RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 KIF7Q2M1P5 1343 aa15.33■□□□□ 0.04
PDXDC1-216ENST00000569715 ST20-MTHFSA0A0A6YYL1 179 aa15.33■□□□□ 0.04
PDXDC1-216ENST00000569715 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
PDXDC1-216ENST00000569715 NRXN1Q9ULB1 1477 aa15.32■□□□□ 0.04
PDXDC1-216ENST00000569715 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
PDXDC1-216ENST00000569715 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
PDXDC1-216ENST00000569715 IQGAP1P46940 1657 aa15.31■□□□□ 0.04
PDXDC1-216ENST00000569715 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
PDXDC1-216ENST00000569715 SLC52A1Q9NWF4 448 aa15.3■□□□□ 0.04
PDXDC1-216ENST00000569715 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
PDXDC1-216ENST00000569715 NUTM2DQ5VT03 806 aaPredicted RBP15.29■□□□□ 0.04
PDXDC1-216ENST00000569715 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
PDXDC1-216ENST00000569715 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
PDXDC1-216ENST00000569715 PIK3C2GO75747 1445 aa15.28■□□□□ 0.04
PDXDC1-216ENST00000569715 RPGRIP1LQ68CZ1 1315 aa15.26■□□□□ 0.03
PDXDC1-216ENST00000569715 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
PDXDC1-216ENST00000569715 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
PDXDC1-216ENST00000569715 SCAF11Q99590 1463 aaKnown RBP15.24■□□□□ 0.03
PDXDC1-216ENST00000569715 TESK2Q96S53 571 aa15.24■□□□□ 0.03
PDXDC1-216ENST00000569715 C3P01024 1663 aa15.23■□□□□ 0.03
PDXDC1-216ENST00000569715 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
PDXDC1-216ENST00000569715 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
PDXDC1-216ENST00000569715 ADGRB1O14514 1584 aa15.22■□□□□ 0.03
PDXDC1-216ENST00000569715 SETBP1Q9Y6X0 1596 aa15.22■□□□□ 0.03
PDXDC1-216ENST00000569715 DISP3Q9P2K9 1392 aa15.21■□□□□ 0.03
PDXDC1-216ENST00000569715 CEBPAP49715 358 aaPredicted RBP15.21■□□□□ 0.03
PDXDC1-216ENST00000569715 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.02
PDXDC1-216ENST00000569715 TNRQ92752 1358 aa15.21■□□□□ 0.02
PDXDC1-216ENST00000569715 C14orf93Q9H972 538 aaKnown RBP15.2■□□□□ 0.02
PDXDC1-216ENST00000569715 VGFO15240 615 aaPredicted RBP15.2■□□□□ 0.02
PDXDC1-216ENST00000569715 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
PDXDC1-216ENST00000569715 ANP32CO43423 234 aa15.19■□□□□ 0.02
PDXDC1-216ENST00000569715 TMEM132EQ6IEE7 984 aa15.19■□□□□ 0.02
PDXDC1-216ENST00000569715 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
PDXDC1-216ENST00000569715 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
PDXDC1-216ENST00000569715 ASXL1Q8IXJ9 1541 aa15.18■□□□□ 0.02
PDXDC1-216ENST00000569715 UBR1Q8IWV7 1749 aa15.17■□□□□ 0.02
PDXDC1-216ENST00000569715 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
PDXDC1-216ENST00000569715 MYO3AQ8NEV4 1616 aa15.16■□□□□ 0.02
PDXDC1-216ENST00000569715 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
PDXDC1-216ENST00000569715 RIMS1Q86UR5 1692 aaKnown RBP15.15■□□□□ 0.02
PDXDC1-216ENST00000569715 TRAK1Q9UPV9 953 aa15.14■□□□□ 0.01
PDXDC1-216ENST00000569715 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
PDXDC1-216ENST00000569715 TMF1P82094 1093 aa15.13■□□□□ 0.01
PDXDC1-216ENST00000569715 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
PDXDC1-216ENST00000569715 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
PDXDC1-216ENST00000569715 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
PDXDC1-216ENST00000569715 SETD1AO15047 1707 aaKnown RBP15.12■□□□□ 0.01
PDXDC1-216ENST00000569715 ADAMTSL3P82987 1691 aa15.11■□□□□ 0.01
PDXDC1-216ENST00000569715 NRXN3Q9Y4C0 1643 aa15.11■□□□□ 0.01
PDXDC1-216ENST00000569715 NLRP1Q9C000 1473 aa15.11■□□□□ 0.01
PDXDC1-216ENST00000569715 PTPRMP28827 1452 aa15.11■□□□□ 0.01
PDXDC1-216ENST00000569715 MYOM1P52179 1685 aa15.09■□□□□ 0.01
PDXDC1-216ENST00000569715 CENPJQ9HC77 1338 aaPredicted RBP15.09■□□□□ 0.01
PDXDC1-216ENST00000569715 CNGB1Q14028 1251 aaPredicted RBP15.09■□□□□ 0.01
PDXDC1-216ENST00000569715 PRKRIP1Q9H875 184 aaPredicted RBP15.09■□□□□ 0.01
PDXDC1-216ENST00000569715 TMEM2Q9UHN6 1383 aa15.08■□□□□ 0.01
PDXDC1-216ENST00000569715 CCER2I3L3R5 266 aa15.08■□□□□ 0
PDXDC1-216ENST00000569715 STK26Q9P289 416 aa15.07■□□□□ 0
PDXDC1-216ENST00000569715 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
PDXDC1-216ENST00000569715 YTHDC2Q9H6S0 1430 aaKnown RBP15.06■□□□□ 0
PDXDC1-216ENST00000569715 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
PDXDC1-216ENST00000569715 CCDC184Q52MB2 194 aa15.04■□□□□ -0
PDXDC1-216ENST00000569715 LTKP29376 864 aa15.03■□□□□ -0
PDXDC1-216ENST00000569715 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
PDXDC1-216ENST00000569715 PANK3Q9H999 370 aa15.03■□□□□ -0
PDXDC1-216ENST00000569715 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
PDXDC1-216ENST00000569715 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02■□□□□ -0
PDXDC1-216ENST00000569715 PER1O15534 1290 aaPredicted RBP15.02□□□□□ -0.01
PDXDC1-216ENST00000569715 CDCA8Q53HL2 280 aa15.02□□□□□ -0.01
PDXDC1-216ENST00000569715 METP08581 1390 aa15.02□□□□□ -0.01
PDXDC1-216ENST00000569715 SLIT1O75093 1534 aa15.02□□□□□ -0.01
PDXDC1-216ENST00000569715 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
PDXDC1-216ENST00000569715 PRAM1Q96QH2 718 aa15□□□□□ -0.01
PDXDC1-216ENST00000569715 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
PDXDC1-216ENST00000569715 HDGFP51858 240 aaKnown RBP14.99□□□□□ -0.01
PDXDC1-216ENST00000569715 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
PDXDC1-216ENST00000569715 LRPPRCP42704 1394 aaKnown RBP14.99□□□□□ -0.01
PDXDC1-216ENST00000569715 BCANQ96GW7 911 aa14.99□□□□□ -0.01
PDXDC1-216ENST00000569715 PLEKHG1Q9ULL1 1385 aa14.98□□□□□ -0.01
PDXDC1-216ENST00000569715 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
PDXDC1-216ENST00000569715 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
PDXDC1-216ENST00000569715 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
PDXDC1-216ENST00000569715 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
PDXDC1-216ENST00000569715 PLEKHH1Q9ULM0 1364 aa14.97□□□□□ -0.01
PDXDC1-216ENST00000569715 KNDC1Q76NI1 1749 aa14.96□□□□□ -0.01
PDXDC1-216ENST00000569715 MINK1Q8N4C8 1332 aaPredicted RBP14.96□□□□□ -0.01
PDXDC1-216ENST00000569715 THEMISQ8N1K5 641 aaPredicted RBP14.96□□□□□ -0.01
PDXDC1-216ENST00000569715 POGKQ9P215 609 aa14.96□□□□□ -0.01
PDXDC1-216ENST00000569715 WAPLQ7Z5K2 1190 aa14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 ABCC11Q96J66 1382 aa14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 CC2D1BQ5T0F9 858 aaKnown RBP14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 EID1Q9Y6B2 187 aa14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 EVC2Q86UK5 1308 aa14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 KTN1Q86UP2 1357 aaKnown RBP14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 MED14O60244 1454 aa14.95□□□□□ -0.02
PDXDC1-216ENST00000569715 PARD3Q8TEW0 1356 aa14.94□□□□□ -0.02
PDXDC1-216ENST00000569715 SETD1BQ9UPS6 1966 aaKnown RBP14.94□□□□□ -0.02
PDXDC1-216ENST00000569715 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms