RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
SMARCD2-211ENST00000584483 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
SMARCD2-211ENST00000584483 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
SMARCD2-211ENST00000584483 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
SMARCD2-211ENST00000584483 STAC3Q96MF2 364 aa20.43■□□□□ 0.86
SMARCD2-211ENST00000584483 MYO3AQ8NEV4 1616 aa20.42■□□□□ 0.86
SMARCD2-211ENST00000584483 NBPF1Q3BBV0 1214 aa20.41■□□□□ 0.86
SMARCD2-211ENST00000584483 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
SMARCD2-211ENST00000584483 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
SMARCD2-211ENST00000584483 RIMS2Q9UQ26 1411 aa20.37■□□□□ 0.85
SMARCD2-211ENST00000584483 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
SMARCD2-211ENST00000584483 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
SMARCD2-211ENST00000584483 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
SMARCD2-211ENST00000584483 ZNF316A6NFI3 1004 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-211ENST00000584483 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
SMARCD2-211ENST00000584483 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-211ENST00000584483 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
SMARCD2-211ENST00000584483 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
SMARCD2-211ENST00000584483 VGFO15240 615 aaPredicted RBP20.35■□□□□ 0.85
SMARCD2-211ENST00000584483 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
SMARCD2-211ENST00000584483 ZNF142P52746 1687 aaPredicted RBP20.34■□□□□ 0.85
SMARCD2-211ENST00000584483 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
SMARCD2-211ENST00000584483 ROCK2O75116 1388 aaKnown RBP20.33■□□□□ 0.84
SMARCD2-211ENST00000584483 LAMC1P11047 1609 aa20.32■□□□□ 0.84
SMARCD2-211ENST00000584483 CARD11Q9BXL7 1154 aa20.32■□□□□ 0.84
SMARCD2-211ENST00000584483 SENP3Q9H4L4 574 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-211ENST00000584483 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
SMARCD2-211ENST00000584483 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
SMARCD2-211ENST00000584483 LTKP29376 864 aa20.31■□□□□ 0.84
SMARCD2-211ENST00000584483 SLIT1O75093 1534 aa20.31■□□□□ 0.84
SMARCD2-211ENST00000584483 EIF4G2P78344 907 aaKnown RBP eCLIP20.29■□□□□ 0.84
SMARCD2-211ENST00000584483 NRXN3Q9Y4C0 1643 aa20.28■□□□□ 0.84
SMARCD2-211ENST00000584483 ADGRB1O14514 1584 aa20.28■□□□□ 0.84
SMARCD2-211ENST00000584483 IQGAP1P46940 1657 aa20.27■□□□□ 0.84
SMARCD2-211ENST00000584483 USP47Q96K76 1375 aa20.27■□□□□ 0.84
SMARCD2-211ENST00000584483 THEMISQ8N1K5 641 aaPredicted RBP20.27■□□□□ 0.84
SMARCD2-211ENST00000584483 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMARCD2-211ENST00000584483 SETD1AO15047 1707 aaKnown RBP20.27■□□□□ 0.83
SMARCD2-211ENST00000584483 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.83
SMARCD2-211ENST00000584483 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
SMARCD2-211ENST00000584483 ALKQ9UM73 1620 aa20.26■□□□□ 0.83
SMARCD2-211ENST00000584483 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
SMARCD2-211ENST00000584483 TXNDC2Q86VQ3 553 aa20.24■□□□□ 0.83
SMARCD2-211ENST00000584483 C11orf95C9JLR9 678 aaPredicted RBP20.22■□□□□ 0.83
SMARCD2-211ENST00000584483 ST20-MTHFSA0A0A6YYL1 179 aa20.21■□□□□ 0.83
SMARCD2-211ENST00000584483 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
SMARCD2-211ENST00000584483 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
SMARCD2-211ENST00000584483 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
SMARCD2-211ENST00000584483 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
SMARCD2-211ENST00000584483 MED14O60244 1454 aa20.18■□□□□ 0.82
SMARCD2-211ENST00000584483 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
SMARCD2-211ENST00000584483 METP08581 1390 aa20.16■□□□□ 0.82
SMARCD2-211ENST00000584483 TESK2Q96S53 571 aa20.15■□□□□ 0.82
SMARCD2-211ENST00000584483 TRAK1Q9UPV9 953 aa20.14■□□□□ 0.81
SMARCD2-211ENST00000584483 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-211ENST00000584483 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
SMARCD2-211ENST00000584483 ANKLE2Q86XL3 938 aa20.13■□□□□ 0.81
SMARCD2-211ENST00000584483 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
SMARCD2-211ENST00000584483 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
SMARCD2-211ENST00000584483 POLR1AO95602 1720 aaPredicted RBP20.12■□□□□ 0.81
SMARCD2-211ENST00000584483 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
SMARCD2-211ENST00000584483 STK26Q9P289 416 aa20.11■□□□□ 0.81
SMARCD2-211ENST00000584483 NCKAP5LQ9HCH0 1330 aa20.1■□□□□ 0.81
SMARCD2-211ENST00000584483 BCANQ96GW7 911 aa20.1■□□□□ 0.81
SMARCD2-211ENST00000584483 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
SMARCD2-211ENST00000584483 HSPA2P54652 639 aa20.09■□□□□ 0.81
SMARCD2-211ENST00000584483 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
SMARCD2-211ENST00000584483 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.81
SMARCD2-211ENST00000584483 CCDC7Q96M83 1385 aa20.08■□□□□ 0.81
SMARCD2-211ENST00000584483 KIF7Q2M1P5 1343 aa20.08■□□□□ 0.81
SMARCD2-211ENST00000584483 DISP3Q9P2K9 1392 aa20.07■□□□□ 0.8
SMARCD2-211ENST00000584483 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
SMARCD2-211ENST00000584483 QRICH2Q9H0J4 1663 aa20.06■□□□□ 0.8
SMARCD2-211ENST00000584483 ABCC11Q96J66 1382 aa20.06■□□□□ 0.8
SMARCD2-211ENST00000584483 KNDC1Q76NI1 1749 aa20.05■□□□□ 0.8
SMARCD2-211ENST00000584483 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
SMARCD2-211ENST00000584483 DLC1Q96QB1 1528 aa20.05■□□□□ 0.8
SMARCD2-211ENST00000584483 EIF3AQ14152 1382 aaKnown RBP20.05■□□□□ 0.8
SMARCD2-211ENST00000584483 CENPJQ9HC77 1338 aaPredicted RBP20.04■□□□□ 0.8
SMARCD2-211ENST00000584483 DDX10Q13206 875 aaKnown RBP20.03■□□□□ 0.8
SMARCD2-211ENST00000584483 TECPR2O15040 1411 aa20.02■□□□□ 0.8
SMARCD2-211ENST00000584483 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
SMARCD2-211ENST00000584483 STRCQ7RTU9 1775 aa20.02■□□□□ 0.8
SMARCD2-211ENST00000584483 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
SMARCD2-211ENST00000584483 WAPLQ7Z5K2 1190 aa20.01■□□□□ 0.79
SMARCD2-211ENST00000584483 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
SMARCD2-211ENST00000584483 CPS1P31327 1500 aa20.01■□□□□ 0.79
SMARCD2-211ENST00000584483 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
SMARCD2-211ENST00000584483 SBNO2Q9Y2G9 1366 aa20■□□□□ 0.79
SMARCD2-211ENST00000584483 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
SMARCD2-211ENST00000584483 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
SMARCD2-211ENST00000584483 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
SMARCD2-211ENST00000584483 TMF1P82094 1093 aa19.98■□□□□ 0.79
SMARCD2-211ENST00000584483 SIRT1Q96EB6 747 aa19.98■□□□□ 0.79
SMARCD2-211ENST00000584483 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
SMARCD2-211ENST00000584483 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
SMARCD2-211ENST00000584483 FAM135BQ49AJ0 1406 aa19.96■□□□□ 0.79
SMARCD2-211ENST00000584483 PIK3R4Q99570 1358 aa19.95■□□□□ 0.79
SMARCD2-211ENST00000584483 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
SMARCD2-211ENST00000584483 POGKQ9P215 609 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms