RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
CDK5RAP3-222ENST00000581708 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
CDK5RAP3-222ENST00000581708 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-222ENST00000581708 KCNA6P17658 529 aa18.89■□□□□ 0.61
CDK5RAP3-222ENST00000581708 TRPM2O94759 1503 aa18.89■□□□□ 0.61
CDK5RAP3-222ENST00000581708 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-222ENST00000581708 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
CDK5RAP3-222ENST00000581708 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
CDK5RAP3-222ENST00000581708 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
CDK5RAP3-222ENST00000581708 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
CDK5RAP3-222ENST00000581708 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 BCANQ96GW7 911 aa18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
CDK5RAP3-222ENST00000581708 CLTCL1P53675 1640 aa18.81■□□□□ 0.6
CDK5RAP3-222ENST00000581708 CHD2O14647 1828 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-222ENST00000581708 KIF1BO60333 1816 aa18.8■□□□□ 0.6
CDK5RAP3-222ENST00000581708 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
CDK5RAP3-222ENST00000581708 XIRP1Q702N8 1843 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-222ENST00000581708 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
CDK5RAP3-222ENST00000581708 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
CDK5RAP3-222ENST00000581708 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 PROSER2Q86WR7 435 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 SETBP1Q9Y6X0 1596 aa18.77■□□□□ 0.6
CDK5RAP3-222ENST00000581708 SETD5Q9C0A6 1442 aa18.77■□□□□ 0.6
CDK5RAP3-222ENST00000581708 RPGRIP1LQ68CZ1 1315 aa18.76■□□□□ 0.59
CDK5RAP3-222ENST00000581708 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-222ENST00000581708 NEXMIFQ5QGS0 1516 aa18.74■□□□□ 0.59
CDK5RAP3-222ENST00000581708 MPHOSPH9Q99550 1183 aa18.74■□□□□ 0.59
CDK5RAP3-222ENST00000581708 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-222ENST00000581708 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-222ENST00000581708 MSH6P52701 1360 aa18.72■□□□□ 0.59
CDK5RAP3-222ENST00000581708 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
CDK5RAP3-222ENST00000581708 HRCP23327 699 aa18.71■□□□□ 0.59
CDK5RAP3-222ENST00000581708 HSPA1LP34931 641 aa18.71■□□□□ 0.59
CDK5RAP3-222ENST00000581708 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
CDK5RAP3-222ENST00000581708 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.58
CDK5RAP3-222ENST00000581708 AMOTL2Q9Y2J4 779 aa18.67■□□□□ 0.58
CDK5RAP3-222ENST00000581708 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
CDK5RAP3-222ENST00000581708 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP3-222ENST00000581708 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-222ENST00000581708 C19orf44Q9H6X5 657 aa18.65■□□□□ 0.58
CDK5RAP3-222ENST00000581708 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
CDK5RAP3-222ENST00000581708 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
CDK5RAP3-222ENST00000581708 PPLO60437 1756 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 FOXD1Q16676 465 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SPATA31E1Q6ZUB1 1445 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 CADPS2Q86UW7 1296 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SLAIN2Q9P270 581 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 METP08581 1390 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 DCCP43146 1447 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-222ENST00000581708 PRAG1Q86YV5 1406 aa18.62■□□□□ 0.57
CDK5RAP3-222ENST00000581708 C14orf37Q86TY3 774 aa18.61■□□□□ 0.57
CDK5RAP3-222ENST00000581708 ATF3P18847 181 aa18.6■□□□□ 0.57
CDK5RAP3-222ENST00000581708 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SETD1AO15047 1707 aaKnown RBP18.58■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
CDK5RAP3-222ENST00000581708 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
CDK5RAP3-222ENST00000581708 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
CDK5RAP3-222ENST00000581708 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-222ENST00000581708 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
CDK5RAP3-222ENST00000581708 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
CDK5RAP3-222ENST00000581708 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
CDK5RAP3-222ENST00000581708 STAC3Q96MF2 364 aa18.52■□□□□ 0.56
CDK5RAP3-222ENST00000581708 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
CDK5RAP3-222ENST00000581708 MYOM2P54296 1465 aa18.51■□□□□ 0.55
CDK5RAP3-222ENST00000581708 TECPR2O15040 1411 aa18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
CDK5RAP3-222ENST00000581708 MST1RQ04912 1400 aa18.48■□□□□ 0.55
CDK5RAP3-222ENST00000581708 LAMC1P11047 1609 aa18.47■□□□□ 0.55
CDK5RAP3-222ENST00000581708 NALCNQ8IZF0 1738 aa18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 ABCC11Q96J66 1382 aa18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 JCADQ9P266 1359 aa18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 BRINP3Q76B58 766 aa18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 ILDR2Q71H61 639 aa18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
CDK5RAP3-222ENST00000581708 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
CDK5RAP3-222ENST00000581708 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-222ENST00000581708 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-222ENST00000581708 C1orf167Q5SNV9 1468 aa18.4■□□□□ 0.54
CDK5RAP3-222ENST00000581708 NHSL1Q5SYE7 1610 aa18.39■□□□□ 0.53
CDK5RAP3-222ENST00000581708 SOCS7O14512 581 aa18.38■□□□□ 0.53
CDK5RAP3-222ENST00000581708 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
CDK5RAP3-222ENST00000581708 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
CDK5RAP3-222ENST00000581708 STK26Q9P289 416 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms