RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
RPAIN-208ENST00000571043 RALGAPBQ86X10 1494 aa24.25■■□□□ 1.47
RPAIN-208ENST00000571043 RPGRIP1LQ68CZ1 1315 aa24.25■■□□□ 1.47
RPAIN-208ENST00000571043 CEP170BQ9Y4F5 1589 aaPredicted RBP24.24■■□□□ 1.47
RPAIN-208ENST00000571043 ZNF326Q5BKZ1 582 aaKnown RBP24.24■■□□□ 1.47
RPAIN-208ENST00000571043 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
RPAIN-208ENST00000571043 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
RPAIN-208ENST00000571043 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
RPAIN-208ENST00000571043 WASHC2AQ641Q2 1341 aa24.22■■□□□ 1.47
RPAIN-208ENST00000571043 STAC3Q96MF2 364 aa24.22■■□□□ 1.47
RPAIN-208ENST00000571043 PPLO60437 1756 aa24.18■■□□□ 1.46
RPAIN-208ENST00000571043 IFT172Q9UG01 1749 aa24.18■■□□□ 1.46
RPAIN-208ENST00000571043 USP47Q96K76 1375 aa24.17■■□□□ 1.46
RPAIN-208ENST00000571043 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
RPAIN-208ENST00000571043 CCDC7Q96M83 1385 aa24.16■■□□□ 1.46
RPAIN-208ENST00000571043 TMEM2Q9UHN6 1383 aa24.16■■□□□ 1.46
RPAIN-208ENST00000571043 NEXMIFQ5QGS0 1516 aa24.16■■□□□ 1.46
RPAIN-208ENST00000571043 ANP32CO43423 234 aa24.16■■□□□ 1.46
RPAIN-208ENST00000571043 PRAG1Q86YV5 1406 aa24.16■■□□□ 1.46
RPAIN-208ENST00000571043 HDGFP51858 240 aaKnown RBP24.15■■□□□ 1.46
RPAIN-208ENST00000571043 VGFO15240 615 aaPredicted RBP24.15■■□□□ 1.46
RPAIN-208ENST00000571043 YTHDC1Q96MU7 727 aaKnown RBP24.15■■□□□ 1.46
RPAIN-208ENST00000571043 ZFYVE9O95405 1425 aa24.14■■□□□ 1.45
RPAIN-208ENST00000571043 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
RPAIN-208ENST00000571043 ARHGAP23Q9P227 1491 aa24.14■■□□□ 1.45
RPAIN-208ENST00000571043 SLIT1O75093 1534 aa24.14■■□□□ 1.45
RPAIN-208ENST00000571043 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.13■■□□□ 1.45
RPAIN-208ENST00000571043 CARD11Q9BXL7 1154 aa24.13■■□□□ 1.45
RPAIN-208ENST00000571043 C11orf95C9JLR9 678 aaPredicted RBP24.11■■□□□ 1.45
RPAIN-208ENST00000571043 CCER2I3L3R5 266 aa24.11■■□□□ 1.45
RPAIN-208ENST00000571043 MYOM2P54296 1465 aa24.11■■□□□ 1.45
RPAIN-208ENST00000571043 NUTM2DQ5VT03 806 aaPredicted RBP24.1■■□□□ 1.45
RPAIN-208ENST00000571043 LTKP29376 864 aa24.1■■□□□ 1.45
RPAIN-208ENST00000571043 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
RPAIN-208ENST00000571043 LMTK3Q96Q04 1460 aa24.09■■□□□ 1.45
RPAIN-208ENST00000571043 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
RPAIN-208ENST00000571043 EID1Q9Y6B2 187 aa24.09■■□□□ 1.45
RPAIN-208ENST00000571043 NRXN1Q9ULB1 1477 aa24.08■■□□□ 1.45
RPAIN-208ENST00000571043 ROCK2O75116 1388 aaKnown RBP24.08■■□□□ 1.45
RPAIN-208ENST00000571043 GPRASP1Q5JY77 1395 aa24.08■■□□□ 1.45
RPAIN-208ENST00000571043 KIF7Q2M1P5 1343 aa24.07■■□□□ 1.44
RPAIN-208ENST00000571043 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
RPAIN-208ENST00000571043 SCAF11Q99590 1463 aaKnown RBP24.02■■□□□ 1.44
RPAIN-208ENST00000571043 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
RPAIN-208ENST00000571043 PIK3C2GO75747 1445 aa24.02■■□□□ 1.44
RPAIN-208ENST00000571043 HSPA2P54652 639 aa24.02■■□□□ 1.44
RPAIN-208ENST00000571043 C14orf93Q9H972 538 aaKnown RBP24■■□□□ 1.43
RPAIN-208ENST00000571043 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
RPAIN-208ENST00000571043 LAMC1P11047 1609 aa23.99■■□□□ 1.43
RPAIN-208ENST00000571043 POLR1AO95602 1720 aaPredicted RBP23.97■■□□□ 1.43
RPAIN-208ENST00000571043 KIAA1210Q9ULL0 1709 aa23.97■■□□□ 1.43
RPAIN-208ENST00000571043 CFAP70Q5T0N1 1121 aa23.97■■□□□ 1.43
RPAIN-208ENST00000571043 ST20-MTHFSA0A0A6YYL1 179 aa23.96■■□□□ 1.43
RPAIN-208ENST00000571043 NBPF1Q3BBV0 1214 aa23.96■■□□□ 1.43
RPAIN-208ENST00000571043 NCKAP5LQ9HCH0 1330 aa23.96■■□□□ 1.43
RPAIN-208ENST00000571043 SETBP1Q9Y6X0 1596 aa23.95■■□□□ 1.42
RPAIN-208ENST00000571043 MED14O60244 1454 aa23.95■■□□□ 1.42
RPAIN-208ENST00000571043 NRXN3Q9Y4C0 1643 aa23.94■■□□□ 1.42
RPAIN-208ENST00000571043 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
RPAIN-208ENST00000571043 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
RPAIN-208ENST00000571043 BCANQ96GW7 911 aa23.93■■□□□ 1.42
RPAIN-208ENST00000571043 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
RPAIN-208ENST00000571043 ADAMTS13Q76LX8 1427 aa23.92■■□□□ 1.42
RPAIN-208ENST00000571043 STRCQ7RTU9 1775 aa23.91■■□□□ 1.42
RPAIN-208ENST00000571043 IQGAP1P46940 1657 aa23.91■■□□□ 1.42
RPAIN-208ENST00000571043 TBX22Q9Y458 520 aa23.9■■□□□ 1.42
RPAIN-208ENST00000571043 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
RPAIN-208ENST00000571043 NPHP4O75161 1426 aaPredicted RBP23.9■■□□□ 1.42
RPAIN-208ENST00000571043 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.42
RPAIN-208ENST00000571043 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
RPAIN-208ENST00000571043 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
RPAIN-208ENST00000571043 PRKRIP1Q9H875 184 aaPredicted RBP23.85■■□□□ 1.41
RPAIN-208ENST00000571043 ADGRB1O14514 1584 aa23.85■■□□□ 1.41
RPAIN-208ENST00000571043 DIP2AQ14689 1571 aa23.84■■□□□ 1.41
RPAIN-208ENST00000571043 METP08581 1390 aa23.83■■□□□ 1.41
RPAIN-208ENST00000571043 ASXL1Q8IXJ9 1541 aa23.82■■□□□ 1.4
RPAIN-208ENST00000571043 TESK2Q96S53 571 aa23.81■■□□□ 1.4
RPAIN-208ENST00000571043 POLR3GLQ9BT43 218 aa23.8■■□□□ 1.4
RPAIN-208ENST00000571043 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
RPAIN-208ENST00000571043 DMRT2Q9Y5R5 561 aa23.79■■□□□ 1.4
RPAIN-208ENST00000571043 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
RPAIN-208ENST00000571043 LRPPRCP42704 1394 aaKnown RBP23.76■■□□□ 1.39
RPAIN-208ENST00000571043 ABCC11Q96J66 1382 aa23.76■■□□□ 1.39
RPAIN-208ENST00000571043 CHD2O14647 1828 aaKnown RBP23.76■■□□□ 1.39
RPAIN-208ENST00000571043 GTF3C3Q9Y5Q9 886 aa23.76■■□□□ 1.39
RPAIN-208ENST00000571043 TMF1P82094 1093 aa23.75■■□□□ 1.39
RPAIN-208ENST00000571043 PTPRUQ92729 1446 aa23.75■■□□□ 1.39
RPAIN-208ENST00000571043 STK26Q9P289 416 aa23.74■■□□□ 1.39
RPAIN-208ENST00000571043 TRAK1Q9UPV9 953 aa23.74■■□□□ 1.39
RPAIN-208ENST00000571043 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
RPAIN-208ENST00000571043 EIF3AQ14152 1382 aaKnown RBP23.73■■□□□ 1.39
RPAIN-208ENST00000571043 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
RPAIN-208ENST00000571043 TECPR2O15040 1411 aa23.71■■□□□ 1.39
RPAIN-208ENST00000571043 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
RPAIN-208ENST00000571043 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
RPAIN-208ENST00000571043 KCNA6P17658 529 aa23.7■■□□□ 1.38
RPAIN-208ENST00000571043 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
RPAIN-208ENST00000571043 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
RPAIN-208ENST00000571043 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
RPAIN-208ENST00000571043 ARHGEF28Q8N1W1 1705 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms