RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 GABPB1Q06547 395 aaPredicted RBP8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 MYOM3Q5VTT5 1437 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 PANK3Q9H999 370 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 PRDM2Q13029 1718 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 CLSTN1O94985 981 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 MCM5P33992 734 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 NBPF20Q3BBV1 942 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 RAD54L2Q9Y4B4 1467 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 FANCD2Q9BXW9 1451 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 CCNB3Q8WWL7 1395 aa8.09□□□□□ -1.11
AP000547.3-204ENST00000588548 MLECQ14165 292 aa8.08□□□□□ -1.12
AP000547.3-204ENST00000588548 SIRT1Q96EB6 747 aa8.08□□□□□ -1.12
AP000547.3-204ENST00000588548 SETD5Q9C0A6 1442 aa8.08□□□□□ -1.12
AP000547.3-204ENST00000588548 EP400NLQ6ZTU2 488 aa8.08□□□□□ -1.12
AP000547.3-204ENST00000588548 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
AP000547.3-204ENST00000588548 CARMIL1Q5VZK9 1371 aa8.08□□□□□ -1.12
AP000547.3-204ENST00000588548 SPDYE4A6NLX3 237 aa8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 SLFN14P0C7P3 912 aa8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 NASPP49321 788 aaPredicted RBP8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 CALCOCO1Q9P1Z2 691 aa8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 ZKSCAN5Q9Y2L8 839 aa8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 CENPQQ7L2Z9 268 aaPredicted RBP8.07□□□□□ -1.12
AP000547.3-204ENST00000588548 MYCBPQ99417 103 aaPredicted RBP8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 FEZ1Q99689 392 aa8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 FEZ2Q9UHY8 353 aaPredicted RBP8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 MAP3K1Q13233 1512 aa8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 CT47A1Q5JQC4 288 aaPredicted RBP8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 PRIMPOLQ96LW4 560 aa8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 CHMP5Q9NZZ3 219 aa8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 NLRP1Q9C000 1473 aa8.06□□□□□ -1.12
AP000547.3-204ENST00000588548 IRF6O14896 467 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 TRHP20396 242 aaPredicted RBP8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 RBM25P49756 843 aaKnown RBP8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 HSP90AB3PQ58FF7 597 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 NCAPGQ9BPX3 1015 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 CEP83Q9Y592 693 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 SATB1Q01826 763 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 PDLIM2Q96JY6 352 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 OGFRQ9NZT2 677 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 SH3BP1Q9Y3L3 701 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 CFAP65Q6ZU64 1925 aaKnown RBP8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 ABCA5Q8WWZ7 1642 aa8.05□□□□□ -1.12
AP000547.3-204ENST00000588548 NOP2P46087 812 aaKnown RBP8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 MFAP1P55081 439 aaKnown RBP8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 PDCL2Q8N4E4 241 aa8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 JARID2Q92833 1246 aaPredicted RBP8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 TSC1Q92574 1164 aa8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 POLA1P09884 1462 aaPredicted RBP8.04□□□□□ -1.12
AP000547.3-204ENST00000588548 TONSLQ96HA7 1378 aa8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 SKOR2Q2VWA4 1001 aaPredicted RBP8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 CRBNQ96SW2 442 aa8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 SMC4Q9NTJ3 1288 aa8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 TOPBP1Q92547 1522 aa8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 HSP90AB1P08238 724 aaKnown RBP8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 IBTKQ9P2D0 1353 aaPredicted RBP8.03□□□□□ -1.12
AP000547.3-204ENST00000588548 CCDC172P0C7W6 258 aa8.02□□□□□ -1.12
AP000547.3-204ENST00000588548 HSPA5P11021 654 aaKnown RBP8.02□□□□□ -1.12
AP000547.3-204ENST00000588548 U2AF2P26368 475 aaKnown RBP eCLIP8.02□□□□□ -1.12
AP000547.3-204ENST00000588548 GTF2A1P52655 376 aaPredicted RBP8.02□□□□□ -1.12
AP000547.3-204ENST00000588548 KDM5BQ9UGL1 1544 aa8.02□□□□□ -1.13
AP000547.3-204ENST00000588548 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
AP000547.3-204ENST00000588548 POLR1AO95602 1720 aaPredicted RBP8.02□□□□□ -1.13
AP000547.3-204ENST00000588548 NCOA1Q15788 1441 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 SEMA3FQ13275 785 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 TERF2Q15554 542 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 CTR9Q6PD62 1173 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 ANKRD7Q92527 254 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 BCL2L12Q9HB09 334 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 CCDC7Q96M83 1385 aa8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 SPINK5Q9NQ38 1064 aaPredicted RBP8.01□□□□□ -1.13
AP000547.3-204ENST00000588548 URB2Q14146 1524 aaKnown RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 TNNT3P45378 269 aaPredicted RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 RAI14Q9P0K7 980 aa8□□□□□ -1.13
AP000547.3-204ENST00000588548 DNMBPQ6XZF7 1577 aa8□□□□□ -1.13
AP000547.3-204ENST00000588548 DHX16O60231 1041 aaKnown RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 HMGB1P09429 215 aaKnown RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 MAP2K1Q02750 393 aaPredicted RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 C20orf194Q5TEA3 1177 aa8□□□□□ -1.13
AP000547.3-204ENST00000588548 BRMS1Q9HCU9 246 aa8□□□□□ -1.13
AP000547.3-204ENST00000588548 ATP1B4Q9UN42 357 aaPredicted RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 TDRD9Q8NDG6 1382 aaKnown RBP8□□□□□ -1.13
AP000547.3-204ENST00000588548 ERCC6Q03468 1493 aa8□□□□□ -1.13
AP000547.3-204ENST00000588548 GOLIM4O00461 696 aa7.99□□□□□ -1.13
AP000547.3-204ENST00000588548 SEC24BO95487 1268 aa7.99□□□□□ -1.13
AP000547.3-204ENST00000588548 ICE2Q659A1 982 aa7.99□□□□□ -1.13
AP000547.3-204ENST00000588548 UPF2Q9HAU5 1272 aaKnown RBP7.99□□□□□ -1.13
AP000547.3-204ENST00000588548 CCDC39Q9UFE4 941 aa7.99□□□□□ -1.13
AP000547.3-204ENST00000588548 RSPH14Q9UHP6 348 aa7.99□□□□□ -1.13
AP000547.3-204ENST00000588548 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms