RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 RICTORQ6R327 1708 aa22.05■■□□□ 1.12
POLR2A-201ENST00000572844 CDCA8Q53HL2 280 aa22.05■■□□□ 1.12
POLR2A-201ENST00000572844 GLI2P10070 1586 aa22.05■■□□□ 1.12
POLR2A-201ENST00000572844 ZMYM4Q5VZL5 1548 aa22.05■■□□□ 1.12
POLR2A-201ENST00000572844 INSRP06213 1382 aa22.04■■□□□ 1.12
POLR2A-201ENST00000572844 RIMBP3CA6NJZ7 1639 aa22.04■■□□□ 1.12
POLR2A-201ENST00000572844 RIMBP3BA6NNM3 1639 aa22.04■■□□□ 1.12
POLR2A-201ENST00000572844 RIMBP3Q9UFD9 1639 aa22.04■■□□□ 1.12
POLR2A-201ENST00000572844 SLC24A1O60721 1099 aa22.04■■□□□ 1.12
POLR2A-201ENST00000572844 ABCC3O15438 1527 aa22.03■■□□□ 1.12
POLR2A-201ENST00000572844 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
POLR2A-201ENST00000572844 PPLO60437 1756 aa22.02■■□□□ 1.12
POLR2A-201ENST00000572844 CNGB1Q14028 1251 aaPredicted RBP22.02■■□□□ 1.12
POLR2A-201ENST00000572844 PANK3Q9H999 370 aa22.02■■□□□ 1.12
POLR2A-201ENST00000572844 DIP2CQ9Y2E4 1556 aa22.02■■□□□ 1.12
POLR2A-201ENST00000572844 NPATQ14207 1427 aa22.02■■□□□ 1.12
POLR2A-201ENST00000572844 CAMSAP1Q5T5Y3 1602 aa22.02■■□□□ 1.12
POLR2A-201ENST00000572844 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.12
POLR2A-201ENST00000572844 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.11
POLR2A-201ENST00000572844 SETBP1Q9Y6X0 1596 aa22.02■■□□□ 1.11
POLR2A-201ENST00000572844 KDM5AP29375 1690 aaKnown RBP22.01■■□□□ 1.11
POLR2A-201ENST00000572844 ZC3H13Q5T200 1668 aaKnown RBP22■■□□□ 1.11
POLR2A-201ENST00000572844 MYOM1P52179 1685 aa22■■□□□ 1.11
POLR2A-201ENST00000572844 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
POLR2A-201ENST00000572844 CFAP65Q6ZU64 1925 aaKnown RBP21.96■■□□□ 1.11
POLR2A-201ENST00000572844 PIK3C2BO00750 1634 aa21.96■■□□□ 1.11
POLR2A-201ENST00000572844 ADGRF5Q8IZF2 1346 aa21.95■■□□□ 1.11
POLR2A-201ENST00000572844 NOS1P29475 1434 aa21.95■■□□□ 1.1
POLR2A-201ENST00000572844 RNF123Q5XPI4 1314 aa21.94■■□□□ 1.1
POLR2A-201ENST00000572844 RPGRIP1LQ68CZ1 1315 aa21.94■■□□□ 1.1
POLR2A-201ENST00000572844 ARHGAP31Q2M1Z3 1444 aa21.94■■□□□ 1.1
POLR2A-201ENST00000572844 SIGLEC1Q9BZZ2 1709 aa21.94■■□□□ 1.1
POLR2A-201ENST00000572844 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
POLR2A-201ENST00000572844 SBNO2Q9Y2G9 1366 aa21.94■■□□□ 1.1
POLR2A-201ENST00000572844 NPC1L1Q9UHC9 1359 aa21.93■■□□□ 1.1
POLR2A-201ENST00000572844 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
POLR2A-201ENST00000572844 GGT6Q6P531 493 aa21.92■■□□□ 1.1
POLR2A-201ENST00000572844 ASXL1Q8IXJ9 1541 aa21.91■■□□□ 1.1
POLR2A-201ENST00000572844 PIK3C2GO75747 1445 aa21.9■■□□□ 1.1
POLR2A-201ENST00000572844 CC2D1BQ5T0F9 858 aaKnown RBP21.9■■□□□ 1.1
POLR2A-201ENST00000572844 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
POLR2A-201ENST00000572844 BLMP54132 1417 aaPredicted RBP21.9■■□□□ 1.1
POLR2A-201ENST00000572844 RAPGEF3O95398 923 aa21.89■■□□□ 1.1
POLR2A-201ENST00000572844 IRX6P78412 446 aaPredicted RBP21.89■■□□□ 1.09
POLR2A-201ENST00000572844 KNSTRNQ9Y448 316 aa21.89■■□□□ 1.09
POLR2A-201ENST00000572844 PDE3BQ13370 1112 aa21.87■■□□□ 1.09
POLR2A-201ENST00000572844 AMER1Q5JTC6 1135 aaPredicted RBP21.87■■□□□ 1.09
POLR2A-201ENST00000572844 ADGRB1O14514 1584 aa21.86■■□□□ 1.09
POLR2A-201ENST00000572844 C14orf93Q9H972 538 aaKnown RBP21.85■■□□□ 1.09
POLR2A-201ENST00000572844 DIP2BQ9P265 1576 aa21.84■■□□□ 1.09
POLR2A-201ENST00000572844 NEXMIFQ5QGS0 1516 aa21.82■■□□□ 1.08
POLR2A-201ENST00000572844 QRICH2Q9H0J4 1663 aa21.82■■□□□ 1.08
POLR2A-201ENST00000572844 YEATS2Q9ULM3 1422 aa21.82■■□□□ 1.08
POLR2A-201ENST00000572844 REREQ9P2R6 1566 aa21.81■■□□□ 1.08
POLR2A-201ENST00000572844 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
POLR2A-201ENST00000572844 PREX1Q8TCU6 1659 aa21.8■■□□□ 1.08
POLR2A-201ENST00000572844 PPP2R1AP30153 589 aa21.79■■□□□ 1.08
POLR2A-201ENST00000572844 ZFYVE9O95405 1425 aa21.79■■□□□ 1.08
POLR2A-201ENST00000572844 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
POLR2A-201ENST00000572844 SLC52A1Q9NWF4 448 aa21.76■■□□□ 1.07
POLR2A-201ENST00000572844 VGFO15240 615 aaPredicted RBP21.75■■□□□ 1.07
POLR2A-201ENST00000572844 ARHGEF28Q8N1W1 1705 aaKnown RBP21.75■■□□□ 1.07
POLR2A-201ENST00000572844 AGLP35573 1532 aa21.74■■□□□ 1.07
POLR2A-201ENST00000572844 MYO5BQ9ULV0 1848 aa21.73■■□□□ 1.07
POLR2A-201ENST00000572844 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
POLR2A-201ENST00000572844 PUS7Q96PZ0 661 aaKnown RBP21.73■■□□□ 1.07
POLR2A-201ENST00000572844 USP32Q8NFA0 1604 aa21.72■■□□□ 1.07
POLR2A-201ENST00000572844 FAM69CQ0P6D2 419 aa21.7■■□□□ 1.06
POLR2A-201ENST00000572844 TSPOAP1O95153 1857 aa21.7■■□□□ 1.06
POLR2A-201ENST00000572844 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
POLR2A-201ENST00000572844 IDI1Q13907 227 aa21.69■■□□□ 1.06
POLR2A-201ENST00000572844 ADAMTS8Q9UP79 889 aa21.68■■□□□ 1.06
POLR2A-201ENST00000572844 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
POLR2A-201ENST00000572844 RBM19Q9Y4C8 960 aaKnown RBP21.68■■□□□ 1.06
POLR2A-201ENST00000572844 WDR43Q15061 677 aaKnown RBP eCLIP21.67■■□□□ 1.06
POLR2A-201ENST00000572844 CARD14Q9BXL6 1004 aa21.67■■□□□ 1.06
POLR2A-201ENST00000572844 RCAN3Q9UKA8 241 aa21.67■■□□□ 1.06
POLR2A-201ENST00000572844 B4GALNT3Q6L9W6 998 aa21.67■■□□□ 1.06
POLR2A-201ENST00000572844 SENP3-EIF4A1A0A087X0R7 540 aa21.66■■□□□ 1.06
POLR2A-201ENST00000572844 RRP1P56182 461 aaKnown RBP21.65■■□□□ 1.06
POLR2A-201ENST00000572844 TMEM132EQ6IEE7 984 aa21.64■■□□□ 1.05
POLR2A-201ENST00000572844 TULP4Q9NRJ4 1543 aa21.62■■□□□ 1.05
POLR2A-201ENST00000572844 SALL2Q9Y467 1007 aaPredicted RBP21.61■■□□□ 1.05
POLR2A-201ENST00000572844 POLR3AO14802 1390 aaPredicted RBP21.6■■□□□ 1.05
POLR2A-201ENST00000572844 EVC2Q86UK5 1308 aa21.6■■□□□ 1.05
POLR2A-201ENST00000572844 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
POLR2A-201ENST00000572844 NSD3Q9BZ95 1437 aa21.6■■□□□ 1.05
POLR2A-201ENST00000572844 CLTCQ00610 1675 aaKnown RBP21.59■■□□□ 1.05
POLR2A-201ENST00000572844 ZNF521Q96K83 1311 aa21.59■■□□□ 1.05
POLR2A-201ENST00000572844 KIF13AQ9H1H9 1805 aa21.59■■□□□ 1.05
POLR2A-201ENST00000572844 SPATA31D1Q6ZQQ2 1576 aa21.58■■□□□ 1.05
POLR2A-201ENST00000572844 NGEFQ8N5V2 710 aa21.58■■□□□ 1.05
POLR2A-201ENST00000572844 CCDC136Q96JN2 1154 aa21.57■■□□□ 1.04
POLR2A-201ENST00000572844 PLEKHH1Q9ULM0 1364 aa21.57■■□□□ 1.04
POLR2A-201ENST00000572844 NINLQ9Y2I6 1382 aa21.57■■□□□ 1.04
POLR2A-201ENST00000572844 ARHGEF40Q8TER5 1519 aa21.56■■□□□ 1.04
POLR2A-201ENST00000572844 NSD2O96028 1365 aa21.55■■□□□ 1.04
POLR2A-201ENST00000572844 ANKRD36BQ8N2N9 1353 aa21.54■■□□□ 1.04
POLR2A-201ENST00000572844 SLC12A5Q9H2X9 1139 aa21.54■■□□□ 1.04
POLR2A-201ENST00000572844 SHPRHQ149N8 1683 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms