RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
CDK5RAP3-218ENST00000580391 TMEM131LA2VDJ0 1609 aa20.72■□□□□ 0.91
CDK5RAP3-218ENST00000580391 NEXMIFQ5QGS0 1516 aa20.72■□□□□ 0.91
CDK5RAP3-218ENST00000580391 ADGRF5Q8IZF2 1346 aa20.71■□□□□ 0.91
CDK5RAP3-218ENST00000580391 SPATA31D1Q6ZQQ2 1576 aa20.71■□□□□ 0.91
CDK5RAP3-218ENST00000580391 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
CDK5RAP3-218ENST00000580391 IDI1Q13907 227 aa20.68■□□□□ 0.9
CDK5RAP3-218ENST00000580391 ARID4BQ4LE39 1312 aaPredicted RBP20.66■□□□□ 0.9
CDK5RAP3-218ENST00000580391 SLC52A1Q9NWF4 448 aa20.66■□□□□ 0.9
CDK5RAP3-218ENST00000580391 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
CDK5RAP3-218ENST00000580391 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
CDK5RAP3-218ENST00000580391 ANP32CO43423 234 aa20.65■□□□□ 0.9
CDK5RAP3-218ENST00000580391 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
CDK5RAP3-218ENST00000580391 POLR3GLQ9BT43 218 aa20.64■□□□□ 0.89
CDK5RAP3-218ENST00000580391 CFAP70Q5T0N1 1121 aa20.63■□□□□ 0.89
CDK5RAP3-218ENST00000580391 RPGRIP1LQ68CZ1 1315 aa20.63■□□□□ 0.89
CDK5RAP3-218ENST00000580391 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
CDK5RAP3-218ENST00000580391 FER1L4A9Z1Z3 1794 aa20.61■□□□□ 0.89
CDK5RAP3-218ENST00000580391 TESK2Q96S53 571 aa20.61■□□□□ 0.89
CDK5RAP3-218ENST00000580391 ZMYM3Q14202 1370 aa20.6■□□□□ 0.89
CDK5RAP3-218ENST00000580391 ESF1Q9H501 851 aaKnown RBP20.59■□□□□ 0.89
CDK5RAP3-218ENST00000580391 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
CDK5RAP3-218ENST00000580391 ADGRB1O14514 1584 aa20.59■□□□□ 0.89
CDK5RAP3-218ENST00000580391 NUTM2DQ5VT03 806 aaPredicted RBP20.58■□□□□ 0.89
CDK5RAP3-218ENST00000580391 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
CDK5RAP3-218ENST00000580391 C3P01024 1663 aa20.56■□□□□ 0.88
CDK5RAP3-218ENST00000580391 A2ML1A8K2U0 1454 aa20.55■□□□□ 0.88
CDK5RAP3-218ENST00000580391 EIF3AQ14152 1382 aaKnown RBP20.55■□□□□ 0.88
CDK5RAP3-218ENST00000580391 ZFYVE9O95405 1425 aa20.55■□□□□ 0.88
CDK5RAP3-218ENST00000580391 C14orf93Q9H972 538 aaKnown RBP20.53■□□□□ 0.88
CDK5RAP3-218ENST00000580391 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
CDK5RAP3-218ENST00000580391 VGFO15240 615 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-218ENST00000580391 ASXL1Q8IXJ9 1541 aa20.52■□□□□ 0.88
CDK5RAP3-218ENST00000580391 ARHGEF28Q8N1W1 1705 aaKnown RBP20.52■□□□□ 0.88
CDK5RAP3-218ENST00000580391 QRICH2Q9H0J4 1663 aa20.52■□□□□ 0.87
CDK5RAP3-218ENST00000580391 UBR1Q8IWV7 1749 aa20.5■□□□□ 0.87
CDK5RAP3-218ENST00000580391 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
CDK5RAP3-218ENST00000580391 TNRQ92752 1358 aa20.5■□□□□ 0.87
CDK5RAP3-218ENST00000580391 TMF1P82094 1093 aa20.5■□□□□ 0.87
CDK5RAP3-218ENST00000580391 KDM5AP29375 1690 aaKnown RBP20.5■□□□□ 0.87
CDK5RAP3-218ENST00000580391 MYOM1P52179 1685 aa20.49■□□□□ 0.87
CDK5RAP3-218ENST00000580391 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
CDK5RAP3-218ENST00000580391 TMEM132EQ6IEE7 984 aa20.47■□□□□ 0.87
CDK5RAP3-218ENST00000580391 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
CDK5RAP3-218ENST00000580391 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
CDK5RAP3-218ENST00000580391 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
CDK5RAP3-218ENST00000580391 SENP3Q9H4L4 574 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP3-218ENST00000580391 ALKQ9UM73 1620 aa20.45■□□□□ 0.86
CDK5RAP3-218ENST00000580391 NRXN3Q9Y4C0 1643 aa20.43■□□□□ 0.86
CDK5RAP3-218ENST00000580391 TRAK1Q9UPV9 953 aa20.43■□□□□ 0.86
CDK5RAP3-218ENST00000580391 RIMS1Q86UR5 1692 aaKnown RBP20.43■□□□□ 0.86
CDK5RAP3-218ENST00000580391 CEBPAP49715 358 aaPredicted RBP20.43■□□□□ 0.86
CDK5RAP3-218ENST00000580391 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
CDK5RAP3-218ENST00000580391 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
CDK5RAP3-218ENST00000580391 NLRP1Q9C000 1473 aa20.4■□□□□ 0.86
CDK5RAP3-218ENST00000580391 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.86
CDK5RAP3-218ENST00000580391 PTPRMP28827 1452 aa20.39■□□□□ 0.85
CDK5RAP3-218ENST00000580391 CCDC184Q52MB2 194 aa20.37■□□□□ 0.85
CDK5RAP3-218ENST00000580391 ADAMTSL3P82987 1691 aa20.36■□□□□ 0.85
CDK5RAP3-218ENST00000580391 CDCA8Q53HL2 280 aa20.36■□□□□ 0.85
CDK5RAP3-218ENST00000580391 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
CDK5RAP3-218ENST00000580391 YTHDC2Q9H6S0 1430 aaKnown RBP20.35■□□□□ 0.85
CDK5RAP3-218ENST00000580391 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
CDK5RAP3-218ENST00000580391 PANK3Q9H999 370 aa20.34■□□□□ 0.85
CDK5RAP3-218ENST00000580391 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
CDK5RAP3-218ENST00000580391 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-218ENST00000580391 STK26Q9P289 416 aa20.32■□□□□ 0.84
CDK5RAP3-218ENST00000580391 SLC24A1O60721 1099 aa20.31■□□□□ 0.84
CDK5RAP3-218ENST00000580391 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDK5RAP3-218ENST00000580391 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
CDK5RAP3-218ENST00000580391 KNDC1Q76NI1 1749 aa20.29■□□□□ 0.84
CDK5RAP3-218ENST00000580391 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP3-218ENST00000580391 PARD3Q8TEW0 1356 aa20.28■□□□□ 0.84
CDK5RAP3-218ENST00000580391 SLIT1O75093 1534 aa20.27■□□□□ 0.84
CDK5RAP3-218ENST00000580391 DLC1Q96QB1 1528 aa20.27■□□□□ 0.84
CDK5RAP3-218ENST00000580391 CEP170BQ9Y4F5 1589 aaPredicted RBP20.27■□□□□ 0.83
CDK5RAP3-218ENST00000580391 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
CDK5RAP3-218ENST00000580391 ARHGAP23Q9P227 1491 aa20.26■□□□□ 0.83
CDK5RAP3-218ENST00000580391 ZNF142P52746 1687 aaPredicted RBP20.25■□□□□ 0.83
CDK5RAP3-218ENST00000580391 METP08581 1390 aa20.25■□□□□ 0.83
CDK5RAP3-218ENST00000580391 LRPPRCP42704 1394 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-218ENST00000580391 RALBP1Q15311 655 aa20.24■□□□□ 0.83
CDK5RAP3-218ENST00000580391 PRAM1Q96QH2 718 aa20.24■□□□□ 0.83
CDK5RAP3-218ENST00000580391 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-218ENST00000580391 CC2D1BQ5T0F9 858 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-218ENST00000580391 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
CDK5RAP3-218ENST00000580391 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-218ENST00000580391 LTKP29376 864 aa20.23■□□□□ 0.83
CDK5RAP3-218ENST00000580391 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
CDK5RAP3-218ENST00000580391 EVC2Q86UK5 1308 aa20.21■□□□□ 0.83
CDK5RAP3-218ENST00000580391 CPS1P31327 1500 aa20.21■□□□□ 0.83
CDK5RAP3-218ENST00000580391 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-218ENST00000580391 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
CDK5RAP3-218ENST00000580391 POGKQ9P215 609 aa20.19■□□□□ 0.82
CDK5RAP3-218ENST00000580391 KNSTRNQ9Y448 316 aa20.19■□□□□ 0.82
CDK5RAP3-218ENST00000580391 ABCC11Q96J66 1382 aa20.19■□□□□ 0.82
CDK5RAP3-218ENST00000580391 PLEKHH1Q9ULM0 1364 aa20.19■□□□□ 0.82
CDK5RAP3-218ENST00000580391 BCANQ96GW7 911 aa20.19■□□□□ 0.82
CDK5RAP3-218ENST00000580391 AMER1Q5JTC6 1135 aaPredicted RBP20.18■□□□□ 0.82
CDK5RAP3-218ENST00000580391 TXNDC2Q86VQ3 553 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms