RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 LRP6O75581 1613 aa8.66□□□□□ -1.02
TRIM25-208ENST00000574234 MAP3K1Q13233 1512 aa8.66□□□□□ -1.02
TRIM25-208ENST00000574234 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
TRIM25-208ENST00000574234 GGT6Q6P531 493 aa8.66□□□□□ -1.02
TRIM25-208ENST00000574234 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
TRIM25-208ENST00000574234 ARXQ96QS3 562 aa8.66□□□□□ -1.02
TRIM25-208ENST00000574234 LRP5O75197 1615 aa8.65□□□□□ -1.02
TRIM25-208ENST00000574234 MIA2Q96PC5 1412 aa8.65□□□□□ -1.02
TRIM25-208ENST00000574234 PLEKHG5O94827 1062 aa8.65□□□□□ -1.02
TRIM25-208ENST00000574234 TRIM52Q96A61 297 aa8.65□□□□□ -1.02
TRIM25-208ENST00000574234 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.03
TRIM25-208ENST00000574234 PLEKHH2Q8IVE3 1493 aa8.64□□□□□ -1.03
TRIM25-208ENST00000574234 FGD6Q6ZV73 1430 aa8.64□□□□□ -1.03
TRIM25-208ENST00000574234 KIAA1107Q9UPP5 1409 aa8.64□□□□□ -1.03
TRIM25-208ENST00000574234 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
TRIM25-208ENST00000574234 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
TRIM25-208ENST00000574234 TMEM132AQ24JP5 1023 aa8.64□□□□□ -1.03
TRIM25-208ENST00000574234 TIAM1Q13009 1591 aa8.64□□□□□ -1.03
TRIM25-208ENST00000574234 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
TRIM25-208ENST00000574234 RXRBP28702 533 aa8.63□□□□□ -1.03
TRIM25-208ENST00000574234 ABCC3O15438 1527 aa8.63□□□□□ -1.03
TRIM25-208ENST00000574234 SLIT1O75093 1534 aa8.63□□□□□ -1.03
TRIM25-208ENST00000574234 KDM5AP29375 1690 aaKnown RBP8.62□□□□□ -1.03
TRIM25-208ENST00000574234 FBXO31Q5XUX0 539 aaPredicted RBP8.62□□□□□ -1.03
TRIM25-208ENST00000574234 ARHGAP23Q9P227 1491 aa8.62□□□□□ -1.03
TRIM25-208ENST00000574234 NWD1Q149M9 1564 aa8.61□□□□□ -1.03
TRIM25-208ENST00000574234 CFAP65Q6ZU64 1925 aaKnown RBP8.61□□□□□ -1.03
TRIM25-208ENST00000574234 RANGAP1P46060 587 aaPredicted RBP8.61□□□□□ -1.03
TRIM25-208ENST00000574234 EP400Q96L91 3159 aa8.61□□□□□ -1.03
TRIM25-208ENST00000574234 CCDC18Q5T9S5 1454 aa8.61□□□□□ -1.03
TRIM25-208ENST00000574234 AHDC1Q5TGY3 1603 aaPredicted RBP8.61□□□□□ -1.03
TRIM25-208ENST00000574234 PRDM15P57071 1507 aaPredicted RBP8.6□□□□□ -1.03
TRIM25-208ENST00000574234 NKTRP30414 1462 aaKnown RBP8.6□□□□□ -1.03
TRIM25-208ENST00000574234 GSE1Q14687 1217 aa8.6□□□□□ -1.03
TRIM25-208ENST00000574234 RTEL1-TNFRSF6BF6WH68 1400 aa8.6□□□□□ -1.03
TRIM25-208ENST00000574234 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
TRIM25-208ENST00000574234 ZRANB1Q9UGI0 708 aa8.59□□□□□ -1.03
TRIM25-208ENST00000574234 RGS12O14924 1447 aa8.59□□□□□ -1.03
TRIM25-208ENST00000574234 TMEM94Q12767 1356 aa8.59□□□□□ -1.03
TRIM25-208ENST00000574234 CAMSAP2Q08AD1 1489 aa8.58□□□□□ -1.04
TRIM25-208ENST00000574234 DIP2AQ14689 1571 aa8.58□□□□□ -1.04
TRIM25-208ENST00000574234 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
TRIM25-208ENST00000574234 CHD2O14647 1828 aaKnown RBP8.58□□□□□ -1.04
TRIM25-208ENST00000574234 DHX29Q7Z478 1369 aaKnown RBP8.58□□□□□ -1.04
TRIM25-208ENST00000574234 ARHGAP35Q9NRY4 1499 aa8.57□□□□□ -1.04
TRIM25-208ENST00000574234 EEA1Q15075 1411 aa8.57□□□□□ -1.04
TRIM25-208ENST00000574234 RIOK3O14730 519 aaKnown RBP8.57□□□□□ -1.04
TRIM25-208ENST00000574234 HNRNPMP52272 730 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM25-208ENST00000574234 MEX3CQ5U5Q3 659 aaKnown RBP8.57□□□□□ -1.04
TRIM25-208ENST00000574234 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
TRIM25-208ENST00000574234 ERVK-7P63135 1459 aa8.57□□□□□ -1.04
TRIM25-208ENST00000574234 NCOA2Q15596 1464 aa8.57□□□□□ -1.04
TRIM25-208ENST00000574234 DSG3P32926 999 aa8.56□□□□□ -1.04
TRIM25-208ENST00000574234 CEP152O94986 1710 aa8.56□□□□□ -1.04
TRIM25-208ENST00000574234 ATAD2Q6PL18 1390 aa8.56□□□□□ -1.04
TRIM25-208ENST00000574234 TET3O43151 1660 aa8.56□□□□□ -1.04
TRIM25-208ENST00000574234 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
TRIM25-208ENST00000574234 NUBP1P53384 320 aa8.55□□□□□ -1.04
TRIM25-208ENST00000574234 MSH6P52701 1360 aa8.55□□□□□ -1.04
TRIM25-208ENST00000574234 EIF2AK4Q9P2K8 1649 aaKnown RBP8.54□□□□□ -1.04
TRIM25-208ENST00000574234 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
TRIM25-208ENST00000574234 ZNF777Q9ULD5 760 aaPredicted RBP8.54□□□□□ -1.04
TRIM25-208ENST00000574234 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.54□□□□□ -1.04
TRIM25-208ENST00000574234 PIK3C2BO00750 1634 aa8.54□□□□□ -1.04
TRIM25-208ENST00000574234 NHSL1Q5SYE7 1610 aa8.54□□□□□ -1.04
TRIM25-208ENST00000574234 MBD5Q9P267 1494 aa8.53□□□□□ -1.04
TRIM25-208ENST00000574234 LTKP29376 864 aa8.53□□□□□ -1.04
TRIM25-208ENST00000574234 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
TRIM25-208ENST00000574234 KCNA6P17658 529 aa8.52□□□□□ -1.05
TRIM25-208ENST00000574234 RBM6P78332 1123 aaKnown RBP8.52□□□□□ -1.05
TRIM25-208ENST00000574234 CASKIN1Q8WXD9 1431 aa8.52□□□□□ -1.05
TRIM25-208ENST00000574234 KIF3BO15066 747 aa8.51□□□□□ -1.05
TRIM25-208ENST00000574234 TXNDC2Q86VQ3 553 aa8.51□□□□□ -1.05
TRIM25-208ENST00000574234 CCDC125Q86Z20 511 aa8.51□□□□□ -1.05
TRIM25-208ENST00000574234 AFF2P51816 1311 aa8.51□□□□□ -1.05
TRIM25-208ENST00000574234 MROH1Q8NDA8 1641 aa8.51□□□□□ -1.05
TRIM25-208ENST00000574234 NUTM2BA6NNL0 878 aaPredicted RBP8.5□□□□□ -1.05
TRIM25-208ENST00000574234 NUTM2EB1AL46 878 aaPredicted RBP8.5□□□□□ -1.05
TRIM25-208ENST00000574234 STK25O00506 426 aa8.5□□□□□ -1.05
TRIM25-208ENST00000574234 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
TRIM25-208ENST00000574234 DCAF8Q5TAQ9 597 aa8.5□□□□□ -1.05
TRIM25-208ENST00000574234 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
TRIM25-208ENST00000574234 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
TRIM25-208ENST00000574234 NUTM2AQ8IVF1 878 aaPredicted RBP8.5□□□□□ -1.05
TRIM25-208ENST00000574234 EID1Q9Y6B2 187 aa8.5□□□□□ -1.05
TRIM25-208ENST00000574234 NCOA3Q9Y6Q9 1424 aa8.5□□□□□ -1.05
TRIM25-208ENST00000574234 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
TRIM25-208ENST00000574234 CFDP1Q9UEE9 299 aaPredicted RBP8.49□□□□□ -1.05
TRIM25-208ENST00000574234 FYCO1Q9BQS8 1478 aa8.49□□□□□ -1.05
TRIM25-208ENST00000574234 SPHKAPQ2M3C7 1700 aa8.49□□□□□ -1.05
TRIM25-208ENST00000574234 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
TRIM25-208ENST00000574234 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
TRIM25-208ENST00000574234 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
TRIM25-208ENST00000574234 SGIP1Q9BQI5 828 aa8.48□□□□□ -1.05
TRIM25-208ENST00000574234 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
TRIM25-208ENST00000574234 EFCAB6Q5THR3 1501 aa8.48□□□□□ -1.05
TRIM25-208ENST00000574234 MAST1Q9Y2H9 1570 aa8.48□□□□□ -1.05
TRIM25-208ENST00000574234 SETD5Q9C0A6 1442 aa8.47□□□□□ -1.05
TRIM25-208ENST00000574234 CCDC141Q6ZP82 1450 aa8.47□□□□□ -1.05
TRIM25-208ENST00000574234 CHRM1P11229 460 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms