RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
RNF43-208ENST00000584437 KIF3BO15066 747 aa15.9■□□□□ 0.14
RNF43-208ENST00000584437 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
RNF43-208ENST00000584437 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
RNF43-208ENST00000584437 HOOK1Q9UJC3 728 aaKnown RBP15.9■□□□□ 0.14
RNF43-208ENST00000584437 AKAP17AQ02040 695 aaKnown RBP15.9■□□□□ 0.14
RNF43-208ENST00000584437 BICD2Q8TD16 824 aa15.9■□□□□ 0.14
RNF43-208ENST00000584437 SASS6Q6UVJ0 657 aa15.89■□□□□ 0.13
RNF43-208ENST00000584437 FHOD3Q2V2M9 1422 aa15.89■□□□□ 0.13
RNF43-208ENST00000584437 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
RNF43-208ENST00000584437 MARCH6O60337 910 aa15.88■□□□□ 0.13
RNF43-208ENST00000584437 RNF20Q5VTR2 975 aa15.88■□□□□ 0.13
RNF43-208ENST00000584437 SYNE3Q6ZMZ3 975 aa15.88■□□□□ 0.13
RNF43-208ENST00000584437 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
RNF43-208ENST00000584437 MNS1Q8NEH6 495 aa15.87■□□□□ 0.13
RNF43-208ENST00000584437 SMC3Q9UQE7 1217 aa15.87■□□□□ 0.13
RNF43-208ENST00000584437 R3HCC1Q9Y3T6 440 aaKnown RBP15.87■□□□□ 0.13
RNF43-208ENST00000584437 TRIM29Q14134 588 aa15.87■□□□□ 0.13
RNF43-208ENST00000584437 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
RNF43-208ENST00000584437 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■□□ 19.1
RNF43-208ENST00000584437 ANO2Q9NQ90 1003 aa15.86■□□□□ 0.13
RNF43-208ENST00000584437 TRAK1Q9UPV9 953 aa15.86■□□□□ 0.13
RNF43-208ENST00000584437 CNTLNQ9NXG0 1405 aa15.86■□□□□ 0.13
RNF43-208ENST00000584437 CCDC47Q96A33 483 aaKnown RBP15.86■□□□□ 0.13
RNF43-208ENST00000584437 CCDC7Q96M83 1385 aa15.85■□□□□ 0.13
RNF43-208ENST00000584437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.134e-7■■□□□ 13.6
RNF43-208ENST00000584437 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
RNF43-208ENST00000584437 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
RNF43-208ENST00000584437 TRAK2O60296 914 aa15.85■□□□□ 0.13
RNF43-208ENST00000584437 PDE4CQ08493 712 aa15.85■□□□□ 0.13
RNF43-208ENST00000584437 CDR1P51861 262 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 HMGN5P82970 282 aaKnown RBP15.84■□□□□ 0.13
RNF43-208ENST00000584437 LETM1O95202 739 aaPredicted RBP15.84■□□□□ 0.13
RNF43-208ENST00000584437 MBD3O95983 291 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 CCDC73Q6ZRK6 1079 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 CCDC66A2RUB6 948 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
RNF43-208ENST00000584437 RUNDC1Q96C34 613 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 AK7Q96M32 723 aa15.84■□□□□ 0.13
RNF43-208ENST00000584437 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
RNF43-208ENST00000584437 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.12
RNF43-208ENST00000584437 CPLX1O14810 134 aa15.83■□□□□ 0.12
RNF43-208ENST00000584437 CDC45O75419 566 aa15.82■□□□□ 0.12
RNF43-208ENST00000584437 CWC15Q9P013 229 aaKnown RBP15.82■□□□□ 0.12
RNF43-208ENST00000584437 CCDC173Q0VFZ6 552 aa15.82■□□□□ 0.12
RNF43-208ENST00000584437 COG3Q96JB2 828 aa15.82■□□□□ 0.12
RNF43-208ENST00000584437 IFIT2P09913 472 aaKnown RBP15.82■□□□□ 0.12
RNF43-208ENST00000584437 RUFY1Q96T51 708 aa15.81■□□□□ 0.12
RNF43-208ENST00000584437 BRD4O60885 1362 aaPredicted RBP15.81■□□□□ 0.12
RNF43-208ENST00000584437 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
RNF43-208ENST00000584437 HSP90AB4PQ58FF6 505 aa15.81■□□□□ 0.12
RNF43-208ENST00000584437 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
RNF43-208ENST00000584437 NEXNQ0ZGT2 675 aa15.81■□□□□ 0.12
RNF43-208ENST00000584437 DIAPH1O60610 1272 aaKnown RBP15.8■□□□□ 0.12
RNF43-208ENST00000584437 PCMTD1Q96MG8 357 aaPredicted RBP15.8■□□□□ 0.12
RNF43-208ENST00000584437 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
RNF43-208ENST00000584437 FRAT2O75474 233 aaPredicted RBP15.8■□□□□ 0.12
RNF43-208ENST00000584437 LNPKQ9C0E8 428 aa15.8■□□□□ 0.12
RNF43-208ENST00000584437 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
RNF43-208ENST00000584437 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
RNF43-208ENST00000584437 RIPK4P57078 832 aa15.79■□□□□ 0.12
RNF43-208ENST00000584437 C9orf78Q9NZ63 289 aaPredicted RBP15.78■□□□□ 0.12
RNF43-208ENST00000584437 BRPF3Q9ULD4 1205 aa15.78■□□□□ 0.12
RNF43-208ENST00000584437 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.78■□□□□ 0.12
RNF43-208ENST00000584437 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
RNF43-208ENST00000584437 ERC2O15083 957 aa15.78■□□□□ 0.12
RNF43-208ENST00000584437 VGFO15240 615 aaPredicted RBP15.77■□□□□ 0.12
RNF43-208ENST00000584437 GNAI1P63096 354 aa15.77■□□□□ 0.12
RNF43-208ENST00000584437 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.12
RNF43-208ENST00000584437 MCM2P49736 904 aa15.77■□□□□ 0.12
RNF43-208ENST00000584437 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
RNF43-208ENST00000584437 TRDNQ13061 729 aa15.77■□□□□ 0.11
RNF43-208ENST00000584437 CALRP27797 417 aaKnown RBP15.77■□□□□ 0.11
RNF43-208ENST00000584437 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.11
RNF43-208ENST00000584437 TEFQ10587 303 aa15.76■□□□□ 0.11
RNF43-208ENST00000584437 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
RNF43-208ENST00000584437 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
RNF43-208ENST00000584437 VPS53Q5VIR6 699 aa15.76■□□□□ 0.11
RNF43-208ENST00000584437 C1orf141Q5JVX7 400 aa15.76■□□□□ 0.11
RNF43-208ENST00000584437 PKNOX2Q96KN3 472 aa15.75■□□□□ 0.11
RNF43-208ENST00000584437 TSPY26PQ9H489 355 aa15.75■□□□□ 0.11
RNF43-208ENST00000584437 CCP110O43303 1012 aa15.75■□□□□ 0.11
RNF43-208ENST00000584437 PATL2C9JE40 543 aaKnown RBP15.75■□□□□ 0.11
RNF43-208ENST00000584437 G3BP1Q13283 466 aaKnown RBP eCLIP15.74■□□□□ 0.11
RNF43-208ENST00000584437 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
RNF43-208ENST00000584437 RNF214Q8ND24 703 aa15.74■□□□□ 0.11
RNF43-208ENST00000584437 DDX58O95786 925 aaKnown RBP15.73■□□□□ 0.11
RNF43-208ENST00000584437 RABEP1Q15276 862 aa15.73■□□□□ 0.11
RNF43-208ENST00000584437 PRM3Q9NNZ6 103 aa15.73■□□□□ 0.11
RNF43-208ENST00000584437 SAFBQ15424 915 aaKnown RBP eCLIP15.73■□□□□ 0.11
RNF43-208ENST00000584437 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
RNF43-208ENST00000584437 PANK1Q8TE04 598 aa15.73■□□□□ 0.11
RNF43-208ENST00000584437 DHX8Q14562 1220 aaKnown RBP15.73■□□□□ 0.11
RNF43-208ENST00000584437 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
RNF43-208ENST00000584437 NUTM2DQ5VT03 806 aaPredicted RBP15.72■□□□□ 0.11
RNF43-208ENST00000584437 CCDC9Q9Y3X0 531 aaKnown RBP15.72■□□□□ 0.11
RNF43-208ENST00000584437 PSMA5P28066 241 aa15.72■□□□□ 0.11
RNF43-208ENST00000584437 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
RNF43-208ENST00000584437 TRIM5Q9C035 493 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms