RNA–Protein interactions for RNA: ENST00000587166.5

SSC5D-202, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSC5D, Length 3,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-202ENST00000587166 WDR7Q9Y4E6 1490 aa23■■□□□ 1.27
SSC5D-202ENST00000587166 USP35Q9P2H5 1018 aa23■■□□□ 1.27
SSC5D-202ENST00000587166 LAMC1P11047 1609 aa22.99■■□□□ 1.27
SSC5D-202ENST00000587166 KDM2BQ8NHM5 1336 aa22.98■■□□□ 1.27
SSC5D-202ENST00000587166 MAST1Q9Y2H9 1570 aa22.98■■□□□ 1.27
SSC5D-202ENST00000587166 APAF1O14727 1248 aa22.98■■□□□ 1.27
SSC5D-202ENST00000587166 ATP10AO60312 1499 aa22.96■■□□□ 1.27
SSC5D-202ENST00000587166 SPAG9O60271 1321 aaKnown RBP22.95■■□□□ 1.26
SSC5D-202ENST00000587166 SLFN5Q08AF3 891 aa22.95■■□□□ 1.26
SSC5D-202ENST00000587166 FAM161AQ3B820 660 aa22.94■■□□□ 1.26
SSC5D-202ENST00000587166 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.94■■□□□ 1.26
SSC5D-202ENST00000587166 PLXNC1O60486 1568 aa22.94■■□□□ 1.26
SSC5D-202ENST00000587166 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
SSC5D-202ENST00000587166 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
SSC5D-202ENST00000587166 TRAPPC8Q9Y2L5 1435 aa22.92■■□□□ 1.26
SSC5D-202ENST00000587166 BCAR3O75815 825 aa22.92■■□□□ 1.26
SSC5D-202ENST00000587166 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
SSC5D-202ENST00000587166 PLCH2O75038 1416 aa22.89■■□□□ 1.26
SSC5D-202ENST00000587166 C8orf34Q49A92 452 aa22.88■■□□□ 1.25
SSC5D-202ENST00000587166 CFAP70Q5T0N1 1121 aa22.88■■□□□ 1.25
SSC5D-202ENST00000587166 ASXL1Q8IXJ9 1541 aa22.88■■□□□ 1.25
SSC5D-202ENST00000587166 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
SSC5D-202ENST00000587166 NFKBIBQ15653 356 aa22.87■■□□□ 1.25
SSC5D-202ENST00000587166 EIF3AQ14152 1382 aaKnown RBP22.86■■□□□ 1.25
SSC5D-202ENST00000587166 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
SSC5D-202ENST00000587166 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
SSC5D-202ENST00000587166 KIF3BO15066 747 aa22.84■■□□□ 1.25
SSC5D-202ENST00000587166 PIK3C2GO75747 1445 aa22.84■■□□□ 1.25
SSC5D-202ENST00000587166 E9PSI1 815 aa22.84■■□□□ 1.25
SSC5D-202ENST00000587166 NEUROD2Q15784 382 aa22.84■■□□□ 1.25
SSC5D-202ENST00000587166 MADDQ8WXG6 1647 aa22.84■■□□□ 1.25
SSC5D-202ENST00000587166 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.24
SSC5D-202ENST00000587166 STAC3Q96MF2 364 aa22.83■■□□□ 1.24
SSC5D-202ENST00000587166 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.24
SSC5D-202ENST00000587166 TRMT2AQ8IZ69 625 aaKnown RBP22.81■■□□□ 1.24
SSC5D-202ENST00000587166 NKTRP30414 1462 aaKnown RBP22.8■■□□□ 1.24
SSC5D-202ENST00000587166 SYNMO15061 1565 aa22.8■■□□□ 1.24
SSC5D-202ENST00000587166 KANK1Q14678 1352 aa22.8■■□□□ 1.24
SSC5D-202ENST00000587166 SHROOM2Q13796 1616 aa22.8■■□□□ 1.24
SSC5D-202ENST00000587166 CARD14Q9BXL6 1004 aa22.79■■□□□ 1.24
SSC5D-202ENST00000587166 GSE1Q14687 1217 aa22.79■■□□□ 1.24
SSC5D-202ENST00000587166 FRAT1Q92837 279 aaPredicted RBP22.79■■□□□ 1.24
SSC5D-202ENST00000587166 SCAPERQ9BY12 1400 aa22.79■■□□□ 1.24
SSC5D-202ENST00000587166 CHGAP10645 457 aaKnown RBP22.79■■□□□ 1.24
SSC5D-202ENST00000587166 IGHDP01880 384 aa22.78■■□□□ 1.24
SSC5D-202ENST00000587166 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
SSC5D-202ENST00000587166 IQGAP1P46940 1657 aa22.78■■□□□ 1.24
SSC5D-202ENST00000587166 COG6Q9Y2V7 657 aa22.77■■□□□ 1.24
SSC5D-202ENST00000587166 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
SSC5D-202ENST00000587166 NPC1L1Q9UHC9 1359 aa22.77■■□□□ 1.24
SSC5D-202ENST00000587166 TRPM2O94759 1503 aa22.76■■□□□ 1.23
SSC5D-202ENST00000587166 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
SSC5D-202ENST00000587166 RRP7AQ9Y3A4 280 aaKnown RBP22.76■■□□□ 1.23
SSC5D-202ENST00000587166 ABCC1P33527 1531 aa22.76■■□□□ 1.23
SSC5D-202ENST00000587166 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
SSC5D-202ENST00000587166 PTPRTO14522 1441 aa22.74■■□□□ 1.23
SSC5D-202ENST00000587166 CLTCL1P53675 1640 aa22.73■■□□□ 1.23
SSC5D-202ENST00000587166 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
SSC5D-202ENST00000587166 WWC1Q8IX03 1113 aa22.73■■□□□ 1.23
SSC5D-202ENST00000587166 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
SSC5D-202ENST00000587166 MORC1Q86VD1 984 aa22.72■■□□□ 1.23
SSC5D-202ENST00000587166 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
SSC5D-202ENST00000587166 FRAT2O75474 233 aaPredicted RBP22.71■■□□□ 1.23
SSC5D-202ENST00000587166 CLUAP1Q96AJ1 413 aa22.71■■□□□ 1.23
SSC5D-202ENST00000587166 BRPF3Q9ULD4 1205 aa22.71■■□□□ 1.23
SSC5D-202ENST00000587166 TRAK1Q9UPV9 953 aa22.7■■□□□ 1.22
SSC5D-202ENST00000587166 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
SSC5D-202ENST00000587166 SPHKAPQ2M3C7 1700 aa22.7■■□□□ 1.22
SSC5D-202ENST00000587166 PDE3AQ14432 1141 aa22.69■■□□□ 1.22
SSC5D-202ENST00000587166 RTEL1-TNFRSF6BF6WH68 1400 aa22.68■■□□□ 1.22
SSC5D-202ENST00000587166 ERVK-7P63135 1459 aa22.68■■□□□ 1.22
SSC5D-202ENST00000587166 BCL2L13Q9BXK5 485 aa22.68■■□□□ 1.22
SSC5D-202ENST00000587166 KDM5AP29375 1690 aaKnown RBP22.67■■□□□ 1.22
SSC5D-202ENST00000587166 NGEFQ8N5V2 710 aa22.67■■□□□ 1.22
SSC5D-202ENST00000587166 SLC12A5Q9H2X9 1139 aa22.67■■□□□ 1.22
SSC5D-202ENST00000587166 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
SSC5D-202ENST00000587166 MYOM1P52179 1685 aa22.66■■□□□ 1.22
SSC5D-202ENST00000587166 ZFYVE16Q7Z3T8 1539 aa22.66■■□□□ 1.22
SSC5D-202ENST00000587166 CEP152O94986 1710 aa22.65■■□□□ 1.22
SSC5D-202ENST00000587166 SEC24BO95487 1268 aa22.64■■□□□ 1.22
SSC5D-202ENST00000587166 TCP11L2Q8N4U5 519 aa22.64■■□□□ 1.22
SSC5D-202ENST00000587166 RUNDC1Q96C34 613 aa22.62■■□□□ 1.21
SSC5D-202ENST00000587166 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
SSC5D-202ENST00000587166 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
SSC5D-202ENST00000587166 EIF5BO60841 1220 aaKnown RBP22.61■■□□□ 1.21
SSC5D-202ENST00000587166 NPM1P06748 294 aaKnown RBP eCLIP22.61■■□□□ 1.21
SSC5D-202ENST00000587166 TMEM132EQ6IEE7 984 aa22.61■■□□□ 1.21
SSC5D-202ENST00000587166 POLR3AO14802 1390 aaPredicted RBP22.61■■□□□ 1.21
SSC5D-202ENST00000587166 TNNQ9UQP3 1299 aa22.61■■□□□ 1.21
SSC5D-202ENST00000587166 RARSP54136 660 aaKnown RBP22.6■■□□□ 1.21
SSC5D-202ENST00000587166 FANCAO15360 1455 aa22.6■■□□□ 1.21
SSC5D-202ENST00000587166 GGT6Q6P531 493 aa22.6■■□□□ 1.21
SSC5D-202ENST00000587166 SLKQ9H2G2 1235 aaPredicted RBP22.6■■□□□ 1.21
SSC5D-202ENST00000587166 TET3O43151 1660 aa22.59■■□□□ 1.21
SSC5D-202ENST00000587166 MTHFSP49914 203 aa22.59■■□□□ 1.21
SSC5D-202ENST00000587166 USP19O94966 1318 aa22.58■■□□□ 1.21
SSC5D-202ENST00000587166 ATP7AQ04656 1500 aa22.58■■□□□ 1.2
SSC5D-202ENST00000587166 RLBP1P12271 317 aa22.57■■□□□ 1.2
SSC5D-202ENST00000587166 BECN1Q14457 450 aa22.57■■□□□ 1.2
SSC5D-202ENST00000587166 PMFBP1Q8TBY8 1022 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms