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
SMAD4-205ENST00000588745 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
SMAD4-205ENST00000588745 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
SMAD4-205ENST00000588745 SETD1BQ9UPS6 1966 aaKnown RBP15.74■□□□□ 0.11
SMAD4-205ENST00000588745 LTKP29376 864 aa15.74■□□□□ 0.11
SMAD4-205ENST00000588745 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
SMAD4-205ENST00000588745 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
SMAD4-205ENST00000588745 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
SMAD4-205ENST00000588745 CPS1P31327 1500 aa15.73■□□□□ 0.11
SMAD4-205ENST00000588745 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
SMAD4-205ENST00000588745 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
SMAD4-205ENST00000588745 MED14O60244 1454 aa15.72■□□□□ 0.11
SMAD4-205ENST00000588745 METP08581 1390 aa15.72■□□□□ 0.11
SMAD4-205ENST00000588745 CCER2I3L3R5 266 aa15.72■□□□□ 0.11
SMAD4-205ENST00000588745 STK26Q9P289 416 aa15.72■□□□□ 0.11
SMAD4-205ENST00000588745 TECPR2O15040 1411 aa15.71■□□□□ 0.11
SMAD4-205ENST00000588745 ABCC11Q96J66 1382 aa15.71■□□□□ 0.11
SMAD4-205ENST00000588745 BCANQ96GW7 911 aa15.69■□□□□ 0.1
SMAD4-205ENST00000588745 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
SMAD4-205ENST00000588745 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
SMAD4-205ENST00000588745 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
SMAD4-205ENST00000588745 POGKQ9P215 609 aa15.66■□□□□ 0.1
SMAD4-205ENST00000588745 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
SMAD4-205ENST00000588745 PUS7Q96PZ0 661 aaKnown RBP15.65■□□□□ 0.1
SMAD4-205ENST00000588745 PANK3Q9H999 370 aa15.65■□□□□ 0.1
SMAD4-205ENST00000588745 SAFB2Q14151 953 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMAD4-205ENST00000588745 KTN1Q86UP2 1357 aaKnown RBP15.64■□□□□ 0.09
SMAD4-205ENST00000588745 PLEKHH1Q9ULM0 1364 aa15.64■□□□□ 0.09
SMAD4-205ENST00000588745 XRN1Q8IZH2 1706 aaKnown RBP15.64■□□□□ 0.09
SMAD4-205ENST00000588745 PER1O15534 1290 aaPredicted RBP15.63■□□□□ 0.09
SMAD4-205ENST00000588745 SIRT1Q96EB6 747 aa15.63■□□□□ 0.09
SMAD4-205ENST00000588745 TBX22Q9Y458 520 aa15.63■□□□□ 0.09
SMAD4-205ENST00000588745 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms