RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
EDC3-216ENST00000569561 SLC4A1APQ9BWU0 796 aaKnown RBP24.96■■□□□ 1.59
EDC3-216ENST00000569561 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.58
EDC3-216ENST00000569561 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
EDC3-216ENST00000569561 SLC26A8Q96RN1 970 aa24.94■■□□□ 1.58
EDC3-216ENST00000569561 ADAMTS13Q76LX8 1427 aa24.94■■□□□ 1.58
EDC3-216ENST00000569561 ALKQ9UM73 1620 aa24.94■■□□□ 1.58
EDC3-216ENST00000569561 NWD1Q149M9 1564 aa24.93■■□□□ 1.58
EDC3-216ENST00000569561 HDGFP51858 240 aaKnown RBP24.92■■□□□ 1.58
EDC3-216ENST00000569561 UBAP1LF5GYI3 381 aa24.9■■□□□ 1.58
EDC3-216ENST00000569561 KCNA6P17658 529 aa24.9■■□□□ 1.58
EDC3-216ENST00000569561 PPP1R15AO75807 674 aaPredicted RBP24.89■■□□□ 1.58
EDC3-216ENST00000569561 NEXMIFQ5QGS0 1516 aa24.88■■□□□ 1.57
EDC3-216ENST00000569561 RAB3GAP2Q9H2M9 1393 aa24.88■■□□□ 1.57
EDC3-216ENST00000569561 NUTM2DQ5VT03 806 aaPredicted RBP24.87■■□□□ 1.57
EDC3-216ENST00000569561 MPHOSPH9Q99550 1183 aa24.87■■□□□ 1.57
EDC3-216ENST00000569561 TBX22Q9Y458 520 aa24.87■■□□□ 1.57
EDC3-216ENST00000569561 DIP2AQ14689 1571 aa24.87■■□□□ 1.57
EDC3-216ENST00000569561 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
EDC3-216ENST00000569561 FOXD1Q16676 465 aa24.86■■□□□ 1.57
EDC3-216ENST00000569561 ACIN1Q9UKV3 1341 aaKnown RBP24.86■■□□□ 1.57
EDC3-216ENST00000569561 NRXN3Q9Y4C0 1643 aa24.85■■□□□ 1.57
EDC3-216ENST00000569561 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
EDC3-216ENST00000569561 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
EDC3-216ENST00000569561 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
EDC3-216ENST00000569561 TMEM94Q12767 1356 aa24.81■■□□□ 1.56
EDC3-216ENST00000569561 PIK3R4Q99570 1358 aa24.81■■□□□ 1.56
EDC3-216ENST00000569561 TOM1O60784 492 aa24.81■■□□□ 1.56
EDC3-216ENST00000569561 CHD2O14647 1828 aaKnown RBP24.8■■□□□ 1.56
EDC3-216ENST00000569561 KIF1BO60333 1816 aa24.8■■□□□ 1.56
EDC3-216ENST00000569561 BCANQ96GW7 911 aa24.8■■□□□ 1.56
EDC3-216ENST00000569561 ZNF326Q5BKZ1 582 aaKnown RBP24.79■■□□□ 1.56
EDC3-216ENST00000569561 SPATA31E1Q6ZUB1 1445 aa24.78■■□□□ 1.56
EDC3-216ENST00000569561 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
EDC3-216ENST00000569561 CCDC144AA2RUR9 1427 aa24.76■■□□□ 1.55
EDC3-216ENST00000569561 HRCP23327 699 aa24.75■■□□□ 1.55
EDC3-216ENST00000569561 RPGRIP1LQ68CZ1 1315 aa24.74■■□□□ 1.55
EDC3-216ENST00000569561 PROSER2Q86WR7 435 aaPredicted RBP24.73■■□□□ 1.55
EDC3-216ENST00000569561 PIP4K2BP78356 416 aa24.72■■□□□ 1.55
EDC3-216ENST00000569561 METP08581 1390 aa24.71■■□□□ 1.55
EDC3-216ENST00000569561 RBM33Q96EV2 1170 aaKnown RBP24.71■■□□□ 1.55
EDC3-216ENST00000569561 XRN1Q8IZH2 1706 aaKnown RBP24.71■■□□□ 1.55
EDC3-216ENST00000569561 NCOA3Q9Y6Q9 1424 aa24.7■■□□□ 1.55
EDC3-216ENST00000569561 PPLO60437 1756 aa24.7■■□□□ 1.54
EDC3-216ENST00000569561 SETD1AO15047 1707 aaKnown RBP24.67■■□□□ 1.54
EDC3-216ENST00000569561 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
EDC3-216ENST00000569561 HSPA1LP34931 641 aa24.66■■□□□ 1.54
EDC3-216ENST00000569561 AMOTL2Q9Y2J4 779 aa24.66■■□□□ 1.54
EDC3-216ENST00000569561 ANKRD30BQ9BXX2 1392 aa24.66■■□□□ 1.54
EDC3-216ENST00000569561 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
EDC3-216ENST00000569561 PRAG1Q86YV5 1406 aa24.63■■□□□ 1.53
EDC3-216ENST00000569561 MSH6P52701 1360 aa24.63■■□□□ 1.53
EDC3-216ENST00000569561 IFT172Q9UG01 1749 aa24.63■■□□□ 1.53
EDC3-216ENST00000569561 FAM135BQ49AJ0 1406 aa24.62■■□□□ 1.53
EDC3-216ENST00000569561 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
EDC3-216ENST00000569561 RGL3Q3MIN7 710 aa24.59■■□□□ 1.53
EDC3-216ENST00000569561 PIK3C2GO75747 1445 aa24.57■■□□□ 1.52
EDC3-216ENST00000569561 PTCH1Q13635 1447 aa24.57■■□□□ 1.52
EDC3-216ENST00000569561 NRXN1Q9ULB1 1477 aa24.56■■□□□ 1.52
EDC3-216ENST00000569561 DCCP43146 1447 aa24.54■■□□□ 1.52
EDC3-216ENST00000569561 MYOM2P54296 1465 aa24.54■■□□□ 1.52
EDC3-216ENST00000569561 C19orf44Q9H6X5 657 aa24.54■■□□□ 1.52
EDC3-216ENST00000569561 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.54■■□□□ 1.52
EDC3-216ENST00000569561 ASXL1Q8IXJ9 1541 aa24.54■■□□□ 1.52
EDC3-216ENST00000569561 ROBO1Q9Y6N7 1651 aa24.53■■□□□ 1.52
EDC3-216ENST00000569561 SLAIN2Q9P270 581 aa24.52■■□□□ 1.52
EDC3-216ENST00000569561 ROBO2Q9HCK4 1378 aa24.52■■□□□ 1.52
EDC3-216ENST00000569561 ADGRL3Q9HAR2 1447 aa24.51■■□□□ 1.51
EDC3-216ENST00000569561 CADPS2Q86UW7 1296 aa24.49■■□□□ 1.51
EDC3-216ENST00000569561 TECPR2O15040 1411 aa24.48■■□□□ 1.51
EDC3-216ENST00000569561 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
EDC3-216ENST00000569561 NALCNQ8IZF0 1738 aa24.46■■□□□ 1.51
EDC3-216ENST00000569561 MST1RQ04912 1400 aa24.44■■□□□ 1.5
EDC3-216ENST00000569561 LRPPRCP42704 1394 aaKnown RBP24.44■■□□□ 1.5
EDC3-216ENST00000569561 ATF3P18847 181 aa24.43■■□□□ 1.5
EDC3-216ENST00000569561 C14orf93Q9H972 538 aaKnown RBP24.43■■□□□ 1.5
EDC3-216ENST00000569561 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
EDC3-216ENST00000569561 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
EDC3-216ENST00000569561 DISP3Q9P2K9 1392 aa24.42■■□□□ 1.5
EDC3-216ENST00000569561 MED1Q15648 1581 aaPredicted RBP24.42■■□□□ 1.5
EDC3-216ENST00000569561 KNDC1Q76NI1 1749 aa24.4■■□□□ 1.5
EDC3-216ENST00000569561 TMEM132EQ6IEE7 984 aa24.39■■□□□ 1.49
EDC3-216ENST00000569561 LAMC1P11047 1609 aa24.39■■□□□ 1.49
EDC3-216ENST00000569561 AHDC1Q5TGY3 1603 aaPredicted RBP24.39■■□□□ 1.49
EDC3-216ENST00000569561 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
EDC3-216ENST00000569561 CFAP70Q5T0N1 1121 aa24.38■■□□□ 1.49
EDC3-216ENST00000569561 BRINP3Q76B58 766 aa24.38■■□□□ 1.49
EDC3-216ENST00000569561 COL16A1Q07092 1604 aaPredicted RBP24.37■■□□□ 1.49
EDC3-216ENST00000569561 ADGRB1O14514 1584 aa24.36■■□□□ 1.49
EDC3-216ENST00000569561 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
EDC3-216ENST00000569561 STAC3Q96MF2 364 aa24.34■■□□□ 1.49
EDC3-216ENST00000569561 C1orf167Q5SNV9 1468 aa24.33■■□□□ 1.49
EDC3-216ENST00000569561 PHLPP1O60346 1717 aa24.33■■□□□ 1.49
EDC3-216ENST00000569561 CDC42BPGQ6DT37 1551 aa24.33■■□□□ 1.48
EDC3-216ENST00000569561 DCAF11Q8TEB1 546 aa24.32■■□□□ 1.48
EDC3-216ENST00000569561 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
EDC3-216ENST00000569561 STK26Q9P289 416 aa24.32■■□□□ 1.48
EDC3-216ENST00000569561 WAPLQ7Z5K2 1190 aa24.31■■□□□ 1.48
EDC3-216ENST00000569561 ILDR2Q71H61 639 aa24.29■■□□□ 1.48
EDC3-216ENST00000569561 DLC1Q96QB1 1528 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms