RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 KIF15Q9NS87 1388 aa20.98■□□□□ 0.95
CDK5RAP3-213ENST00000579605 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
CDK5RAP3-213ENST00000579605 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
CDK5RAP3-213ENST00000579605 ATF3P18847 181 aa20.97■□□□□ 0.95
CDK5RAP3-213ENST00000579605 SRCAPQ6ZRS2 3230 aa20.97■□□□□ 0.95
CDK5RAP3-213ENST00000579605 NWD1Q149M9 1564 aa20.96■□□□□ 0.95
CDK5RAP3-213ENST00000579605 CADPS2Q86UW7 1296 aa20.94■□□□□ 0.94
CDK5RAP3-213ENST00000579605 QTRT2Q9H974 415 aaKnown RBP20.94■□□□□ 0.94
CDK5RAP3-213ENST00000579605 C19orf44Q9H6X5 657 aa20.93■□□□□ 0.94
CDK5RAP3-213ENST00000579605 CDK12Q9NYV4 1490 aaPredicted RBP20.93■□□□□ 0.94
CDK5RAP3-213ENST00000579605 C8orf37Q96NL8 207 aa20.92■□□□□ 0.94
CDK5RAP3-213ENST00000579605 MYOM3Q5VTT5 1437 aa20.91■□□□□ 0.94
CDK5RAP3-213ENST00000579605 ERBINQ96RT1 1412 aa20.9■□□□□ 0.94
CDK5RAP3-213ENST00000579605 RBM6P78332 1123 aaKnown RBP20.9■□□□□ 0.94
CDK5RAP3-213ENST00000579605 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
CDK5RAP3-213ENST00000579605 SLC52A1Q9NWF4 448 aa20.9■□□□□ 0.94
CDK5RAP3-213ENST00000579605 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.93
CDK5RAP3-213ENST00000579605 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.93
CDK5RAP3-213ENST00000579605 TBX22Q9Y458 520 aa20.89■□□□□ 0.93
CDK5RAP3-213ENST00000579605 KDM5AP29375 1690 aaKnown RBP20.89■□□□□ 0.93
CDK5RAP3-213ENST00000579605 RGS12O14924 1447 aa20.88■□□□□ 0.93
CDK5RAP3-213ENST00000579605 PLEKHG1Q9ULL1 1385 aa20.88■□□□□ 0.93
CDK5RAP3-213ENST00000579605 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
CDK5RAP3-213ENST00000579605 ADGRB3O60242 1522 aa20.88■□□□□ 0.93
CDK5RAP3-213ENST00000579605 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
CDK5RAP3-213ENST00000579605 ZRANB1Q9UGI0 708 aa20.87■□□□□ 0.93
CDK5RAP3-213ENST00000579605 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
CDK5RAP3-213ENST00000579605 AHDC1Q5TGY3 1603 aaPredicted RBP20.86■□□□□ 0.93
CDK5RAP3-213ENST00000579605 SHPRHQ149N8 1683 aa20.86■□□□□ 0.93
CDK5RAP3-213ENST00000579605 NOS1P29475 1434 aa20.86■□□□□ 0.93
CDK5RAP3-213ENST00000579605 RIMS2Q9UQ26 1411 aa20.86■□□□□ 0.93
CDK5RAP3-213ENST00000579605 ABCC5O15440 1437 aa20.84■□□□□ 0.93
CDK5RAP3-213ENST00000579605 ZFYVE9O95405 1425 aa20.82■□□□□ 0.92
CDK5RAP3-213ENST00000579605 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
CDK5RAP3-213ENST00000579605 CHD2O14647 1828 aaKnown RBP20.82■□□□□ 0.92
CDK5RAP3-213ENST00000579605 ADAMTS2O95450 1211 aa20.81■□□□□ 0.92
CDK5RAP3-213ENST00000579605 FOXD1Q16676 465 aa20.81■□□□□ 0.92
CDK5RAP3-213ENST00000579605 DDX17Q92841 729 aaKnown RBP20.81■□□□□ 0.92
CDK5RAP3-213ENST00000579605 LRRC59Q96AG4 307 aaKnown RBP20.81■□□□□ 0.92
CDK5RAP3-213ENST00000579605 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
CDK5RAP3-213ENST00000579605 LMTK2Q8IWU2 1503 aa20.81■□□□□ 0.92
CDK5RAP3-213ENST00000579605 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
CDK5RAP3-213ENST00000579605 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.8■□□□□ 0.92
CDK5RAP3-213ENST00000579605 DIP2AQ14689 1571 aa20.8■□□□□ 0.92
CDK5RAP3-213ENST00000579605 ATAD2Q6PL18 1390 aa20.79■□□□□ 0.92
CDK5RAP3-213ENST00000579605 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
CDK5RAP3-213ENST00000579605 ANKRD30AQ9BXX3 1397 aa20.75■□□□□ 0.91
CDK5RAP3-213ENST00000579605 ADAMTS13Q76LX8 1427 aa20.75■□□□□ 0.91
CDK5RAP3-213ENST00000579605 DAPK1P53355 1430 aa20.74■□□□□ 0.91
CDK5RAP3-213ENST00000579605 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
CDK5RAP3-213ENST00000579605 USP21Q9UK80 565 aa20.73■□□□□ 0.91
CDK5RAP3-213ENST00000579605 ASXL1Q8IXJ9 1541 aa20.73■□□□□ 0.91
CDK5RAP3-213ENST00000579605 PNPLA6Q8IY17 1366 aa20.72■□□□□ 0.91
CDK5RAP3-213ENST00000579605 PIK3R4Q99570 1358 aa20.71■□□□□ 0.91
CDK5RAP3-213ENST00000579605 PTPRUQ92729 1446 aa20.7■□□□□ 0.9
CDK5RAP3-213ENST00000579605 TRPC5Q9UL62 973 aaPredicted RBP20.69■□□□□ 0.9
CDK5RAP3-213ENST00000579605 MST1RQ04912 1400 aa20.68■□□□□ 0.9
CDK5RAP3-213ENST00000579605 VPS8Q8N3P4 1428 aa20.68■□□□□ 0.9
CDK5RAP3-213ENST00000579605 CROCC2H7BZ55 1655 aa20.67■□□□□ 0.9
CDK5RAP3-213ENST00000579605 MYO5BQ9ULV0 1848 aa20.67■□□□□ 0.9
CDK5RAP3-213ENST00000579605 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
CDK5RAP3-213ENST00000579605 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
CDK5RAP3-213ENST00000579605 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
CDK5RAP3-213ENST00000579605 RPRD2Q5VT52 1461 aaKnown RBP20.64■□□□□ 0.89
CDK5RAP3-213ENST00000579605 DCCP43146 1447 aa20.64■□□□□ 0.89
CDK5RAP3-213ENST00000579605 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
CDK5RAP3-213ENST00000579605 TRPM2O94759 1503 aa20.63■□□□□ 0.89
CDK5RAP3-213ENST00000579605 FNBP4Q8N3X1 1017 aaPredicted RBP20.6■□□□□ 0.89
CDK5RAP3-213ENST00000579605 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
CDK5RAP3-213ENST00000579605 APLP2Q06481 763 aa20.57■□□□□ 0.88
CDK5RAP3-213ENST00000579605 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
CDK5RAP3-213ENST00000579605 ATRNO75882 1429 aa20.56■□□□□ 0.88
CDK5RAP3-213ENST00000579605 ORAI2Q96SN7 254 aa20.56■□□□□ 0.88
CDK5RAP3-213ENST00000579605 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
CDK5RAP3-213ENST00000579605 FAM50AQ14320 339 aaKnown RBP20.55■□□□□ 0.88
CDK5RAP3-213ENST00000579605 DEFB132Q7Z7B7 95 aa20.55■□□□□ 0.88
CDK5RAP3-213ENST00000579605 METP08581 1390 aa20.55■□□□□ 0.88
CDK5RAP3-213ENST00000579605 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
CDK5RAP3-213ENST00000579605 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
CDK5RAP3-213ENST00000579605 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
CDK5RAP3-213ENST00000579605 C1orf167Q5SNV9 1468 aa20.52■□□□□ 0.88
CDK5RAP3-213ENST00000579605 GJD4Q96KN9 370 aaPredicted RBP20.52■□□□□ 0.88
CDK5RAP3-213ENST00000579605 PTCH1Q13635 1447 aa20.52■□□□□ 0.87
CDK5RAP3-213ENST00000579605 UNC13BO14795 1591 aa20.51■□□□□ 0.87
CDK5RAP3-213ENST00000579605 EP400Q96L91 3159 aa20.49■□□□□ 0.87
CDK5RAP3-213ENST00000579605 SF3B2Q13435 895 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-213ENST00000579605 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
CDK5RAP3-213ENST00000579605 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
CDK5RAP3-213ENST00000579605 BCL9LQ86UU0 1499 aa20.47■□□□□ 0.87
CDK5RAP3-213ENST00000579605 BLMP54132 1417 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP3-213ENST00000579605 PSDA5PKW4 1024 aaPredicted RBP20.46■□□□□ 0.87
CDK5RAP3-213ENST00000579605 XPCQ01831 940 aaPredicted RBP20.44■□□□□ 0.86
CDK5RAP3-213ENST00000579605 NRXN3Q9Y4C0 1643 aa20.43■□□□□ 0.86
CDK5RAP3-213ENST00000579605 E9PCH4 1651 aa20.42■□□□□ 0.86
CDK5RAP3-213ENST00000579605 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
CDK5RAP3-213ENST00000579605 NUP155O75694 1391 aa20.41■□□□□ 0.86
CDK5RAP3-213ENST00000579605 UNC5CLQ8IV45 518 aa20.4■□□□□ 0.86
CDK5RAP3-213ENST00000579605 NALCNQ8IZF0 1738 aa20.4■□□□□ 0.86
CDK5RAP3-213ENST00000579605 MYOM2P54296 1465 aa20.38■□□□□ 0.85
CDK5RAP3-213ENST00000579605 FOXO3O43524 673 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms