RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
CBX1-206ENST00000581003 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
CBX1-206ENST00000581003 ALKQ9UM73 1620 aa18.96■□□□□ 0.63
CBX1-206ENST00000581003 TRPM2O94759 1503 aa18.95■□□□□ 0.62
CBX1-206ENST00000581003 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
CBX1-206ENST00000581003 FOXD1Q16676 465 aa18.94■□□□□ 0.62
CBX1-206ENST00000581003 PLEKHG1Q9ULL1 1385 aa18.92■□□□□ 0.62
CBX1-206ENST00000581003 XIRP1Q702N8 1843 aaKnown RBP18.91■□□□□ 0.62
CBX1-206ENST00000581003 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
CBX1-206ENST00000581003 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
CBX1-206ENST00000581003 BCANQ96GW7 911 aa18.91■□□□□ 0.62
CBX1-206ENST00000581003 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
CBX1-206ENST00000581003 ADAMTS13Q76LX8 1427 aa18.89■□□□□ 0.61
CBX1-206ENST00000581003 NWD1Q149M9 1564 aa18.89■□□□□ 0.61
CBX1-206ENST00000581003 PIP4K2BP78356 416 aa18.88■□□□□ 0.61
CBX1-206ENST00000581003 NRXN3Q9Y4C0 1643 aa18.87■□□□□ 0.61
CBX1-206ENST00000581003 NEXMIFQ5QGS0 1516 aa18.86■□□□□ 0.61
CBX1-206ENST00000581003 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
CBX1-206ENST00000581003 SETD5Q9C0A6 1442 aa18.85■□□□□ 0.61
CBX1-206ENST00000581003 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
CBX1-206ENST00000581003 ZNF326Q5BKZ1 582 aaKnown RBP18.84■□□□□ 0.61
CBX1-206ENST00000581003 TMEM94Q12767 1356 aa18.83■□□□□ 0.61
CBX1-206ENST00000581003 KCNA6P17658 529 aa18.83■□□□□ 0.6
CBX1-206ENST00000581003 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
CBX1-206ENST00000581003 MPHOSPH9Q99550 1183 aa18.82■□□□□ 0.6
CBX1-206ENST00000581003 KIF1BO60333 1816 aa18.81■□□□□ 0.6
CBX1-206ENST00000581003 NKTRP30414 1462 aaKnown RBP18.81■□□□□ 0.6
CBX1-206ENST00000581003 PTPRUQ92729 1446 aa18.81■□□□□ 0.6
CBX1-206ENST00000581003 CHD2O14647 1828 aaKnown RBP18.81■□□□□ 0.6
CBX1-206ENST00000581003 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
CBX1-206ENST00000581003 SETBP1Q9Y6X0 1596 aa18.8■□□□□ 0.6
CBX1-206ENST00000581003 TOM1O60784 492 aa18.79■□□□□ 0.6
CBX1-206ENST00000581003 HSPA1LP34931 641 aa18.78■□□□□ 0.6
CBX1-206ENST00000581003 HDGFP51858 240 aaKnown RBP18.78■□□□□ 0.6
CBX1-206ENST00000581003 PROSER2Q86WR7 435 aaPredicted RBP18.78■□□□□ 0.6
CBX1-206ENST00000581003 TBX22Q9Y458 520 aa18.78■□□□□ 0.6
CBX1-206ENST00000581003 METP08581 1390 aa18.76■□□□□ 0.59
CBX1-206ENST00000581003 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
CBX1-206ENST00000581003 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
CBX1-206ENST00000581003 PPLO60437 1756 aa18.73■□□□□ 0.59
CBX1-206ENST00000581003 SPATA31E1Q6ZUB1 1445 aa18.73■□□□□ 0.59
CBX1-206ENST00000581003 SETD1AO15047 1707 aaKnown RBP18.72■□□□□ 0.59
CBX1-206ENST00000581003 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
CBX1-206ENST00000581003 AMOTL2Q9Y2J4 779 aa18.7■□□□□ 0.58
CBX1-206ENST00000581003 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
CBX1-206ENST00000581003 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
CBX1-206ENST00000581003 ROBO1Q9Y6N7 1651 aa18.67■□□□□ 0.58
CBX1-206ENST00000581003 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
CBX1-206ENST00000581003 MSH6P52701 1360 aa18.67■□□□□ 0.58
CBX1-206ENST00000581003 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.65■□□□□ 0.58
CBX1-206ENST00000581003 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
CBX1-206ENST00000581003 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
CBX1-206ENST00000581003 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
CBX1-206ENST00000581003 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.57
CBX1-206ENST00000581003 VGFO15240 615 aaPredicted RBP18.63■□□□□ 0.57
CBX1-206ENST00000581003 ANKRD30BQ9BXX2 1392 aa18.62■□□□□ 0.57
CBX1-206ENST00000581003 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
CBX1-206ENST00000581003 MED1Q15648 1581 aaPredicted RBP18.61■□□□□ 0.57
CBX1-206ENST00000581003 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
CBX1-206ENST00000581003 ROBO2Q9HCK4 1378 aa18.61■□□□□ 0.57
CBX1-206ENST00000581003 SLAIN2Q9P270 581 aa18.59■□□□□ 0.57
CBX1-206ENST00000581003 PIK3C2GO75747 1445 aa18.58■□□□□ 0.57
CBX1-206ENST00000581003 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
CBX1-206ENST00000581003 ILDR2Q71H61 639 aa18.56■□□□□ 0.56
CBX1-206ENST00000581003 C19orf44Q9H6X5 657 aa18.56■□□□□ 0.56
CBX1-206ENST00000581003 PTCH1Q13635 1447 aa18.56■□□□□ 0.56
CBX1-206ENST00000581003 ADGRL3Q9HAR2 1447 aa18.56■□□□□ 0.56
CBX1-206ENST00000581003 ACIN1Q9UKV3 1341 aaKnown RBP18.55■□□□□ 0.56
CBX1-206ENST00000581003 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
CBX1-206ENST00000581003 MYOM2P54296 1465 aa18.54■□□□□ 0.56
CBX1-206ENST00000581003 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
CBX1-206ENST00000581003 HRCP23327 699 aa18.54■□□□□ 0.56
CBX1-206ENST00000581003 MST1RQ04912 1400 aa18.54■□□□□ 0.56
CBX1-206ENST00000581003 PHLPP1O60346 1717 aa18.53■□□□□ 0.56
CBX1-206ENST00000581003 ATF3P18847 181 aa18.53■□□□□ 0.56
CBX1-206ENST00000581003 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
CBX1-206ENST00000581003 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
CBX1-206ENST00000581003 STK26Q9P289 416 aa18.52■□□□□ 0.56
CBX1-206ENST00000581003 COL16A1Q07092 1604 aaPredicted RBP18.52■□□□□ 0.55
CBX1-206ENST00000581003 DCCP43146 1447 aa18.51■□□□□ 0.55
CBX1-206ENST00000581003 PLEKHH1Q9ULM0 1364 aa18.51■□□□□ 0.55
CBX1-206ENST00000581003 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
CBX1-206ENST00000581003 BRINP3Q76B58 766 aa18.5■□□□□ 0.55
CBX1-206ENST00000581003 LRPPRCP42704 1394 aaKnown RBP18.48■□□□□ 0.55
CBX1-206ENST00000581003 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
CBX1-206ENST00000581003 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
CBX1-206ENST00000581003 DDX17Q92841 729 aaKnown RBP18.48■□□□□ 0.55
CBX1-206ENST00000581003 AHDC1Q5TGY3 1603 aaPredicted RBP18.48■□□□□ 0.55
CBX1-206ENST00000581003 TECPR2O15040 1411 aa18.48■□□□□ 0.55
CBX1-206ENST00000581003 KNDC1Q76NI1 1749 aa18.47■□□□□ 0.55
CBX1-206ENST00000581003 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
CBX1-206ENST00000581003 KDM2AQ9Y2K7 1162 aa18.46■□□□□ 0.55
CBX1-206ENST00000581003 DCAF11Q8TEB1 546 aa18.45■□□□□ 0.54
CBX1-206ENST00000581003 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
CBX1-206ENST00000581003 C1orf167Q5SNV9 1468 aa18.45■□□□□ 0.54
CBX1-206ENST00000581003 LAMC1P11047 1609 aa18.45■□□□□ 0.54
CBX1-206ENST00000581003 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
CBX1-206ENST00000581003 NHSL1Q5SYE7 1610 aa18.43■□□□□ 0.54
CBX1-206ENST00000581003 ABCC11Q96J66 1382 aa18.42■□□□□ 0.54
CBX1-206ENST00000581003 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 230.2 ms