RNA–Protein interactions for RNA: ENST00000584103.5

ACADVL-238, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 4

Gene ACADVL, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-238	ENST00000584103	PPP1R15A	O75807	674 aa	Predicted RBP	32.79	■■■□□ 2.84
ACADVL-238	ENST00000584103	PLEKHG1	Q9ULL1	1385 aa		32.79	■■■□□ 2.84
ACADVL-238	ENST00000584103	LRRC7	Q96NW7	1537 aa		32.78	■■■□□ 2.84
ACADVL-238	ENST00000584103	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.77	■■■□□ 2.84
ACADVL-238	ENST00000584103	CLTCL1	P53675	1640 aa		32.76	■■■□□ 2.83
ACADVL-238	ENST00000584103	BCAN	Q96GW7	911 aa		32.74	■■■□□ 2.83
ACADVL-238	ENST00000584103	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.74	■■■□□ 2.83
ACADVL-238	ENST00000584103	SLC26A8	Q96RN1	970 aa		32.73	■■■□□ 2.83
ACADVL-238	ENST00000584103	NWD1	Q149M9	1564 aa		32.7	■■■□□ 2.82
ACADVL-238	ENST00000584103	KIF1B	O60333	1816 aa		32.7	■■■□□ 2.82
ACADVL-238	ENST00000584103	TOM1	O60784	492 aa		32.69	■■■□□ 2.82
ACADVL-238	ENST00000584103	DIP2A	Q14689	1571 aa		32.67	■■■□□ 2.82
ACADVL-238	ENST00000584103	KCNA6	P17658	529 aa		32.66	■■■□□ 2.82
ACADVL-238	ENST00000584103	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.65	■■■□□ 2.82
ACADVL-238	ENST00000584103	ACIN1	Q9UKV3	1341 aa	Known RBP	32.65	■■■□□ 2.82
ACADVL-238	ENST00000584103	SETD5	Q9C0A6	1442 aa		32.65	■■■□□ 2.82
ACADVL-238	ENST00000584103	NKTR	P30414	1462 aa	Known RBP	32.65	■■■□□ 2.82
ACADVL-238	ENST00000584103	XIRP1	Q702N8	1843 aa	Known RBP	32.65	■■■□□ 2.82
ACADVL-238	ENST00000584103	SENP3	Q9H4L4	574 aa	Predicted RBP	32.64	■■■□□ 2.82
ACADVL-238	ENST00000584103	ZNF326	Q5BKZ1	582 aa	Known RBP	32.63	■■■□□ 2.81
ACADVL-238	ENST00000584103	CHD2	O14647	1828 aa	Known RBP	32.61	■■■□□ 2.81
ACADVL-238	ENST00000584103	ADAMTS13	Q76LX8	1427 aa		32.6	■■■□□ 2.81
ACADVL-238	ENST00000584103	ALK	Q9UM73	1620 aa		32.6	■■■□□ 2.81
ACADVL-238	ENST00000584103	TBX22	Q9Y458	520 aa		32.6	■■■□□ 2.81
ACADVL-238	ENST00000584103	SCAF1	Q9H7N4	1312 aa	Known RBP	32.59	■■■□□ 2.81
ACADVL-238	ENST00000584103	NEXMIF	Q5QGS0	1516 aa		32.58	■■■□□ 2.81
ACADVL-238	ENST00000584103	PIP4K2B	P78356	416 aa		32.57	■■■□□ 2.8
ACADVL-238	ENST00000584103	MPHOSPH9	Q99550	1183 aa		32.56	■■■□□ 2.8
ACADVL-238	ENST00000584103	SETBP1	Q9Y6X0	1596 aa		32.56	■■■□□ 2.8
ACADVL-238	ENST00000584103	TMEM94	Q12767	1356 aa		32.56	■■■□□ 2.8
ACADVL-238	ENST00000584103	NRXN3	Q9Y4C0	1643 aa		32.55	■■■□□ 2.8
ACADVL-238	ENST00000584103	PIK3R4	Q99570	1358 aa		32.54	■■■□□ 2.8
ACADVL-238	ENST00000584103	PROSER2	Q86WR7	435 aa	Predicted RBP	32.53	■■■□□ 2.8
ACADVL-238	ENST00000584103	RAB3GAP2	Q9H2M9	1393 aa		32.53	■■■□□ 2.8
ACADVL-238	ENST00000584103	FOXD1	Q16676	465 aa		32.52	■■■□□ 2.8
ACADVL-238	ENST00000584103	CCDC144A	A2RUR9	1427 aa		32.5	■■■□□ 2.79
ACADVL-238	ENST00000584103	PPL	O60437	1756 aa		32.44	■■■□□ 2.78
ACADVL-238	ENST00000584103	RPGRIP1L	Q68CZ1	1315 aa		32.44	■■■□□ 2.78
ACADVL-238	ENST00000584103	RBM33	Q96EV2	1170 aa	Known RBP	32.42	■■■□□ 2.78
ACADVL-238	ENST00000584103	MSH6	P52701	1360 aa		32.41	■■■□□ 2.78
ACADVL-238	ENST00000584103	VGF	O15240	615 aa	Predicted RBP	32.4	■■■□□ 2.78
ACADVL-238	ENST00000584103	HSPA1L	P34931	641 aa		32.4	■■■□□ 2.78
ACADVL-238	ENST00000584103	PTPRU	Q92729	1446 aa		32.4	■■■□□ 2.78
ACADVL-238	ENST00000584103	NCOA3	Q9Y6Q9	1424 aa		32.4	■■■□□ 2.78
ACADVL-238	ENST00000584103	XRN1	Q8IZH2	1706 aa	Known RBP	32.4	■■■□□ 2.78
ACADVL-238	ENST00000584103	AMOTL2	Q9Y2J4	779 aa		32.37	■■■□□ 2.77
ACADVL-238	ENST00000584103	SPATA31E1	Q6ZUB1	1445 aa		32.35	■■■□□ 2.77
ACADVL-238	ENST00000584103	MET	P08581	1390 aa		32.34	■■■□□ 2.77
ACADVL-238	ENST00000584103	SETD1A	O15047	1707 aa	Known RBP	32.33	■■■□□ 2.77
ACADVL-238	ENST00000584103	IFT172	Q9UG01	1749 aa		32.32	■■■□□ 2.76
ACADVL-238	ENST00000584103	HRC	P23327	699 aa		32.31	■■■□□ 2.76
ACADVL-238	ENST00000584103	FAM135B	Q49AJ0	1406 aa		32.31	■■■□□ 2.76
ACADVL-238	ENST00000584103	C14orf37	Q86TY3	774 aa		32.3	■■■□□ 2.76
ACADVL-238	ENST00000584103	ROBO1	Q9Y6N7	1651 aa		32.28	■■■□□ 2.76
ACADVL-238	ENST00000584103	RGL3	Q3MIN7	710 aa		32.27	■■■□□ 2.76
ACADVL-238	ENST00000584103	ANKRD30B	Q9BXX2	1392 aa		32.27	■■■□□ 2.76
ACADVL-238	ENST00000584103	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.26	■■■□□ 2.76
ACADVL-238	ENST00000584103	DISP3	Q9P2K9	1392 aa		32.25	■■■□□ 2.75
ACADVL-238	ENST00000584103	C19orf44	Q9H6X5	657 aa		32.22	■■■□□ 2.75
ACADVL-238	ENST00000584103	PTCH1	Q13635	1447 aa		32.2	■■■□□ 2.75
ACADVL-238	ENST00000584103	SLAIN2	Q9P270	581 aa		32.2	■■■□□ 2.75
ACADVL-238	ENST00000584103	ADGRF5	Q8IZF2	1346 aa		32.2	■■■□□ 2.74
ACADVL-238	ENST00000584103	DCC	P43146	1447 aa		32.19	■■■□□ 2.74
ACADVL-238	ENST00000584103	CADPS2	Q86UW7	1296 aa		32.19	■■■□□ 2.74
ACADVL-238	ENST00000584103	ATF3	P18847	181 aa		32.18	■■■□□ 2.74
ACADVL-238	ENST00000584103	PRAG1	Q86YV5	1406 aa		32.17	■■■□□ 2.74
ACADVL-238	ENST00000584103	PIK3C2G	O75747	1445 aa		32.15	■■■□□ 2.74
ACADVL-238	ENST00000584103	MED1	Q15648	1581 aa	Predicted RBP	32.15	■■■□□ 2.74
ACADVL-238	ENST00000584103	ADGRL3	Q9HAR2	1447 aa		32.14	■■■□□ 2.74
ACADVL-238	ENST00000584103	NALCN	Q8IZF0	1738 aa		32.14	■■■□□ 2.74
ACADVL-238	ENST00000584103	MYOM2	P54296	1465 aa		32.13	■■■□□ 2.73
ACADVL-238	ENST00000584103	PHLPP1	O60346	1717 aa		32.09	■■■□□ 2.73
ACADVL-238	ENST00000584103	ROBO2	Q9HCK4	1378 aa		32.09	■■■□□ 2.73
ACADVL-238	ENST00000584103	NRXN1	Q9ULB1	1477 aa		32.09	■■■□□ 2.73
ACADVL-238	ENST00000584103	LAMC1	P11047	1609 aa		32.07	■■■□□ 2.72
ACADVL-238	ENST00000584103	ASXL1	Q8IXJ9	1541 aa		32.05	■■■□□ 2.72
ACADVL-238	ENST00000584103	KNDC1	Q76NI1	1749 aa		32.04	■■■□□ 2.72
ACADVL-238	ENST00000584103	MST1R	Q04912	1400 aa		32.04	■■■□□ 2.72
ACADVL-238	ENST00000584103	TECPR2	O15040	1411 aa		32.02	■■■□□ 2.72
ACADVL-238	ENST00000584103	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.02	■■■□□ 2.72
ACADVL-238	ENST00000584103	LRPPRC	P42704	1394 aa	Known RBP	32.01	■■■□□ 2.71
ACADVL-238	ENST00000584103	COL16A1	Q07092	1604 aa	Predicted RBP	32	■■■□□ 2.71
ACADVL-238	ENST00000584103	C14orf93	Q9H972	538 aa	Known RBP	31.97	■■■□□ 2.71
ACADVL-238	ENST00000584103	ABCC11	Q96J66	1382 aa		31.96	■■■□□ 2.71
ACADVL-238	ENST00000584103	BRINP3	Q76B58	766 aa		31.96	■■■□□ 2.71
ACADVL-238	ENST00000584103	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.96	■■■□□ 2.71
ACADVL-238	ENST00000584103	TMEM132E	Q6IEE7	984 aa		31.95	■■■□□ 2.71
ACADVL-238	ENST00000584103	STK26	Q9P289	416 aa		31.95	■■■□□ 2.71
ACADVL-238	ENST00000584103	CDC42BPG	Q6DT37	1551 aa		31.93	■■■□□ 2.7
ACADVL-238	ENST00000584103	JCAD	Q9P266	1359 aa		31.92	■■■□□ 2.7
ACADVL-238	ENST00000584103	NHSL1	Q5SYE7	1610 aa		31.91	■■■□□ 2.7
ACADVL-238	ENST00000584103	CFAP70	Q5T0N1	1121 aa		31.91	■■■□□ 2.7
ACADVL-238	ENST00000584103	STAC3	Q96MF2	364 aa		31.91	■■■□□ 2.7
ACADVL-238	ENST00000584103	C1orf167	Q5SNV9	1468 aa		31.91	■■■□□ 2.7
ACADVL-238	ENST00000584103	PHF23	Q9BUL5	403 aa	Predicted RBP	31.9	■■■□□ 2.7
ACADVL-238	ENST00000584103	DHX57	Q6P158	1386 aa	Known RBP	31.9	■■■□□ 2.7
ACADVL-238	ENST00000584103	ILDR2	Q71H61	639 aa		31.89	■■■□□ 2.7
ACADVL-238	ENST00000584103	DCAF11	Q8TEB1	546 aa		31.89	■■■□□ 2.7
ACADVL-238	ENST00000584103	KDM2A	Q9Y2K7	1162 aa		31.86	■■■□□ 2.69
ACADVL-238	ENST00000584103	WAPL	Q7Z5K2	1190 aa		31.85	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms