RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-215	ENST00000588030	SENP3	Q9H4L4	574 aa	Predicted RBP	29.51	■■■□□ 2.32
CIRBP-215	ENST00000588030	LRRC7	Q96NW7	1537 aa		29.51	■■■□□ 2.31
CIRBP-215	ENST00000588030	BCAN	Q96GW7	911 aa		29.5	■■■□□ 2.31
CIRBP-215	ENST00000588030	MYO5B	Q9ULV0	1848 aa		29.5	■■■□□ 2.31
CIRBP-215	ENST00000588030	TOM1	O60784	492 aa		29.49	■■■□□ 2.31
CIRBP-215	ENST00000588030	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.49	■■■□□ 2.31
CIRBP-215	ENST00000588030	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.49	■■■□□ 2.31
CIRBP-215	ENST00000588030	PPP1R15A	O75807	674 aa	Predicted RBP	29.48	■■■□□ 2.31
CIRBP-215	ENST00000588030	KCNA6	P17658	529 aa		29.48	■■■□□ 2.31
CIRBP-215	ENST00000588030	PLEKHG1	Q9ULL1	1385 aa		29.47	■■■□□ 2.31
CIRBP-215	ENST00000588030	RAB3GAP2	Q9H2M9	1393 aa		29.44	■■■□□ 2.3
CIRBP-215	ENST00000588030	SPHKAP	Q2M3C7	1700 aa		29.44	■■■□□ 2.3
CIRBP-215	ENST00000588030	PIP4K2B	P78356	416 aa		29.43	■■■□□ 2.3
CIRBP-215	ENST00000588030	FOXD1	Q16676	465 aa		29.42	■■■□□ 2.3
CIRBP-215	ENST00000588030	TBX22	Q9Y458	520 aa		29.41	■■■□□ 2.3
CIRBP-215	ENST00000588030	MPHOSPH9	Q99550	1183 aa		29.4	■■■□□ 2.3
CIRBP-215	ENST00000588030	SCAF1	Q9H7N4	1312 aa	Known RBP	29.38	■■■□□ 2.29
CIRBP-215	ENST00000588030	ZNF326	Q5BKZ1	582 aa	Known RBP	29.36	■■■□□ 2.29
CIRBP-215	ENST00000588030	PROSER2	Q86WR7	435 aa	Predicted RBP	29.36	■■■□□ 2.29
CIRBP-215	ENST00000588030	ALK	Q9UM73	1620 aa		29.36	■■■□□ 2.29
CIRBP-215	ENST00000588030	ADAMTS13	Q76LX8	1427 aa		29.35	■■■□□ 2.29
CIRBP-215	ENST00000588030	RBM33	Q96EV2	1170 aa	Known RBP	29.35	■■■□□ 2.29
CIRBP-215	ENST00000588030	TRPM2	O94759	1503 aa		29.34	■■■□□ 2.29
CIRBP-215	ENST00000588030	TMEM94	Q12767	1356 aa		29.34	■■■□□ 2.29
CIRBP-215	ENST00000588030	CLTCL1	P53675	1640 aa		29.33	■■■□□ 2.29
CIRBP-215	ENST00000588030	ACIN1	Q9UKV3	1341 aa	Known RBP	29.32	■■■□□ 2.28
CIRBP-215	ENST00000588030	HSPA1L	P34931	641 aa		29.3	■■■□□ 2.28
CIRBP-215	ENST00000588030	XIRP1	Q702N8	1843 aa	Known RBP	29.28	■■■□□ 2.28
CIRBP-215	ENST00000588030	NWD1	Q149M9	1564 aa		29.27	■■■□□ 2.28
CIRBP-215	ENST00000588030	NKTR	P30414	1462 aa	Known RBP	29.25	■■■□□ 2.27
CIRBP-215	ENST00000588030	CHD2	O14647	1828 aa	Known RBP	29.23	■■■□□ 2.27
CIRBP-215	ENST00000588030	PIK3R4	Q99570	1358 aa		29.23	■■■□□ 2.27
CIRBP-215	ENST00000588030	KIF1B	O60333	1816 aa		29.22	■■■□□ 2.27
CIRBP-215	ENST00000588030	AMOTL2	Q9Y2J4	779 aa		29.2	■■■□□ 2.27
CIRBP-215	ENST00000588030	NEXMIF	Q5QGS0	1516 aa		29.2	■■■□□ 2.26
CIRBP-215	ENST00000588030	CCDC144A	A2RUR9	1427 aa		29.2	■■■□□ 2.26
CIRBP-215	ENST00000588030	HRC	P23327	699 aa		29.2	■■■□□ 2.26
CIRBP-215	ENST00000588030	DIP2A	Q14689	1571 aa		29.19	■■■□□ 2.26
CIRBP-215	ENST00000588030	PTPRU	Q92729	1446 aa		29.19	■■■□□ 2.26
CIRBP-215	ENST00000588030	RPGRIP1L	Q68CZ1	1315 aa		29.18	■■■□□ 2.26
CIRBP-215	ENST00000588030	VGF	O15240	615 aa	Predicted RBP	29.17	■■■□□ 2.26
CIRBP-215	ENST00000588030	SETBP1	Q9Y6X0	1596 aa		29.16	■■■□□ 2.26
CIRBP-215	ENST00000588030	NRXN3	Q9Y4C0	1643 aa		29.16	■■■□□ 2.26
CIRBP-215	ENST00000588030	MET	P08581	1390 aa		29.15	■■■□□ 2.26
CIRBP-215	ENST00000588030	MSH6	P52701	1360 aa		29.13	■■■□□ 2.25
CIRBP-215	ENST00000588030	DISP3	Q9P2K9	1392 aa		29.13	■■■□□ 2.25
CIRBP-215	ENST00000588030	NCOA3	Q9Y6Q9	1424 aa		29.12	■■■□□ 2.25
CIRBP-215	ENST00000588030	FAM135B	Q49AJ0	1406 aa		29.11	■■■□□ 2.25
CIRBP-215	ENST00000588030	RGL3	Q3MIN7	710 aa		29.11	■■■□□ 2.25
CIRBP-215	ENST00000588030	TRIM26	Q12899	539 aa	Predicted RBP	29.1	■■■□□ 2.25
CIRBP-215	ENST00000588030	SLAIN2	Q9P270	581 aa		29.1	■■■□□ 2.25
CIRBP-215	ENST00000588030	C14orf37	Q86TY3	774 aa		29.08	■■■□□ 2.25
CIRBP-215	ENST00000588030	C19orf44	Q9H6X5	657 aa		29.07	■■■□□ 2.24
CIRBP-215	ENST00000588030	SPATA31E1	Q6ZUB1	1445 aa		29.07	■■■□□ 2.24
CIRBP-215	ENST00000588030	ADGRF5	Q8IZF2	1346 aa		29.03	■■■□□ 2.24
CIRBP-215	ENST00000588030	ANKRD30B	Q9BXX2	1392 aa		29.02	■■■□□ 2.24
CIRBP-215	ENST00000588030	CADPS2	Q86UW7	1296 aa		28.99	■■■□□ 2.23
CIRBP-215	ENST00000588030	XRN1	Q8IZH2	1706 aa	Known RBP	28.99	■■■□□ 2.23
CIRBP-215	ENST00000588030	PPL	O60437	1756 aa		28.99	■■■□□ 2.23
CIRBP-215	ENST00000588030	ATF3	P18847	181 aa		28.99	■■■□□ 2.23
CIRBP-215	ENST00000588030	ILDR2	Q71H61	639 aa		28.97	■■■□□ 2.23
CIRBP-215	ENST00000588030	ROBO1	Q9Y6N7	1651 aa		28.94	■■■□□ 2.22
CIRBP-215	ENST00000588030	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.94	■■■□□ 2.22
CIRBP-215	ENST00000588030	SETD1A	O15047	1707 aa	Known RBP	28.92	■■■□□ 2.22
CIRBP-215	ENST00000588030	ROBO2	Q9HCK4	1378 aa		28.9	■■■□□ 2.22
CIRBP-215	ENST00000588030	MED1	Q15648	1581 aa	Predicted RBP	28.87	■■■□□ 2.21
CIRBP-215	ENST00000588030	IFT172	Q9UG01	1749 aa		28.87	■■■□□ 2.21
CIRBP-215	ENST00000588030	DCC	P43146	1447 aa		28.87	■■■□□ 2.21
CIRBP-215	ENST00000588030	PTCH1	Q13635	1447 aa		28.85	■■■□□ 2.21
CIRBP-215	ENST00000588030	TMEM132E	Q6IEE7	984 aa		28.85	■■■□□ 2.21
CIRBP-215	ENST00000588030	ADGRL3	Q9HAR2	1447 aa		28.85	■■■□□ 2.21
CIRBP-215	ENST00000588030	PRAG1	Q86YV5	1406 aa		28.85	■■■□□ 2.21
CIRBP-215	ENST00000588030	BRINP3	Q76B58	766 aa		28.84	■■■□□ 2.21
CIRBP-215	ENST00000588030	PIK3C2G	O75747	1445 aa		28.83	■■■□□ 2.21
CIRBP-215	ENST00000588030	C14orf93	Q9H972	538 aa	Known RBP	28.82	■■■□□ 2.2
CIRBP-215	ENST00000588030	STK26	Q9P289	416 aa		28.82	■■■□□ 2.2
CIRBP-215	ENST00000588030	KDM2A	Q9Y2K7	1162 aa		28.82	■■■□□ 2.2
CIRBP-215	ENST00000588030	MST1R	Q04912	1400 aa		28.81	■■■□□ 2.2
CIRBP-215	ENST00000588030	DCAF11	Q8TEB1	546 aa		28.8	■■■□□ 2.2
CIRBP-215	ENST00000588030	CFAP70	Q5T0N1	1121 aa		28.79	■■■□□ 2.2
CIRBP-215	ENST00000588030	LRPPRC	P42704	1394 aa	Known RBP	28.79	■■■□□ 2.2
CIRBP-215	ENST00000588030	NRXN1	Q9ULB1	1477 aa		28.78	■■■□□ 2.2
CIRBP-215	ENST00000588030	DHX57	Q6P158	1386 aa	Known RBP	28.77	■■■□□ 2.2
CIRBP-215	ENST00000588030	ABCC11	Q96J66	1382 aa		28.77	■■■□□ 2.2
CIRBP-215	ENST00000588030	WAPL	Q7Z5K2	1190 aa		28.77	■■■□□ 2.2
CIRBP-215	ENST00000588030	MYOM2	P54296	1465 aa		28.76	■■■□□ 2.19
CIRBP-215	ENST00000588030	PHLPP1	O60346	1717 aa		28.75	■■■□□ 2.19
CIRBP-215	ENST00000588030	NALCN	Q8IZF0	1738 aa		28.75	■■■□□ 2.19
CIRBP-215	ENST00000588030	PHF23	Q9BUL5	403 aa	Predicted RBP	28.74	■■■□□ 2.19
CIRBP-215	ENST00000588030	PCGF6	Q9BYE7	350 aa		28.74	■■■□□ 2.19
CIRBP-215	ENST00000588030	ASXL1	Q8IXJ9	1541 aa		28.74	■■■□□ 2.19
CIRBP-215	ENST00000588030	TECPR2	O15040	1411 aa		28.73	■■■□□ 2.19
CIRBP-215	ENST00000588030	JCAD	Q9P266	1359 aa		28.73	■■■□□ 2.19
CIRBP-215	ENST00000588030	SIN3A	Q96ST3	1273 aa		28.73	■■■□□ 2.19
CIRBP-215	ENST00000588030	NEUROD1	Q13562	356 aa		28.71	■■■□□ 2.19
CIRBP-215	ENST00000588030	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.71	■■■□□ 2.19
CIRBP-215	ENST00000588030	COL16A1	Q07092	1604 aa	Predicted RBP	28.71	■■■□□ 2.19
CIRBP-215	ENST00000588030	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.71	■■■□□ 2.19
CIRBP-215	ENST00000588030	C1orf167	Q5SNV9	1468 aa		28.71	■■■□□ 2.19
CIRBP-215	ENST00000588030	DDX17	Q92841	729 aa	Known RBP	28.69	■■■□□ 2.18

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