RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
PPP4R1-222ENST00000582594 ATP10BO94823 1461 aa12.39□□□□□ -0.43
PPP4R1-222ENST00000582594 SEC24BO95487 1268 aa12.39□□□□□ -0.43
PPP4R1-222ENST00000582594 POGKQ9P215 609 aa12.39□□□□□ -0.43
PPP4R1-222ENST00000582594 MYO5CQ9NQX4 1742 aa12.38□□□□□ -0.43
PPP4R1-222ENST00000582594 APAF1O14727 1248 aa12.38□□□□□ -0.43
PPP4R1-222ENST00000582594 CARMIL2Q6F5E8 1435 aa12.38□□□□□ -0.43
PPP4R1-222ENST00000582594 ARXQ96QS3 562 aa12.38□□□□□ -0.43
PPP4R1-222ENST00000582594 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-222ENST00000582594 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
PPP4R1-222ENST00000582594 USP19O94966 1318 aa12.36□□□□□ -0.43
PPP4R1-222ENST00000582594 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
PPP4R1-222ENST00000582594 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
PPP4R1-222ENST00000582594 ABCA8O94911 1581 aa12.35□□□□□ -0.43
PPP4R1-222ENST00000582594 CANXP27824 592 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-222ENST00000582594 SAMD9LQ8IVG5 1584 aa12.34□□□□□ -0.43
PPP4R1-222ENST00000582594 PANK1Q8TE04 598 aa12.34□□□□□ -0.43
PPP4R1-222ENST00000582594 COG6Q9Y2V7 657 aa12.34□□□□□ -0.43
PPP4R1-222ENST00000582594 GLI2P10070 1586 aa12.34□□□□□ -0.43
PPP4R1-222ENST00000582594 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
PPP4R1-222ENST00000582594 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
PPP4R1-222ENST00000582594 LAMC1P11047 1609 aa12.33□□□□□ -0.44
PPP4R1-222ENST00000582594 UHRF1BP1LA0JNW5 1464 aa12.33□□□□□ -0.44
PPP4R1-222ENST00000582594 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-222ENST00000582594 NKTRP30414 1462 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-222ENST00000582594 TRMT2AQ8IZ69 625 aaKnown RBP12.32□□□□□ -0.44
PPP4R1-222ENST00000582594 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
PPP4R1-222ENST00000582594 EIF2AK4Q9P2K8 1649 aaKnown RBP12.31□□□□□ -0.44
PPP4R1-222ENST00000582594 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
PPP4R1-222ENST00000582594 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
PPP4R1-222ENST00000582594 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
PPP4R1-222ENST00000582594 BECN1Q14457 450 aa12.3□□□□□ -0.44
PPP4R1-222ENST00000582594 UBE2Q2Q8WVN8 375 aa12.3□□□□□ -0.44
PPP4R1-222ENST00000582594 E9PSI1 815 aa12.3□□□□□ -0.44
PPP4R1-222ENST00000582594 CLUAP1Q96AJ1 413 aa12.3□□□□□ -0.44
PPP4R1-222ENST00000582594 RRAGDQ9NQL2 400 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-222ENST00000582594 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
PPP4R1-222ENST00000582594 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
PPP4R1-222ENST00000582594 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-222ENST00000582594 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-222ENST00000582594 UNC13BO14795 1591 aa12.28□□□□□ -0.44
PPP4R1-222ENST00000582594 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
PPP4R1-222ENST00000582594 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-222ENST00000582594 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.44
PPP4R1-222ENST00000582594 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.44
PPP4R1-222ENST00000582594 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.45
PPP4R1-222ENST00000582594 ARHGAP5Q13017 1502 aa12.27□□□□□ -0.45
PPP4R1-222ENST00000582594 PIK3C2GO75747 1445 aa12.27□□□□□ -0.45
PPP4R1-222ENST00000582594 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.45
PPP4R1-222ENST00000582594 GZF1Q9H116 711 aaPredicted RBP12.27□□□□□ -0.45
PPP4R1-222ENST00000582594 MAPK8IP3Q9UPT6 1336 aa12.26□□□□□ -0.45
PPP4R1-222ENST00000582594 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-222ENST00000582594 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
PPP4R1-222ENST00000582594 TNNT2P45379 298 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-222ENST00000582594 CDCA8Q53HL2 280 aa12.26□□□□□ -0.45
PPP4R1-222ENST00000582594 IQGAP3Q86VI3 1631 aa12.25□□□□□ -0.45
PPP4R1-222ENST00000582594 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
PPP4R1-222ENST00000582594 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 SYNMO15061 1565 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 NLRP1Q9C000 1473 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 ANTXR1Q9H6X2 564 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 RLBP1P12271 317 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
PPP4R1-222ENST00000582594 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
PPP4R1-222ENST00000582594 ABCC2Q92887 1545 aa12.23□□□□□ -0.45
PPP4R1-222ENST00000582594 L1TD1Q5T7N2 865 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-222ENST00000582594 CARD14Q9BXL6 1004 aa12.23□□□□□ -0.45
PPP4R1-222ENST00000582594 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
PPP4R1-222ENST00000582594 MYOM1P52179 1685 aa12.22□□□□□ -0.45
PPP4R1-222ENST00000582594 SCAF11Q99590 1463 aaKnown RBP12.22□□□□□ -0.45
PPP4R1-222ENST00000582594 TTC37Q6PGP7 1564 aa12.22□□□□□ -0.45
PPP4R1-222ENST00000582594 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
PPP4R1-222ENST00000582594 PANK2Q9BZ23 570 aa12.21□□□□□ -0.45
PPP4R1-222ENST00000582594 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.46
PPP4R1-222ENST00000582594 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
PPP4R1-222ENST00000582594 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-222ENST00000582594 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
PPP4R1-222ENST00000582594 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
PPP4R1-222ENST00000582594 CFAP70Q5T0N1 1121 aa12.19□□□□□ -0.46
PPP4R1-222ENST00000582594 ATP10AO60312 1499 aa12.19□□□□□ -0.46
PPP4R1-222ENST00000582594 MFAP1P55081 439 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-222ENST00000582594 DUOX2Q9NRD8 1548 aa12.18□□□□□ -0.46
PPP4R1-222ENST00000582594 NAP1L5Q96NT1 182 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-222ENST00000582594 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
PPP4R1-222ENST00000582594 MCM4P33991 863 aa12.18□□□□□ -0.46
PPP4R1-222ENST00000582594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
PPP4R1-222ENST00000582594 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-222ENST00000582594 TCP11L2Q8N4U5 519 aa12.17□□□□□ -0.46
PPP4R1-222ENST00000582594 NINLQ9Y2I6 1382 aa12.17□□□□□ -0.46
PPP4R1-222ENST00000582594 PLXNC1O60486 1568 aa12.17□□□□□ -0.46
PPP4R1-222ENST00000582594 DIP2BQ9P265 1576 aa12.16□□□□□ -0.46
PPP4R1-222ENST00000582594 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
PPP4R1-222ENST00000582594 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-222ENST00000582594 CEP152O94986 1710 aa12.15□□□□□ -0.46
PPP4R1-222ENST00000582594 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
PPP4R1-222ENST00000582594 RUNDC1Q96C34 613 aa12.15□□□□□ -0.47
PPP4R1-222ENST00000582594 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms