RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
PTPRS-204ENST00000587303 ST18O60284 1047 aa16.83■□□□□ 0.28
PTPRS-204ENST00000587303 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
PTPRS-204ENST00000587303 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.83■□□□□ 0.28
PTPRS-204ENST00000587303 CCDC43Q96MW1 224 aaKnown RBP16.83■□□□□ 0.28
PTPRS-204ENST00000587303 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
PTPRS-204ENST00000587303 PANK3Q9H999 370 aa16.82■□□□□ 0.28
PTPRS-204ENST00000587303 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
PTPRS-204ENST00000587303 NUTM2GQ5VZR2 741 aa16.81■□□□□ 0.28
PTPRS-204ENST00000587303 TPM2P07951 284 aa16.81■□□□□ 0.28
PTPRS-204ENST00000587303 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
PTPRS-204ENST00000587303 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
PTPRS-204ENST00000587303 MCTP1Q6DN14 999 aa16.8■□□□□ 0.28
PTPRS-204ENST00000587303 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
PTPRS-204ENST00000587303 TRIM29Q14134 588 aa16.8■□□□□ 0.28
PTPRS-204ENST00000587303 ANKRD45Q5TZF3 282 aa16.8■□□□□ 0.28
PTPRS-204ENST00000587303 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
PTPRS-204ENST00000587303 PCMTD1Q96MG8 357 aaPredicted RBP16.8■□□□□ 0.28
PTPRS-204ENST00000587303 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
PTPRS-204ENST00000587303 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
PTPRS-204ENST00000587303 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
PTPRS-204ENST00000587303 FYB1O15117 783 aa16.78■□□□□ 0.28
PTPRS-204ENST00000587303 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
PTPRS-204ENST00000587303 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
PTPRS-204ENST00000587303 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
PTPRS-204ENST00000587303 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
PTPRS-204ENST00000587303 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.27
PTPRS-204ENST00000587303 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.27
PTPRS-204ENST00000587303 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.27
PTPRS-204ENST00000587303 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
PTPRS-204ENST00000587303 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
PTPRS-204ENST00000587303 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
PTPRS-204ENST00000587303 DIAPH1O60610 1272 aaKnown RBP16.76■□□□□ 0.27
PTPRS-204ENST00000587303 CCAR1Q8IX12 1150 aaKnown RBP16.76■□□□□ 0.27
PTPRS-204ENST00000587303 WASHC2AQ641Q2 1341 aa16.76■□□□□ 0.27
PTPRS-204ENST00000587303 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
PTPRS-204ENST00000587303 TRDNQ13061 729 aa16.76■□□□□ 0.27
PTPRS-204ENST00000587303 ERICH2A1L162 156 aa16.75■□□□□ 0.27
PTPRS-204ENST00000587303 G3BP1Q13283 466 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTPRS-204ENST00000587303 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
PTPRS-204ENST00000587303 ZNF592Q92610 1267 aa16.75■□□□□ 0.27
PTPRS-204ENST00000587303 FOSBP53539 338 aa16.74■□□□□ 0.27
PTPRS-204ENST00000587303 CPLX1O14810 134 aa16.74■□□□□ 0.27
PTPRS-204ENST00000587303 FKBP5Q13451 457 aaPredicted RBP16.74■□□□□ 0.27
PTPRS-204ENST00000587303 RIC3Q7Z5B4 369 aa16.74■□□□□ 0.27
PTPRS-204ENST00000587303 CCDC47Q96A33 483 aaKnown RBP16.74■□□□□ 0.27
PTPRS-204ENST00000587303 RUFY2Q8WXA3 655 aa16.73■□□□□ 0.27
PTPRS-204ENST00000587303 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
PTPRS-204ENST00000587303 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PTPRS-204ENST00000587303 KIF15Q9NS87 1388 aa16.72■□□□□ 0.27
PTPRS-204ENST00000587303 IKQ13123 557 aaPredicted RBP16.72■□□□□ 0.27
PTPRS-204ENST00000587303 PHF14O94880 888 aa16.72■□□□□ 0.27
PTPRS-204ENST00000587303 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
PTPRS-204ENST00000587303 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.273e-7■■■■■ 275.1
PTPRS-204ENST00000587303 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
PTPRS-204ENST00000587303 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
PTPRS-204ENST00000587303 PROSER2Q86WR7 435 aaPredicted RBP16.71■□□□□ 0.27
PTPRS-204ENST00000587303 TSPYL4Q9UJ04 414 aa16.71■□□□□ 0.27
PTPRS-204ENST00000587303 TPM1P09493 284 aa16.71■□□□□ 0.27
PTPRS-204ENST00000587303 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.26
PTPRS-204ENST00000587303 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.26
PTPRS-204ENST00000587303 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
PTPRS-204ENST00000587303 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
PTPRS-204ENST00000587303 KDM4AO75164 1064 aa16.7■□□□□ 0.26
PTPRS-204ENST00000587303 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
PTPRS-204ENST00000587303 R3HCC1Q9Y3T6 440 aaKnown RBP16.7■□□□□ 0.26
PTPRS-204ENST00000587303 RIPK4P57078 832 aa16.7■□□□□ 0.26
PTPRS-204ENST00000587303 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
PTPRS-204ENST00000587303 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
PTPRS-204ENST00000587303 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
PTPRS-204ENST00000587303 NLRP6P59044 892 aa16.68■□□□□ 0.26
PTPRS-204ENST00000587303 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
PTPRS-204ENST00000587303 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
PTPRS-204ENST00000587303 HMOX1P09601 288 aa16.67■□□□□ 0.26
PTPRS-204ENST00000587303 GPRASP1Q5JY77 1395 aa16.67■□□□□ 0.26
PTPRS-204ENST00000587303 BECN2A8MW95 431 aa16.67■□□□□ 0.26
PTPRS-204ENST00000587303 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
PTPRS-204ENST00000587303 CRBNQ96SW2 442 aa16.66■□□□□ 0.26
PTPRS-204ENST00000587303 E9PSI1 815 aa16.66■□□□□ 0.26
PTPRS-204ENST00000587303 COG6Q9Y2V7 657 aa16.66■□□□□ 0.26
PTPRS-204ENST00000587303 ABTB2Q8N961 1025 aa16.65■□□□□ 0.26
PTPRS-204ENST00000587303 ATP6V1DQ9Y5K8 247 aa16.65■□□□□ 0.26
PTPRS-204ENST00000587303 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
PTPRS-204ENST00000587303 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
PTPRS-204ENST00000587303 TMEM132AQ24JP5 1023 aa16.65■□□□□ 0.26
PTPRS-204ENST00000587303 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
PTPRS-204ENST00000587303 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
PTPRS-204ENST00000587303 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
PTPRS-204ENST00000587303 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
PTPRS-204ENST00000587303 TOP2AP11388 1531 aaKnown RBP16.64■□□□□ 0.25
PTPRS-204ENST00000587303 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
PTPRS-204ENST00000587303 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
PTPRS-204ENST00000587303 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
PTPRS-204ENST00000587303 NAP1L1P55209 391 aaKnown RBP16.63■□□□□ 0.25
PTPRS-204ENST00000587303 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
PTPRS-204ENST00000587303 APAF1O14727 1248 aa16.62■□□□□ 0.25
PTPRS-204ENST00000587303 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
PTPRS-204ENST00000587303 RALYLQ86SE5 291 aaKnown RBP16.61■□□□□ 0.25
PTPRS-204ENST00000587303 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
PTPRS-204ENST00000587303 IPO7O95373 1038 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms