RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.7
CTDNEP1-211ENST00000575783 NWD1Q149M9 1564 aa25.62■■□□□ 1.69
CTDNEP1-211ENST00000575783 LRP6O75581 1613 aa25.62■■□□□ 1.69
CTDNEP1-211ENST00000575783 RXRBP28702 533 aa25.61■■□□□ 1.69
CTDNEP1-211ENST00000575783 NOS1P29475 1434 aa25.61■■□□□ 1.69
CTDNEP1-211ENST00000575783 KDM5AP29375 1690 aaKnown RBP25.61■■□□□ 1.69
CTDNEP1-211ENST00000575783 LMTK2Q8IWU2 1503 aa25.59■■□□□ 1.69
CTDNEP1-211ENST00000575783 HDGFP51858 240 aaKnown RBP25.59■■□□□ 1.69
CTDNEP1-211ENST00000575783 ADGRB3O60242 1522 aa25.58■■□□□ 1.69
CTDNEP1-211ENST00000575783 SRCAPQ6ZRS2 3230 aa25.58■■□□□ 1.68
CTDNEP1-211ENST00000575783 PLEKHG1Q9ULL1 1385 aa25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 DAPK1P53355 1430 aa25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 FGD6Q6ZV73 1430 aa25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 COL16A1Q07092 1604 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 NUTM2BA6NNL0 878 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 NUTM2EB1AL46 878 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 ATF3P18847 181 aa25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 NUTM2AQ8IVF1 878 aaPredicted RBP25.57■■□□□ 1.68
CTDNEP1-211ENST00000575783 ANKRD30AQ9BXX3 1397 aa25.56■■□□□ 1.68
CTDNEP1-211ENST00000575783 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
CTDNEP1-211ENST00000575783 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
CTDNEP1-211ENST00000575783 C19orf44Q9H6X5 657 aa25.54■■□□□ 1.68
CTDNEP1-211ENST00000575783 RIMS2Q9UQ26 1411 aa25.54■■□□□ 1.68
CTDNEP1-211ENST00000575783 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
CTDNEP1-211ENST00000575783 LOC105371045A0A1W2PR82 267 aa25.52■■□□□ 1.68
CTDNEP1-211ENST00000575783 NUTM2DQ5VT03 806 aaPredicted RBP25.52■■□□□ 1.68
CTDNEP1-211ENST00000575783 ZFYVE9O95405 1425 aa25.52■■□□□ 1.68
CTDNEP1-211ENST00000575783 NCOA3Q9Y6Q9 1424 aa25.51■■□□□ 1.67
CTDNEP1-211ENST00000575783 CROCC2H7BZ55 1655 aa25.5■■□□□ 1.67
CTDNEP1-211ENST00000575783 PTPN23Q9H3S7 1636 aa25.5■■□□□ 1.67
CTDNEP1-211ENST00000575783 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.48■■□□□ 1.67
CTDNEP1-211ENST00000575783 AFF2P51816 1311 aa25.47■■□□□ 1.67
CTDNEP1-211ENST00000575783 APLP2Q06481 763 aa25.47■■□□□ 1.67
CTDNEP1-211ENST00000575783 BRINP3Q76B58 766 aa25.47■■□□□ 1.67
CTDNEP1-211ENST00000575783 CHD2O14647 1828 aaKnown RBP25.46■■□□□ 1.67
CTDNEP1-211ENST00000575783 AHDC1Q5TGY3 1603 aaPredicted RBP25.44■■□□□ 1.66
CTDNEP1-211ENST00000575783 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
CTDNEP1-211ENST00000575783 RPRD2Q5VT52 1461 aaKnown RBP25.41■■□□□ 1.66
CTDNEP1-211ENST00000575783 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
CTDNEP1-211ENST00000575783 ADAMTS13Q76LX8 1427 aa25.4■■□□□ 1.66
CTDNEP1-211ENST00000575783 QTRT2Q9H974 415 aaKnown RBP25.4■■□□□ 1.66
CTDNEP1-211ENST00000575783 SHPRHQ149N8 1683 aa25.39■■□□□ 1.66
CTDNEP1-211ENST00000575783 C8orf37Q96NL8 207 aa25.39■■□□□ 1.66
CTDNEP1-211ENST00000575783 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.39■■□□□ 1.65
CTDNEP1-211ENST00000575783 PIK3R4Q99570 1358 aa25.37■■□□□ 1.65
CTDNEP1-211ENST00000575783 RBM6P78332 1123 aaKnown RBP25.36■■□□□ 1.65
CTDNEP1-211ENST00000575783 TMEM131LA2VDJ0 1609 aa25.36■■□□□ 1.65
CTDNEP1-211ENST00000575783 ANKRD50Q9ULJ7 1429 aa25.36■■□□□ 1.65
CTDNEP1-211ENST00000575783 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
CTDNEP1-211ENST00000575783 LRRC59Q96AG4 307 aaKnown RBP25.35■■□□□ 1.65
CTDNEP1-211ENST00000575783 GCC2Q8IWJ2 1684 aa25.33■■□□□ 1.65
CTDNEP1-211ENST00000575783 MYO5BQ9ULV0 1848 aa25.33■■□□□ 1.65
CTDNEP1-211ENST00000575783 DIP2AQ14689 1571 aa25.33■■□□□ 1.65
CTDNEP1-211ENST00000575783 DDX17Q92841 729 aaKnown RBP25.32■■□□□ 1.64
CTDNEP1-211ENST00000575783 RGS12O14924 1447 aa25.31■■□□□ 1.64
CTDNEP1-211ENST00000575783 PTPRUQ92729 1446 aa25.31■■□□□ 1.64
CTDNEP1-211ENST00000575783 SETD5Q9C0A6 1442 aa25.31■■□□□ 1.64
CTDNEP1-211ENST00000575783 ADGRL2O95490 1459 aa25.3■■□□□ 1.64
CTDNEP1-211ENST00000575783 NGLY1Q96IV0 654 aa25.29■■□□□ 1.64
CTDNEP1-211ENST00000575783 ASXL1Q8IXJ9 1541 aa25.28■■□□□ 1.64
CTDNEP1-211ENST00000575783 ADAMTS2O95450 1211 aa25.28■■□□□ 1.64
CTDNEP1-211ENST00000575783 DCCP43146 1447 aa25.26■■□□□ 1.63
CTDNEP1-211ENST00000575783 TRPM2O94759 1503 aa25.26■■□□□ 1.63
CTDNEP1-211ENST00000575783 MST1RQ04912 1400 aa25.25■■□□□ 1.63
CTDNEP1-211ENST00000575783 PNPLA6Q8IY17 1366 aa25.23■■□□□ 1.63
CTDNEP1-211ENST00000575783 ATAD2Q6PL18 1390 aa25.2■■□□□ 1.63
CTDNEP1-211ENST00000575783 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
CTDNEP1-211ENST00000575783 ZNF326Q5BKZ1 582 aaKnown RBP25.18■■□□□ 1.62
CTDNEP1-211ENST00000575783 USP21Q9UK80 565 aa25.18■■□□□ 1.62
CTDNEP1-211ENST00000575783 FOXD1Q16676 465 aa25.17■■□□□ 1.62
CTDNEP1-211ENST00000575783 METP08581 1390 aa25.17■■□□□ 1.62
CTDNEP1-211ENST00000575783 UNC13BO14795 1591 aa25.15■■□□□ 1.62
CTDNEP1-211ENST00000575783 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.62
CTDNEP1-211ENST00000575783 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
CTDNEP1-211ENST00000575783 E9PCH4 1651 aa25.13■■□□□ 1.61
CTDNEP1-211ENST00000575783 NUP155O75694 1391 aa25.13■■□□□ 1.61
CTDNEP1-211ENST00000575783 ADGRL3Q9HAR2 1447 aa25.11■■□□□ 1.61
CTDNEP1-211ENST00000575783 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
CTDNEP1-211ENST00000575783 ORAI2Q96SN7 254 aa25.09■■□□□ 1.61
CTDNEP1-211ENST00000575783 FNBP4Q8N3X1 1017 aaPredicted RBP25.08■■□□□ 1.61
CTDNEP1-211ENST00000575783 EP400Q96L91 3159 aa25.08■■□□□ 1.61
CTDNEP1-211ENST00000575783 C1orf167Q5SNV9 1468 aa25.07■■□□□ 1.6
CTDNEP1-211ENST00000575783 SETBP1Q9Y6X0 1596 aa25.06■■□□□ 1.6
CTDNEP1-211ENST00000575783 SOS2Q07890 1332 aaPredicted RBP25.06■■□□□ 1.6
CTDNEP1-211ENST00000575783 NRXN3Q9Y4C0 1643 aa25.05■■□□□ 1.6
CTDNEP1-211ENST00000575783 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
CTDNEP1-211ENST00000575783 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.59
CTDNEP1-211ENST00000575783 ITGAEP38570 1179 aa25.01■■□□□ 1.59
CTDNEP1-211ENST00000575783 ATRNO75882 1429 aa25.01■■□□□ 1.59
CTDNEP1-211ENST00000575783 PTCH1Q13635 1447 aa25.01■■□□□ 1.59
CTDNEP1-211ENST00000575783 ROCK1Q13464 1354 aa25■■□□□ 1.59
CTDNEP1-211ENST00000575783 NALCNQ8IZF0 1738 aa24.97■■□□□ 1.59
CTDNEP1-211ENST00000575783 GJD4Q96KN9 370 aaPredicted RBP24.95■■□□□ 1.58
CTDNEP1-211ENST00000575783 ROBO2Q9HCK4 1378 aa24.94■■□□□ 1.58
CTDNEP1-211ENST00000575783 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
CTDNEP1-211ENST00000575783 BCL9LQ86UU0 1499 aa24.92■■□□□ 1.58
CTDNEP1-211ENST00000575783 XPCQ01831 940 aaPredicted RBP24.91■■□□□ 1.58
CTDNEP1-211ENST00000575783 NPHP3Q7Z494 1330 aa24.89■■□□□ 1.58
CTDNEP1-211ENST00000575783 LAMC1P11047 1609 aa24.89■■□□□ 1.57
CTDNEP1-211ENST00000575783 VGFO15240 615 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms