RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
SMG1-216ENST00000569122 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMG1-216ENST00000569122 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
SMG1-216ENST00000569122 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
SMG1-216ENST00000569122 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
SMG1-216ENST00000569122 PHLPP1O60346 1717 aa13.65□□□□□ -0.22
SMG1-216ENST00000569122 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
SMG1-216ENST00000569122 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
SMG1-216ENST00000569122 NUTM2BA6NNL0 878 aaPredicted RBP13.64□□□□□ -0.23
SMG1-216ENST00000569122 NUTM2EB1AL46 878 aaPredicted RBP13.64□□□□□ -0.23
SMG1-216ENST00000569122 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
SMG1-216ENST00000569122 NUTM2AQ8IVF1 878 aaPredicted RBP13.64□□□□□ -0.23
SMG1-216ENST00000569122 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
SMG1-216ENST00000569122 LRRC59Q96AG4 307 aaKnown RBP13.63□□□□□ -0.23
SMG1-216ENST00000569122 NGLY1Q96IV0 654 aa13.63□□□□□ -0.23
SMG1-216ENST00000569122 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
SMG1-216ENST00000569122 LRP6O75581 1613 aa13.63□□□□□ -0.23
SMG1-216ENST00000569122 NOS1P29475 1434 aa13.63□□□□□ -0.23
SMG1-216ENST00000569122 AFF2P51816 1311 aa13.63□□□□□ -0.23
SMG1-216ENST00000569122 CEP152O94986 1710 aa13.62□□□□□ -0.23
SMG1-216ENST00000569122 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
SMG1-216ENST00000569122 ANKRD30AQ9BXX3 1397 aa13.62□□□□□ -0.23
SMG1-216ENST00000569122 QTRT2Q9H974 415 aaKnown RBP13.62□□□□□ -0.23
SMG1-216ENST00000569122 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
SMG1-216ENST00000569122 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
SMG1-216ENST00000569122 ADGRB3O60242 1522 aa13.6□□□□□ -0.23
SMG1-216ENST00000569122 ABCC5O15440 1437 aa13.6□□□□□ -0.23
SMG1-216ENST00000569122 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
SMG1-216ENST00000569122 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
SMG1-216ENST00000569122 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
SMG1-216ENST00000569122 CFAP65Q6ZU64 1925 aaKnown RBP13.6□□□□□ -0.23
SMG1-216ENST00000569122 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
SMG1-216ENST00000569122 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
SMG1-216ENST00000569122 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
SMG1-216ENST00000569122 RPRD2Q5VT52 1461 aaKnown RBP13.58□□□□□ -0.24
SMG1-216ENST00000569122 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
SMG1-216ENST00000569122 APLP2Q06481 763 aa13.57□□□□□ -0.24
SMG1-216ENST00000569122 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
SMG1-216ENST00000569122 ATAD2Q6PL18 1390 aa13.57□□□□□ -0.24
SMG1-216ENST00000569122 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
SMG1-216ENST00000569122 SETD5Q9C0A6 1442 aa13.56□□□□□ -0.24
SMG1-216ENST00000569122 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
SMG1-216ENST00000569122 CCDC125Q86Z20 511 aa13.56□□□□□ -0.24
SMG1-216ENST00000569122 AMOTL2Q9Y2J4 779 aa13.56□□□□□ -0.24
SMG1-216ENST00000569122 DCCP43146 1447 aa13.56□□□□□ -0.24
SMG1-216ENST00000569122 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
SMG1-216ENST00000569122 DAPK1P53355 1430 aa13.55□□□□□ -0.24
SMG1-216ENST00000569122 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
SMG1-216ENST00000569122 TRPC5Q9UL62 973 aaPredicted RBP13.52□□□□□ -0.25
SMG1-216ENST00000569122 RGS12O14924 1447 aa13.52□□□□□ -0.25
SMG1-216ENST00000569122 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
SMG1-216ENST00000569122 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
SMG1-216ENST00000569122 ADAMTS13Q76LX8 1427 aa13.5□□□□□ -0.25
SMG1-216ENST00000569122 USP21Q9UK80 565 aa13.49□□□□□ -0.25
SMG1-216ENST00000569122 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
SMG1-216ENST00000569122 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
SMG1-216ENST00000569122 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
SMG1-216ENST00000569122 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
SMG1-216ENST00000569122 TRPM2O94759 1503 aa13.47□□□□□ -0.25
SMG1-216ENST00000569122 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
SMG1-216ENST00000569122 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
SMG1-216ENST00000569122 MST1RQ04912 1400 aa13.46□□□□□ -0.26
SMG1-216ENST00000569122 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.26
SMG1-216ENST00000569122 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
SMG1-216ENST00000569122 TMEM131LA2VDJ0 1609 aa13.43□□□□□ -0.26
SMG1-216ENST00000569122 PTPRUQ92729 1446 aa13.43□□□□□ -0.26
SMG1-216ENST00000569122 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
SMG1-216ENST00000569122 CROCC2H7BZ55 1655 aa13.42□□□□□ -0.26
SMG1-216ENST00000569122 DDX17Q92841 729 aaKnown RBP13.41□□□□□ -0.26
SMG1-216ENST00000569122 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
SMG1-216ENST00000569122 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
SMG1-216ENST00000569122 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
SMG1-216ENST00000569122 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
SMG1-216ENST00000569122 ADGRL3Q9HAR2 1447 aa13.39□□□□□ -0.27
SMG1-216ENST00000569122 ATRNO75882 1429 aa13.39□□□□□ -0.27
SMG1-216ENST00000569122 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
SMG1-216ENST00000569122 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
SMG1-216ENST00000569122 METP08581 1390 aa13.36□□□□□ -0.27
SMG1-216ENST00000569122 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
SMG1-216ENST00000569122 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
SMG1-216ENST00000569122 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
SMG1-216ENST00000569122 BLMP54132 1417 aaPredicted RBP13.35□□□□□ -0.27
SMG1-216ENST00000569122 NUP155O75694 1391 aa13.34□□□□□ -0.27
SMG1-216ENST00000569122 ORAI2Q96SN7 254 aa13.34□□□□□ -0.27
SMG1-216ENST00000569122 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
SMG1-216ENST00000569122 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
SMG1-216ENST00000569122 LRPPRCP42704 1394 aaKnown RBP13.32□□□□□ -0.28
SMG1-216ENST00000569122 UNC13BO14795 1591 aa13.32□□□□□ -0.28
SMG1-216ENST00000569122 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
SMG1-216ENST00000569122 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
SMG1-216ENST00000569122 ROCK1Q13464 1354 aa13.31□□□□□ -0.28
SMG1-216ENST00000569122 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
SMG1-216ENST00000569122 BCL9LQ86UU0 1499 aa13.3□□□□□ -0.28
SMG1-216ENST00000569122 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
SMG1-216ENST00000569122 EP400Q96L91 3159 aa13.29□□□□□ -0.28
SMG1-216ENST00000569122 MYO5BQ9ULV0 1848 aa13.29□□□□□ -0.28
SMG1-216ENST00000569122 MYOM2P54296 1465 aa13.28□□□□□ -0.28
SMG1-216ENST00000569122 BAG6P46379 1132 aa13.27□□□□□ -0.29
SMG1-216ENST00000569122 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.29
SMG1-216ENST00000569122 HFM1A2PYH4 1435 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms