RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 SCAF11Q99590 1463 aaKnown RBP22.6■■□□□ 1.21
TOM1L1-221ENST00000575882 KDM2BQ8NHM5 1336 aa22.59■■□□□ 1.21
TOM1L1-221ENST00000575882 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
TOM1L1-221ENST00000575882 TRPM2O94759 1503 aa22.59■■□□□ 1.21
TOM1L1-221ENST00000575882 GOLGA2Q08379 1002 aa22.58■■□□□ 1.21
TOM1L1-221ENST00000575882 SPHKAPQ2M3C7 1700 aa22.58■■□□□ 1.21
TOM1L1-221ENST00000575882 ASXL1Q8IXJ9 1541 aa22.58■■□□□ 1.2
TOM1L1-221ENST00000575882 NEFMP07197 916 aa22.57■■□□□ 1.2
TOM1L1-221ENST00000575882 SCAPERQ9BY12 1400 aa22.56■■□□□ 1.2
TOM1L1-221ENST00000575882 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
TOM1L1-221ENST00000575882 CENPQQ7L2Z9 268 aaPredicted RBP22.55■■□□□ 1.2
TOM1L1-221ENST00000575882 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
TOM1L1-221ENST00000575882 CEP152O94986 1710 aa22.55■■□□□ 1.2
TOM1L1-221ENST00000575882 USP35Q9P2H5 1018 aa22.54■■□□□ 1.2
TOM1L1-221ENST00000575882 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
TOM1L1-221ENST00000575882 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
TOM1L1-221ENST00000575882 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
TOM1L1-221ENST00000575882 ZCCHC11Q5TAX3 1644 aaKnown RBP22.54■■□□□ 1.2
TOM1L1-221ENST00000575882 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
TOM1L1-221ENST00000575882 PTPRTO14522 1441 aa22.53■■□□□ 1.2
TOM1L1-221ENST00000575882 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.53■■□□□ 1.2
TOM1L1-221ENST00000575882 MYOM1P52179 1685 aa22.52■■□□□ 1.2
TOM1L1-221ENST00000575882 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
TOM1L1-221ENST00000575882 SLFN5Q08AF3 891 aa22.52■■□□□ 1.19
TOM1L1-221ENST00000575882 EIF3AQ14152 1382 aaKnown RBP22.51■■□□□ 1.19
TOM1L1-221ENST00000575882 NPC1L1Q9UHC9 1359 aa22.51■■□□□ 1.19
TOM1L1-221ENST00000575882 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
TOM1L1-221ENST00000575882 AFAP1Q8N556 730 aa22.5■■□□□ 1.19
TOM1L1-221ENST00000575882 ZFYVE16Q7Z3T8 1539 aa22.49■■□□□ 1.19
TOM1L1-221ENST00000575882 RTEL1-TNFRSF6BF6WH68 1400 aa22.49■■□□□ 1.19
TOM1L1-221ENST00000575882 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
TOM1L1-221ENST00000575882 TRMT2AQ8IZ69 625 aaKnown RBP22.46■■□□□ 1.19
TOM1L1-221ENST00000575882 DEPDC5O75140 1603 aa22.46■■□□□ 1.19
TOM1L1-221ENST00000575882 TET3O43151 1660 aa22.45■■□□□ 1.19
TOM1L1-221ENST00000575882 APAF1O14727 1248 aa22.45■■□□□ 1.18
TOM1L1-221ENST00000575882 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
TOM1L1-221ENST00000575882 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
TOM1L1-221ENST00000575882 UHRF1BP1LA0JNW5 1464 aa22.44■■□□□ 1.18
TOM1L1-221ENST00000575882 NKTRP30414 1462 aaKnown RBP22.43■■□□□ 1.18
TOM1L1-221ENST00000575882 KIAA1210Q9ULL0 1709 aa22.43■■□□□ 1.18
TOM1L1-221ENST00000575882 C8orf34Q49A92 452 aa22.42■■□□□ 1.18
TOM1L1-221ENST00000575882 KANK1Q14678 1352 aa22.42■■□□□ 1.18
TOM1L1-221ENST00000575882 SLC4A3P48751 1232 aa22.4■■□□□ 1.18
TOM1L1-221ENST00000575882 CFAP70Q5T0N1 1121 aa22.4■■□□□ 1.18
TOM1L1-221ENST00000575882 ERVK-7P63135 1459 aa22.4■■□□□ 1.18
TOM1L1-221ENST00000575882 ARAP3Q8WWN8 1544 aa22.39■■□□□ 1.18
TOM1L1-221ENST00000575882 BCAR3O75815 825 aa22.39■■□□□ 1.17
TOM1L1-221ENST00000575882 RGS3P49796 1198 aa22.39■■□□□ 1.17
TOM1L1-221ENST00000575882 E9PSI1 815 aa22.38■■□□□ 1.17
TOM1L1-221ENST00000575882 VWDEQ8N2E2 1590 aa22.38■■□□□ 1.17
TOM1L1-221ENST00000575882 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
TOM1L1-221ENST00000575882 KIF3BO15066 747 aa22.37■■□□□ 1.17
TOM1L1-221ENST00000575882 CARD14Q9BXL6 1004 aa22.37■■□□□ 1.17
TOM1L1-221ENST00000575882 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
TOM1L1-221ENST00000575882 ABCA6Q8N139 1617 aa22.37■■□□□ 1.17
TOM1L1-221ENST00000575882 MAP3K4Q9Y6R4 1608 aa22.37■■□□□ 1.17
TOM1L1-221ENST00000575882 NEURL4Q96JN8 1562 aa22.36■■□□□ 1.17
TOM1L1-221ENST00000575882 SLC24A1O60721 1099 aa22.36■■□□□ 1.17
TOM1L1-221ENST00000575882 MYOM2P54296 1465 aa22.36■■□□□ 1.17
TOM1L1-221ENST00000575882 ADGRF5Q8IZF2 1346 aa22.36■■□□□ 1.17
TOM1L1-221ENST00000575882 UGGT1Q9NYU2 1555 aa22.36■■□□□ 1.17
TOM1L1-221ENST00000575882 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
TOM1L1-221ENST00000575882 INO80Q9ULG1 1556 aaPredicted RBP22.35■■□□□ 1.17
TOM1L1-221ENST00000575882 NFKBIBQ15653 356 aa22.33■■□□□ 1.17
TOM1L1-221ENST00000575882 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
TOM1L1-221ENST00000575882 IL27Q8NEV9 243 aa22.31■■□□□ 1.16
TOM1L1-221ENST00000575882 FANCAO15360 1455 aa22.3■■□□□ 1.16
TOM1L1-221ENST00000575882 MROH1Q8NDA8 1641 aa22.29■■□□□ 1.16
TOM1L1-221ENST00000575882 IGHDP01880 384 aa22.28■■□□□ 1.16
TOM1L1-221ENST00000575882 POLR3AO14802 1390 aaPredicted RBP22.28■■□□□ 1.16
TOM1L1-221ENST00000575882 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
TOM1L1-221ENST00000575882 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
TOM1L1-221ENST00000575882 KIF1BO60333 1816 aa22.27■■□□□ 1.16
TOM1L1-221ENST00000575882 CGNL1Q0VF96 1302 aa22.27■■□□□ 1.16
TOM1L1-221ENST00000575882 PDE3AQ14432 1141 aa22.27■■□□□ 1.16
TOM1L1-221ENST00000575882 WWC1Q8IX03 1113 aa22.27■■□□□ 1.16
TOM1L1-221ENST00000575882 IFT172Q9UG01 1749 aa22.26■■□□□ 1.15
TOM1L1-221ENST00000575882 MYO3AQ8NEV4 1616 aa22.26■■□□□ 1.15
TOM1L1-221ENST00000575882 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 GSE1Q14687 1217 aa22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 EFCAB6Q5THR3 1501 aa22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 ADGRL1O94910 1474 aa22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 MROH2AA6NES4 1674 aa22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
TOM1L1-221ENST00000575882 NRXN1Q9ULB1 1477 aa22.24■■□□□ 1.15
TOM1L1-221ENST00000575882 PANK1Q8TE04 598 aa22.23■■□□□ 1.15
TOM1L1-221ENST00000575882 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
TOM1L1-221ENST00000575882 COG6Q9Y2V7 657 aa22.23■■□□□ 1.15
TOM1L1-221ENST00000575882 NSD3Q9BZ95 1437 aa22.22■■□□□ 1.15
TOM1L1-221ENST00000575882 MORC1Q86VD1 984 aa22.22■■□□□ 1.15
TOM1L1-221ENST00000575882 NOS1P29475 1434 aa22.21■■□□□ 1.15
TOM1L1-221ENST00000575882 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
TOM1L1-221ENST00000575882 TNNT2P45379 298 aaPredicted RBP22.2■■□□□ 1.14
TOM1L1-221ENST00000575882 SHPRHQ149N8 1683 aa22.2■■□□□ 1.14
TOM1L1-221ENST00000575882 NEUROD2Q15784 382 aa22.2■■□□□ 1.14
TOM1L1-221ENST00000575882 FRAT1Q92837 279 aaPredicted RBP22.19■■□□□ 1.14
TOM1L1-221ENST00000575882 RRP7AQ9Y3A4 280 aaKnown RBP22.19■■□□□ 1.14
TOM1L1-221ENST00000575882 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
TOM1L1-221ENST00000575882 RTN4Q9NQC3 1192 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms