RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 PRAG1Q86YV5 1406 aa30.25■■■□□ 2.43
CXCL16-203ENST00000574412 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
CXCL16-203ENST00000574412 ZNF142P52746 1687 aaPredicted RBP30.24■■■□□ 2.43
CXCL16-203ENST00000574412 UHRF1BP1Q6BDS2 1440 aa30.24■■■□□ 2.43
CXCL16-203ENST00000574412 RPGRIP1LQ68CZ1 1315 aa30.24■■■□□ 2.43
CXCL16-203ENST00000574412 ADGRF5Q8IZF2 1346 aa30.24■■■□□ 2.43
CXCL16-203ENST00000574412 MYOM2P54296 1465 aa30.23■■■□□ 2.43
CXCL16-203ENST00000574412 RIMS2Q9UQ26 1411 aa30.22■■■□□ 2.43
CXCL16-203ENST00000574412 TRPM1Q7Z4N2 1603 aa30.18■■■□□ 2.42
CXCL16-203ENST00000574412 TMEM2Q9UHN6 1383 aa30.17■■■□□ 2.42
CXCL16-203ENST00000574412 ZFYVE9O95405 1425 aa30.17■■■□□ 2.42
CXCL16-203ENST00000574412 VGFO15240 615 aaPredicted RBP30.15■■■□□ 2.42
CXCL16-203ENST00000574412 STAC3Q96MF2 364 aa30.15■■■□□ 2.42
CXCL16-203ENST00000574412 THEMISQ8N1K5 641 aaPredicted RBP30.14■■■□□ 2.42
CXCL16-203ENST00000574412 NRXN1Q9ULB1 1477 aa30.14■■■□□ 2.42
CXCL16-203ENST00000574412 RALGAPBQ86X10 1494 aa30.13■■■□□ 2.41
CXCL16-203ENST00000574412 PIK3C2GO75747 1445 aa30.11■■■□□ 2.41
CXCL16-203ENST00000574412 SLIT1O75093 1534 aa30.1■■■□□ 2.41
CXCL16-203ENST00000574412 NBPF1Q3BBV0 1214 aa30.1■■■□□ 2.41
CXCL16-203ENST00000574412 ZNF316A6NFI3 1004 aaPredicted RBP30.09■■■□□ 2.41
CXCL16-203ENST00000574412 ARHGAP23Q9P227 1491 aa30.09■■■□□ 2.41
CXCL16-203ENST00000574412 ROCK2O75116 1388 aaKnown RBP30.08■■■□□ 2.41
CXCL16-203ENST00000574412 LTKP29376 864 aa30.08■■■□□ 2.41
CXCL16-203ENST00000574412 CFAP70Q5T0N1 1121 aa30.08■■■□□ 2.41
CXCL16-203ENST00000574412 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.08■■■□□ 2.41
CXCL16-203ENST00000574412 TXNDC2Q86VQ3 553 aa30.07■■■□□ 2.4
CXCL16-203ENST00000574412 KIAA1210Q9ULL0 1709 aa30.06■■■□□ 2.4
CXCL16-203ENST00000574412 HDGFP51858 240 aaKnown RBP30.05■■■□□ 2.4
CXCL16-203ENST00000574412 EID1Q9Y6B2 187 aa30.04■■■□□ 2.4
CXCL16-203ENST00000574412 IQGAP1P46940 1657 aa30.04■■■□□ 2.4
CXCL16-203ENST00000574412 BCANQ96GW7 911 aa30.02■■■□□ 2.4
CXCL16-203ENST00000574412 CARD11Q9BXL7 1154 aa30.02■■■□□ 2.4
CXCL16-203ENST00000574412 NRXN3Q9Y4C0 1643 aa30.01■■■□□ 2.39
CXCL16-203ENST00000574412 SCAF11Q99590 1463 aaKnown RBP30■■■□□ 2.39
CXCL16-203ENST00000574412 LAMC1P11047 1609 aa30■■■□□ 2.39
CXCL16-203ENST00000574412 HIRIP3Q9BW71 556 aaPredicted RBP29.99■■■□□ 2.39
CXCL16-203ENST00000574412 C14orf93Q9H972 538 aaKnown RBP29.99■■■□□ 2.39
CXCL16-203ENST00000574412 ALKQ9UM73 1620 aa29.99■■■□□ 2.39
CXCL16-203ENST00000574412 LMTK3Q96Q04 1460 aa29.98■■■□□ 2.39
CXCL16-203ENST00000574412 HSPA2P54652 639 aa29.97■■■□□ 2.39
CXCL16-203ENST00000574412 TMEM132EQ6IEE7 984 aa29.97■■■□□ 2.39
CXCL16-203ENST00000574412 SETBP1Q9Y6X0 1596 aa29.96■■■□□ 2.39
CXCL16-203ENST00000574412 POLR1AO95602 1720 aaPredicted RBP29.96■■■□□ 2.39
CXCL16-203ENST00000574412 GPRASP1Q5JY77 1395 aa29.96■■■□□ 2.39
CXCL16-203ENST00000574412 PLEKHG1Q9ULL1 1385 aa29.96■■■□□ 2.39
CXCL16-203ENST00000574412 SETD1AO15047 1707 aaKnown RBP29.95■■■□□ 2.39
CXCL16-203ENST00000574412 ANKLE2Q86XL3 938 aa29.95■■■□□ 2.39
CXCL16-203ENST00000574412 ASXL1Q8IXJ9 1541 aa29.93■■■□□ 2.38
CXCL16-203ENST00000574412 ADGRB1O14514 1584 aa29.93■■■□□ 2.38
CXCL16-203ENST00000574412 USP47Q96K76 1375 aa29.93■■■□□ 2.38
CXCL16-203ENST00000574412 HSPA5P11021 654 aaKnown RBP29.91■■■□□ 2.38
CXCL16-203ENST00000574412 EIF4G2P78344 907 aaKnown RBP eCLIP29.91■■■□□ 2.38
CXCL16-203ENST00000574412 NCKAP5LQ9HCH0 1330 aa29.91■■■□□ 2.38
CXCL16-203ENST00000574412 SLC26A8Q96RN1 970 aa29.9■■■□□ 2.38
CXCL16-203ENST00000574412 ADAMTS13Q76LX8 1427 aa29.89■■■□□ 2.37
CXCL16-203ENST00000574412 STK26Q9P289 416 aa29.85■■■□□ 2.37
CXCL16-203ENST00000574412 METP08581 1390 aa29.84■■■□□ 2.37
CXCL16-203ENST00000574412 TRAK1Q9UPV9 953 aa29.83■■■□□ 2.37
CXCL16-203ENST00000574412 NPHP4O75161 1426 aaPredicted RBP29.82■■■□□ 2.36
CXCL16-203ENST00000574412 MED14O60244 1454 aa29.81■■■□□ 2.36
CXCL16-203ENST00000574412 ST20-MTHFSA0A0A6YYL1 179 aa29.8■■■□□ 2.36
CXCL16-203ENST00000574412 YTHDC2Q9H6S0 1430 aaKnown RBP29.8■■■□□ 2.36
CXCL16-203ENST00000574412 DIP2AQ14689 1571 aa29.78■■■□□ 2.36
CXCL16-203ENST00000574412 ARHGEF28Q8N1W1 1705 aaKnown RBP29.78■■■□□ 2.36
CXCL16-203ENST00000574412 STRCQ7RTU9 1775 aa29.78■■■□□ 2.36
CXCL16-203ENST00000574412 TBX22Q9Y458 520 aa29.76■■■□□ 2.35
CXCL16-203ENST00000574412 EIF3AQ14152 1382 aaKnown RBP29.74■■■□□ 2.35
CXCL16-203ENST00000574412 LRPPRCP42704 1394 aaKnown RBP29.72■■■□□ 2.35
CXCL16-203ENST00000574412 DIEXFQ68CQ4 756 aaKnown RBP29.71■■■□□ 2.35
CXCL16-203ENST00000574412 PTPRUQ92729 1446 aa29.71■■■□□ 2.35
CXCL16-203ENST00000574412 QRICH2Q9H0J4 1663 aa29.7■■■□□ 2.35
CXCL16-203ENST00000574412 KNDC1Q76NI1 1749 aa29.69■■■□□ 2.34
CXCL16-203ENST00000574412 SAFB2Q14151 953 aaKnown RBP eCLIP29.68■■■□□ 2.34
CXCL16-203ENST00000574412 CENPJQ9HC77 1338 aaPredicted RBP29.67■■■□□ 2.34
CXCL16-203ENST00000574412 CHD2O14647 1828 aaKnown RBP29.66■■■□□ 2.34
CXCL16-203ENST00000574412 ABCC11Q96J66 1382 aa29.65■■■□□ 2.34
CXCL16-203ENST00000574412 C11orf95C9JLR9 678 aaPredicted RBP29.65■■■□□ 2.34
CXCL16-203ENST00000574412 PRAM1Q96QH2 718 aa29.65■■■□□ 2.34
CXCL16-203ENST00000574412 AMOTL2Q9Y2J4 779 aa29.65■■■□□ 2.34
CXCL16-203ENST00000574412 TESK2Q96S53 571 aa29.64■■■□□ 2.34
CXCL16-203ENST00000574412 WAPLQ7Z5K2 1190 aa29.63■■■□□ 2.33
CXCL16-203ENST00000574412 CPS1P31327 1500 aa29.63■■■□□ 2.33
CXCL16-203ENST00000574412 DLC1Q96QB1 1528 aa29.63■■■□□ 2.33
CXCL16-203ENST00000574412 XRN1Q8IZH2 1706 aaKnown RBP29.63■■■□□ 2.33
CXCL16-203ENST00000574412 POGKQ9P215 609 aa29.63■■■□□ 2.33
CXCL16-203ENST00000574412 PLEKHH1Q9ULM0 1364 aa29.62■■■□□ 2.33
CXCL16-203ENST00000574412 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
CXCL16-203ENST00000574412 ROBO2Q9HCK4 1378 aa29.61■■■□□ 2.33
CXCL16-203ENST00000574412 TECPR2O15040 1411 aa29.61■■■□□ 2.33
CXCL16-203ENST00000574412 PIK3R4Q99570 1358 aa29.6■■■□□ 2.33
CXCL16-203ENST00000574412 POLR3GLQ9BT43 218 aa29.59■■■□□ 2.33
CXCL16-203ENST00000574412 DISP3Q9P2K9 1392 aa29.58■■■□□ 2.33
CXCL16-203ENST00000574412 KCNA6P17658 529 aa29.58■■■□□ 2.33
CXCL16-203ENST00000574412 WASHC2AQ641Q2 1341 aa29.57■■■□□ 2.32
CXCL16-203ENST00000574412 MINK1Q8N4C8 1332 aaPredicted RBP29.56■■■□□ 2.32
CXCL16-203ENST00000574412 KIF7Q2M1P5 1343 aa29.54■■■□□ 2.32
CXCL16-203ENST00000574412 TMF1P82094 1093 aa29.53■■■□□ 2.32
CXCL16-203ENST00000574412 CCDC7Q96M83 1385 aa29.53■■■□□ 2.32
CXCL16-203ENST00000574412 FAM135BQ49AJ0 1406 aa29.53■■■□□ 2.32
CXCL16-203ENST00000574412 PTCH1Q13635 1447 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms